data_1K74 # _model_server_result.job_id N2Z5v9IfUgKTPDmu_RUQ7g _model_server_result.datetime_utc '2025-06-22 14:52:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1k74 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":463}' # _entry.id 1K74 # _exptl.entry_id 1K74 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 300.435 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(9cis)-retinoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1K74 _cell.length_a 46.62 _cell.length_b 55.1 _cell.length_c 214.86 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1K74 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H28 O2' _chem_comp.formula_weight 300.435 _chem_comp.id 9CR _chem_comp.mon_nstd_flag . _chem_comp.name '(9cis)-retinoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C15 9CR doub 72 n n C15 C14 9CR sing 73 n n C15 O2 9CR sing 74 n n C14 C13 9CR doub 75 e n C13 C12 9CR sing 76 n n C13 C20 9CR sing 77 n n C12 C11 9CR doub 78 e n C11 C10 9CR sing 79 n n C18 C5 9CR sing 80 n n C10 C9 9CR doub 81 z n C9 C19 9CR sing 82 n n C9 C8 9CR sing 83 n n C8 C7 9CR doub 84 e n C5 C4 9CR sing 85 n n C5 C6 9CR doub 86 n n C4 C3 9CR sing 87 n n C7 C6 9CR sing 88 n n C6 C1 9CR sing 89 n n C3 C2 9CR sing 90 n n C1 C17 9CR sing 91 n n C1 C2 9CR sing 92 n n C1 C16 9CR sing 93 n n C2 H1 9CR sing 94 n n C2 H2 9CR sing 95 n n C3 H3 9CR sing 96 n n C3 H4 9CR sing 97 n n C4 H5 9CR sing 98 n n C4 H6 9CR sing 99 n n C7 H7 9CR sing 100 n n C8 H8 9CR sing 101 n n C10 H9 9CR sing 102 n n C11 H10 9CR sing 103 n n C12 H11 9CR sing 104 n n C14 H12 9CR sing 105 n n C16 H13 9CR sing 106 n n C16 H14 9CR sing 107 n n C16 H15 9CR sing 108 n n C17 H16 9CR sing 109 n n C17 H17 9CR sing 110 n n C17 H18 9CR sing 111 n n C18 H19 9CR sing 112 n n C18 H20 9CR sing 113 n n C18 H21 9CR sing 114 n n C19 H22 9CR sing 115 n n C19 H23 9CR sing 116 n n C19 H24 9CR sing 117 n n C20 H25 9CR sing 118 n n C20 H26 9CR sing 119 n n C20 H27 9CR sing 120 n n O2 H28 9CR sing 121 n n # _atom_sites.entry_id 1K74 _atom_sites.fract_transf_matrix[1][1] 0.02145 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018149 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004654 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 9CR A 1 463 1 9CR UNK . F 5 544 D 1 478 1 544 544 . G 6 HOH A 1 1 1 HOH HOH . G 6 HOH A 2 2 2 HOH HOH . G 6 HOH A 3 3 3 HOH HOH . G 6 HOH A 4 4 4 HOH HOH . G 6 HOH A 5 5 5 HOH HOH . G 6 HOH A 6 6 6 HOH HOH . G 6 HOH A 7 7 7 HOH HOH . G 6 HOH A 8 8 8 HOH HOH . G 6 HOH A 9 9 9 HOH HOH . G 6 HOH A 10 10 10 HOH HOH . G 6 HOH A 11 11 11 HOH HOH . G 6 HOH A 12 12 12 HOH HOH . G 6 HOH A 13 13 13 HOH HOH . G 6 HOH A 14 14 14 HOH HOH . G 6 HOH A 15 15 15 HOH HOH . G 6 HOH A 16 16 16 HOH HOH . G 6 HOH A 17 19 19 HOH HOH . G 6 HOH A 18 22 22 HOH HOH . G 6 HOH A 19 23 23 HOH HOH . G 6 HOH A 20 24 24 HOH HOH . G 6 HOH A 21 26 26 HOH HOH . G 6 HOH A 22 27 27 HOH HOH . G 6 HOH A 23 29 29 HOH HOH . G 6 HOH A 24 30 30 HOH HOH . G 6 HOH A 25 31 31 HOH HOH . G 6 HOH A 26 125 125 HOH HOH . G 6 HOH A 27 126 126 HOH HOH . G 6 HOH A 28 127 127 HOH HOH . G 6 HOH A 29 129 129 HOH HOH . G 6 HOH A 30 130 130 HOH HOH . G 6 HOH A 31 131 131 HOH HOH . G 6 HOH A 32 132 132 HOH HOH . G 6 HOH A 33 137 137 HOH HOH . G 6 HOH A 34 140 140 HOH HOH . G 6 HOH A 35 144 144 HOH HOH . G 6 HOH A 36 145 145 HOH HOH . G 6 HOH A 37 148 148 HOH HOH . G 6 HOH A 38 150 150 HOH HOH . G 6 HOH A 39 153 153 HOH HOH . G 6 HOH A 40 154 154 HOH HOH . G 6 HOH A 41 158 158 HOH HOH . G 6 HOH A 42 159 159 HOH HOH . G 6 HOH A 43 160 160 HOH HOH . G 6 HOH A 44 161 161 HOH HOH . G 6 HOH A 45 164 164 HOH HOH . G 6 HOH A 46 165 165 HOH HOH . G 6 HOH A 47 166 166 HOH HOH . G 6 HOH A 48 167 167 HOH HOH . G 6 HOH A 49 168 168 HOH HOH . G 6 HOH A 50 170 170 HOH HOH . G 6 HOH A 51 171 171 HOH HOH . G 6 HOH A 52 172 172 HOH HOH . G 6 HOH A 53 173 173 HOH HOH . G 6 HOH A 54 187 187 HOH HOH . G 6 HOH A 55 190 190 HOH HOH . G 6 HOH A 56 192 192 HOH HOH . G 6 HOH A 57 193 193 HOH HOH . G 6 HOH A 58 195 195 HOH HOH . G 6 HOH A 59 197 197 HOH HOH . G 6 HOH A 60 198 198 HOH HOH . G 6 HOH A 61 201 201 HOH HOH . G 6 HOH A 62 202 202 HOH HOH . G 6 HOH A 63 203 203 HOH HOH . G 6 HOH A 64 206 206 HOH HOH . G 6 HOH A 65 210 210 HOH HOH . G 6 HOH A 66 211 211 HOH HOH . G 6 HOH A 67 216 216 HOH HOH . H 6 HOH D 1 479 17 HOH HOH . H 6 HOH D 2 480 18 HOH HOH . H 6 HOH D 3 481 20 HOH HOH . H 6 HOH D 4 482 32 HOH HOH . H 6 HOH D 5 483 33 HOH HOH . H 6 HOH D 6 484 34 HOH HOH . H 6 HOH D 7 485 35 HOH HOH . H 6 HOH D 8 486 36 HOH HOH . H 6 HOH D 9 487 37 HOH HOH . H 6 HOH D 10 488 38 HOH HOH . H 6 HOH D 11 489 39 HOH HOH . H 6 HOH D 12 490 41 HOH HOH . H 6 HOH D 13 491 42 HOH HOH . H 6 HOH D 14 492 43 HOH HOH . H 6 HOH D 15 493 44 HOH HOH . H 6 HOH D 16 494 45 HOH HOH . H 6 HOH D 17 495 46 HOH HOH . H 6 HOH D 18 496 47 HOH HOH . H 6 HOH D 19 497 48 HOH HOH . H 6 HOH D 20 498 49 HOH HOH . H 6 HOH D 21 499 50 HOH HOH . H 6 HOH D 22 500 51 HOH HOH . H 6 HOH D 23 501 52 HOH HOH . H 6 HOH D 24 502 53 HOH HOH . H 6 HOH D 25 503 54 HOH HOH . H 6 HOH D 26 504 55 HOH HOH . H 6 HOH D 27 505 56 HOH HOH . H 6 HOH D 28 506 58 HOH HOH . H 6 HOH D 29 507 59 HOH HOH . H 6 HOH D 30 508 60 HOH HOH . H 6 HOH D 31 509 61 HOH