data_1K6U # _model_server_result.job_id doDXTYvtSGlNU07cGDaJKQ _model_server_result.datetime_utc '2024-11-16 11:39:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1k6u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":66}' # _entry.id 1K6U # _exptl.entry_id 1K6U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1K6U _cell.length_a 51.904 _cell.length_b 51.904 _cell.length_c 42.896 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1K6U _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 5 A CYS 5 1_555 A SG CYS 55 A CYS 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf2 A SG CYS 14 A CYS 14 1_555 A SG CYS 38 A CYS 38 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.908 ? disulf ? disulf3 A SG CYS 14 A CYS 14 1_555 A SG CYS 38 A CYS 38 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.176 ? disulf ? disulf4 A SG CYS 30 A CYS 30 1_555 A SG CYS 51 A CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? covale ? covale1 A N ARG 1 A ARG 1 1_555 A C ALA 58 A ALA 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 1K6U _atom_sites.fract_transf_matrix[1][1] 0.019266 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019266 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023312 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 59 1 SO4 SO4 . C 2 SO4 A 1 60 2 SO4 SO4 . D 2 SO4 A 1 61 4 SO4 SO4 . E 2 SO4 A 1 62 6 SO4 SO4 . F 2 SO4 A 1 63 8 SO4 SO4 . G 2 SO4 A 1 64 7 SO4 SO4 . H 2 SO4 A 1 65 5 SO4 SO2 . I 3 EDO A 1 66 21 EDO EDO . J 3 EDO A 1 67 22 EDO EDO . K 4 HOH A 1 101 101 HOH HOH . K 4 HOH A 2 102 102 HOH HOH . K 4 HOH A 3 103 103 HOH HOH . K 4 HOH A 4 104 104 HOH HOH . K 4 HOH A 5 105 105 HOH HOH . K 4 HOH A 6 106 106 HOH HOH . K 4 HOH A 7 107 107 HOH HOH . K 4 HOH A 8 108 108 HOH HOH . K 4 HOH A 9 109 109 HOH HOH . K 4 HOH A 10 110 110 HOH HOH . K 4 HOH A 11 111 111 HOH HOH . K 4 HOH A 12 112 112 HOH HOH . K 4 HOH A 13 113 113 HOH HOH . K 4 HOH A 14 114 114 HOH HOH . K 4 HOH A 15 115 115 HOH HOH . K 4 HOH A 16 116 116 HOH HOH . K 4 HOH A 17 117 117 HOH HOH . K 4 HOH A 18 118 118 HOH HOH . K 4 HOH A 19 119 119 HOH HOH . K 4 HOH A 20 120 120 HOH HOH . K 4 HOH A 21 121 121 HOH HOH . K 4 HOH A 22 122 122 HOH HOH . K 4 HOH A 23 123 123 HOH HOH . K 4 HOH A 24 124 124 HOH HOH . K 4 HOH A 25 125 125 HOH HOH . K 4 HOH A 26 126 126 HOH HOH . K 4 HOH A 27 127 127 HOH HOH . K 4 HOH A 28 128 128 HOH HOH . K 4 HOH A 29 129 129 HOH HOH . K 4 HOH A 30 130 130 HOH HOH . K 4 HOH A 31 131 131 HOH HOH . K 4 HOH A 32 132 132 HOH HOH . K 4 HOH A 33 133 133 HOH HOH . K 4 HOH A 34 134 134 HOH HOH . K 4 HOH A 35 135 135 HOH HOH . K 4 HOH A 36 136 136 HOH HOH . K 4 HOH A 37 137 137 HOH HOH . K 4 HOH A 38 138 138 HOH HOH . K 4 HOH A 39 139 139 HOH HOH . K 4 HOH A 40 140 140 HOH HOH . K 4 HOH A 41 141 141 HOH HOH . K 4 HOH A 42 142 142 HOH HOH . K 4 HOH A 43 143 143 HOH HOH . K 4 HOH A 44 144 144 HOH HOH . K 4 HOH A 45 145 145 HOH HOH . K 4 HOH A 46 146 146 HOH HOH . K 4 HOH A 47 147 147 HOH HOH . K 4 HOH A 48 148 148 HOH HOH . K 4 HOH A 49 149 149 HOH HOH . K 4 HOH A 50 150 150 HOH HOH . K 4 HOH A 51 151 151 HOH HOH . K 4 HOH A 52 152 152 HOH HOH . K 4 HOH A 53 153 153 HOH HOH . K 4 HOH A 54 154 154 HOH