HOH . H 6 HOH D 32 510 62 HOH HOH . H 6 HOH D 33 511 63 HOH HOH . H 6 HOH D 34 512 64 HOH HOH . H 6 HOH D 35 513 66 HOH HOH . H 6 HOH D 36 514 67 HOH HOH . H 6 HOH D 37 515 68 HOH HOH . H 6 HOH D 38 516 69 HOH HOH . H 6 HOH D 39 517 70 HOH HOH . H 6 HOH D 40 518 71 HOH HOH . H 6 HOH D 41 519 72 HOH HOH . H 6 HOH D 42 520 73 HOH HOH . H 6 HOH D 43 521 74 HOH HOH . H 6 HOH D 44 522 75 HOH HOH . H 6 HOH D 45 523 76 HOH HOH . H 6 HOH D 46 524 77 HOH HOH . H 6 HOH D 47 525 78 HOH HOH . H 6 HOH D 48 526 79 HOH HOH . H 6 HOH D 49 527 80 HOH HOH . H 6 HOH D 50 528 81 HOH HOH . H 6 HOH D 51 529 82 HOH HOH . H 6 HOH D 52 530 83 HOH HOH . H 6 HOH D 53 531 84 HOH HOH . H 6 HOH D 54 532 86 HOH HOH . H 6 HOH D 55 533 87 HOH HOH . H 6 HOH D 56 534 88 HOH HOH . H 6 HOH D 57 535 89 HOH HOH . H 6 HOH D 58 536 91 HOH HOH . H 6 HOH D 59 537 92 HOH HOH . H 6 HOH D 60 538 93 HOH HOH . H 6 HOH D 61 539 94 HOH HOH . H 6 HOH D 62 540 95 HOH HOH . H 6 HOH D 63 541 96 HOH HOH . H 6 HOH D 64 542 97 HOH HOH . H 6 HOH D 65 543 98 HOH HOH . H 6 HOH D 66 544 101 HOH HOH . H 6 HOH D 67 545 102 HOH HOH . H 6 HOH D 68 546 104 HOH HOH . H 6 HOH D 69 547 105 HOH HOH . H 6 HOH D 70 548 106 HOH HOH . H 6 HOH D 71 549 107 HOH HOH . H 6 HOH D 72 550 108 HOH HOH . H 6 HOH D 73 551 110 HOH HOH . H 6 HOH D 74 552 112 HOH HOH . H 6 HOH D 75 553 113 HOH HOH . H 6 HOH D 76 554 114 HOH HOH . H 6 HOH D 77 555 115 HOH HOH . H 6 HOH D 78 556 117 HOH HOH . H 6 HOH D 79 557 118 HOH HOH . H 6 HOH D 80 558 119 HOH HOH . H 6 HOH D 81 559 120 HOH HOH . H 6 HOH D 82 560 121 HOH HOH . H 6 HOH D 83 561 122 HOH HOH . H 6 HOH D 84 562 123 HOH HOH . H 6 HOH D 85 563 124 HOH HOH . H 6 HOH D 86 564 133 HOH HOH . H 6 HOH D 87 565 134 HOH HOH . H 6 HOH D 88 566 135 HOH HOH . H 6 HOH D 89 567 136 HOH HOH . H 6 HOH D 90 568 138 HOH HOH . H 6 HOH D 91 569 139 HOH HOH . H 6 HOH D 92 570 141 HOH HOH . H 6 HOH D 93 571 143 HOH HOH . H 6 HOH D 94 572 146 HOH HOH . H 6 HOH D 95 573 147 HOH HOH . H 6 HOH D 96 574 149 HOH HOH . H 6 HOH D 97 575 151 HOH HOH . H 6 HOH D 98 576 152 HOH HOH . H 6 HOH D 99 577 155 HOH HOH . H 6 HOH D 100 578 156 HOH HOH . H 6 HOH D 101 579 157 HOH HOH . H 6 HOH D 102 580 162 HOH HOH . H 6 HOH D 103 581 163 HOH HOH . H 6 HOH D 104 582 169 HOH HOH . H 6 HOH D 105 583 175 HOH HOH . H 6 HOH D 106 584 176 HOH HOH . H 6 HOH D 107 585 177 HOH HOH . H 6 HOH D 108 586 178 HOH HOH . H 6 HOH D 109 587 179 HOH HOH . H 6 HOH D 110 588 180 HOH HOH . H 6 HOH D 111 589 181 HOH HOH . H 6 HOH D 112 590 182 HOH HOH . H 6 HOH D 113 591 183 HOH HOH . H 6 HOH D 114 592 184 HOH HOH . H 6 HOH D 115 593 185 HOH HOH . H 6 HOH D 116 594 186 HOH HOH . H 6 HOH D 117 595 188 HOH HOH . H 6 HOH D 118 596 189 HOH HOH . H 6 HOH D 119 597 191 HOH HOH . H 6 HOH D 120 598 194 HOH HOH . H 6 HOH D 121 599 196 HOH HOH . H 6 HOH D 122 600 199 HOH HOH . H 6 HOH D 123 601 200 HOH HOH . H 6 HOH D 124 602 204 HOH HOH . H 6 HOH D 125 603 205 HOH HOH . H 6 HOH D 126 604 207 HOH HOH . H 6 HOH D 127 605 208 HOH HOH . H 6 HOH D 128 606 209 HOH HOH . H 6 HOH D 129 607 212 HOH HOH . H 6 HOH D 130 608 213 HOH HOH . H 6 HOH D 131 609 214 HOH HOH . H 6 HOH D 132 610 215 HOH HOH . H 6 HOH D 133 611 217 HOH HOH . I 6 HOH B 1 28 28 HOH HOH . I 6 HOH B 2 174 174 HOH HOH . J 6 HOH E 1 40 40 HOH HOH . J 6 HOH E 2 85 85 HOH HOH . J 6 HOH E 3 109 109 HOH HOH . J 6 HOH E 4 116 116 HOH HOH . J 6 HOH E 5 142 142 HOH HOH . J 6 HOH E 6 218 218 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 9CR . . . E 4 16.14 14.586 41.336 1 51.21 ? C1 9CR 463 A 1 HETATM 2 C C2 9CR . . . E 4 17.739 14.607 41.192 1 52.16 ? C2 9CR 463 A 1 HETATM 3 C C3 9CR . . . E 4 18.553 14.967 42.5 1 52.29 ? C3 9CR 463 A 1 HETATM 4 C C4 9CR . . . E 4 18.047 16.298 43.132 1 51.98 ? C4 9CR 463 A 1 HETATM 5 C C5 9CR . . . E 4 16.497 16.399 43.344 1 52.08 ? C5 9CR 463 A 1 HETATM 6 C C6 9CR . . . E 4 15.526 15.607 42.509 1 50.3 ? C6 9CR 463 A 1 HETATM 7 C C7 9CR . . . E 4 14.065 15.655 42.641 1 46.69 ? C7 9CR 463 A 1 HETATM 8 C C8 9CR . . . E 4 13.265 16.327 43.538 1 43.13 ? C8 9CR 463 A 1 HETATM 9 C C9 9CR . . . E 4 11.854 16.429 43.599 1 41.01 ? C9 9CR 463 A 1 HETATM 10 C C10 9CR . . . E 4 11.249 17.104 44.662 1 38.55 ? C10 9CR 463 A 1 HETATM 11 C C11 9CR . . . E 4 11.907 17.683 45.71 1 35.62 ? C11 9CR 463 A 1 HETATM 12 C C12 9CR . . . E 4 11.261 18.305 46.727 1 34.09 ? C12 9CR 463 A 1 HETATM 13 C C13 9CR . . . E 4 11.876 18.871 47.843 1 34.96 ? C13 9CR 463 A 1 HETATM 14 C C14 9CR . . . E 4 10.996 19.454 48.745 1 34.07 ? C14 9CR 463 A 1 HETATM 15 C C15 9CR . . . E 4 11.292 20.164 50.075 1 33.64 ? C15 9CR 463 A 1 HETATM 16 C C16 9CR . . . E 4 15.759 13.092 41.694 1 52 ? C16 9CR 463 A 1 HETATM 17 C C17 9CR . . . E 4 15.572 14.813 39.95 1 51.92 ? C17 9CR 463 A 1 HETATM 18 C C18 9CR . . . E 4 16.152 17.383 44.456 1 53.94 ? C18 9CR 463 A 1 HETATM 19 C C19 9CR . . . E 4 10.921 15.821 42.56 1 40.59 ? C19 9CR 463 A 1 HETATM 20 C C20 9CR . . . E 4 13.439 18.851 48.078 1 35.38 ? C20 9CR 463 A 1 HETATM 21 O O1 9CR . . . E 4 10.472 20.977 50.516 1 35.62 ? O1 9CR 463 A 1 HETATM 22 O O2 9CR . . . E 4 12.342 19.917 50.693 1 38.77 ? O2 9CR 463 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 236 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 22 #