HOH . K 4 HOH A 55 155 155 HOH HOH . K 4 HOH A 56 156 156 HOH HOH . K 4 HOH A 57 157 157 HOH HOH . K 4 HOH A 58 158 158 HOH HOH . K 4 HOH A 59 159 159 HOH HOH . K 4 HOH A 60 160 160 HOH HOH . K 4 HOH A 61 161 161 HOH HOH . K 4 HOH A 62 162 162 HOH HOH . K 4 HOH A 63 163 163 HOH HOH . K 4 HOH A 64 164 164 HOH HOH . K 4 HOH A 65 165 165 HOH HOH . K 4 HOH A 66 166 166 HOH HOH . K 4 HOH A 67 167 167 HOH HOH . K 4 HOH A 68 168 168 HOH HOH . K 4 HOH A 69 169 169 HOH HOH . K 4 HOH A 70 170 170 HOH HOH . K 4 HOH A 71 171 171 HOH HOH . K 4 HOH A 72 172 172 HOH HOH . K 4 HOH A 73 173 173 HOH HOH . K 4 HOH A 74 174 174 HOH HOH . K 4 HOH A 75 175 175 HOH HOH . K 4 HOH A 76 176 176 HOH HOH . K 4 HOH A 77 177 177 HOH HOH . K 4 HOH A 78 178 178 HOH HOH . K 4 HOH A 79 179 179 HOH HOH . K 4 HOH A 80 180 180 HOH HOH . K 4 HOH A 81 181 181 HOH HOH . K 4 HOH A 82 182 182 HOH HOH . K 4 HOH A 83 183 183 HOH HOH . K 4 HOH A 84 184 184 HOH HOH . K 4 HOH A 85 185 185 HOH HOH . K 4 HOH A 86 186 186 HOH HOH . K 4 HOH A 87 187 187 HOH HOH . K 4 HOH A 88 188 188 HOH HOH . K 4 HOH A 89 189 189 HOH HOH . K 4 HOH A 90 190 190 HOH HOH . K 4 HOH A 91 191 191 HOH HOH . K 4 HOH A 92 192 192 HOH HOH . K 4 HOH A 93 193 193 HOH HOH . K 4 HOH A 94 194 194 HOH HOH . K 4 HOH A 95 195 195 HOH HOH . K 4 HOH A 96 196 196 HOH HOH . K 4 HOH A 97 197 197 HOH HOH . K 4 HOH A 98 198 198 HOH HOH . K 4 HOH A 99 199 199 HOH HOH . K 4 HOH A 100 200 200 HOH HOH . K 4 HOH A 101 201 201 HOH HOH . K 4 HOH A 102 202 202 HOH HOH . K 4 HOH A 103 203 203 HOH HOH . K 4 HOH A 104 204 204 HOH HOH . K 4 HOH A 105 205 205 HOH HOH . K 4 HOH A 106 206 206 HOH HOH . K 4 HOH A 107 207 207 HOH HOH . K 4 HOH A 108 208 208 HOH HOH . K 4 HOH A 109 209 209 HOH HOH . K 4 HOH A 110 210 210 HOH HOH . K 4 HOH A 111 211 211 HOH HOH . K 4 HOH A 112 212 212 HOH HOH . K 4 HOH A 113 213 213 HOH HOH . K 4 HOH A 114 214 214 HOH HOH . K 4 HOH A 115 215 215 HOH HOH . K 4 HOH A 116 216 216 HOH HOH . K 4 HOH A 117 217 217 HOH HOH . K 4 HOH A 118 218 218 HOH HOH . K 4 HOH A 119 219 219 HOH HOH . K 4 HOH A 120 220 220 HOH HOH . K 4 HOH A 121 221 221 HOH HOH . K 4 HOH A 122 222 222 HOH HOH . K 4 HOH A 123 223 223 HOH HOH . K 4 HOH A 124 224 224 HOH HOH . K 4 HOH A 125 225 225 HOH HOH . K 4 HOH A 126 226 226 HOH HOH . K 4 HOH A 127 227 227 HOH HOH . K 4 HOH A 128 228 228 HOH HOH . K 4 HOH A 129 229 229 HOH HOH . K 4 HOH A 130 230 230 HOH HOH . K 4 HOH A 131 231 231 HOH HOH . K 4 HOH A 132 232 232 HOH HOH . K 4 HOH A 133 233 233 HOH HOH . K 4 HOH A 134 234 234 HOH HOH . K 4 HOH A 135 235 235 HOH HOH . K 4 HOH A 136 236 236 HOH HOH . K 4 HOH A 137 237 237 HOH HOH . K 4 HOH A 138 238 238 HOH HOH . K 4 HOH A 139 239 239 HOH HOH . K 4 HOH A 140 240 240 HOH HOH . K 4 HOH A 141 241 241 HOH HOH . K 4 HOH A 142 242 242 HOH HOH . K 4 HOH A 143 244 244 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . I 3 39.534 9.18 24.227 1 40.86 ? C1 EDO 66 A 1 HETATM 2 O O1 EDO . . . I 3 38.438 8.252 24.492 0.85 45.78 ? O1 EDO 66 A 1 HETATM 3 C C2 EDO . . . I 3 40.328 9.344 25.478 0.77 38.26 ? C2 EDO 66 A 1 HETATM 4 O O2 EDO . . . I 3 39.923 10.435 26.366 0.98 19.13 ? O2 EDO 66 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #