data_1K96
#
_model_server_result.job_id            5VLw_EpvYgPS5v4E8vhjMw 
_model_server_result.datetime_utc      '2024-11-04 23:19:39' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1k96 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":95}' 
#
_entry.id    1K96 
#
_exptl.entry_id    1K96 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            BETA-MERCAPTOETHANOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          110.44 
_cell.angle_gamma         90 
_cell.entry_id            1K96 
_cell.length_a            45.18 
_cell.length_b            39.23 
_cell.length_c            48.11 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1K96 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 3 A CYS 3 1_555 D S2 BME . A BME 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
metalc ? metalc1 A O SER 20 A SER 20 1_555 B CA CA . A CA 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? 
metalc ? metalc2 A O GLU 23 A GLU 23 1_555 B CA CA . A CA 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? 
metalc ? metalc3 A O ASP 25 A ASP 25 1_555 B CA CA . A CA 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? 
metalc ? metalc4 A O THR 28 A THR 28 1_555 B CA CA . A CA 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? 
metalc ? metalc5 A OE2 GLU 33 A GLU 33 1_555 B CA CA . A CA 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.628 ? 
metalc ? metalc6 A OE1 GLU 33 A GLU 33 1_555 B CA CA . A CA 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? 
metalc ? metalc7 A OD1 ASP 61 A ASP 61 1_555 C CA CA . A CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? 
metalc ? metalc8 A OD1 ASN 63 A ASN 63 1_555 C CA CA . A CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? 
metalc ? metalc9 A OD1 ASP 65 A ASP 65 1_555 C CA CA . A CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? 
metalc ? metalc10 A O GLU 67 A GLU 67 1_555 C CA CA . A CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? 
metalc ? metalc11 A OE1 GLU 72 A GLU 72 1_555 C CA CA . A CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? 
metalc ? metalc12 A OE2 GLU 72 A GLU 72 1_555 C CA CA . A CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.561 ? 
metalc ? metalc13 B CA CA . A CA 91 1_555 E O HOH . A HOH 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? 
metalc ? metalc14 C CA CA . A CA 92 1_555 E O HOH . A HOH 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.855 ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                BME 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              BETA-MERCAPTOETHANOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 BME sing 70 n n 
C1 O1 BME sing 71 n n 
C1 H11 BME sing 72 n n 
C1 H12 BME sing 73 n n 
C2 S2 BME sing 74 n n 
C2 H21 BME sing 75 n n 
C2 H22 BME sing 76 n n 
O1 HO1 BME sing 77 n n 
S2 HS2 BME sing 78 n n 
#
_atom_sites.entry_id                     1K96 
_atom_sites.fract_transf_matrix[1][1]    0.022134 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.008248 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.025491 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.022182 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CA A 1 91 91 CA CA . 
C 2 CA A 1 92 92 CA CA . 
D 3 BME A 1 95 95 BME BME . 
E 4 HOH A 1 96 1 HOH HOH . 
E 4 HOH A 2 97 2 HOH HOH . 
E 4 HOH A 3 98 3 HOH HOH . 
E 4 HOH A 4 99 4 HOH HOH . 
E 4 HOH A 5 100 5 HOH HOH . 
E 4 HOH A 6 101 6 HOH HOH . 
E 4 HOH A 7 102 7 HOH HOH . 
E 4 HOH A 8 103 8 HOH HOH . 
E 4 HOH A 9 104 9 HOH HOH . 
E 4 HOH A 10 105 10 HOH HOH . 
E 4 HOH A 11 106 11 HOH HOH . 
E 4 HOH A 12 107 12 HOH HOH . 
E 4 HOH A 13 108 13 HOH HOH . 
E 4 HOH A 14 109 14 HOH HOH . 
E 4 HOH A 15 110 15 HOH HOH . 
E 4 HOH A 16 111 16 HOH HOH . 
E 4 HOH A 17 112 17 HOH HOH . 
E 4 HOH A 18 113 18 HOH HOH . 
E 4 HOH A 19 114 19 HOH HOH . 
E 4 HOH A 20 115 20 HOH HOH . 
E 4 HOH A 21 116 21 HOH HOH . 
E 4 HOH A 22 117 22 HOH HOH . 
E 4 HOH A 23 118 23 HOH HOH . 
E 4 HOH A 24 119 24 HOH HOH . 
E 4 HOH A 25 120 25 HOH HOH . 
E 4 HOH A 26 121 26 HOH HOH . 
E 4 HOH A 27 122 27 HOH HOH . 
E 4 HOH A 28 123 28 HOH HOH . 
E 4 HOH A 29 124 29 HOH HOH . 
E 4 HOH A 30 125 30 HOH HOH . 
E 4 HOH A 31 126 31 HOH HOH . 
E 4 HOH A 32 127 32 HOH HOH . 
E 4 HOH A 33 128 33 HOH HOH . 
E 4 HOH A 34 129 34 HOH HOH . 
E 4 HOH A 35 130 35 HOH HOH . 
E 4 HOH A 36 131 36 HOH HOH . 
E 4 HOH A 37 132 37 HOH HOH . 
E 4 HOH A 38 133 38 HOH HOH . 
E 4 HOH A 39 134 39 HOH HOH . 
E 4 HOH A 40 135 40 HOH HOH . 
E 4 HOH A 41 136 41 HOH HOH . 
E 4 HOH A 42 137 42 HOH HOH . 
E 4 HOH A 43 138 43 HOH HOH . 
E 4 HOH A 44 139 44 HOH HOH . 
E 4 HOH A 45 140 45 HOH HOH . 
E 4 HOH A 46 141 46 HOH HOH . 
E 4 HOH A 47 142 47 HOH HOH . 
E 4 HOH A 48 143 48 HOH HOH . 
E 4 HOH A 49 144 49 HOH HOH . 
E 4 HOH A 50 145 50 HOH HOH . 
E 4 HOH A 51 146 51 HOH HOH . 
E 4 HOH A 52 147 52 HOH HOH . 
E 4 HOH A 53 148 53 HOH HOH . 
E 4 HOH A 54 149 54 HOH HOH . 
E 4 HOH A 55 150 55 HOH HOH . 
E 4 HOH A 56 151 56 HOH HOH . 
E 4 HOH A 57 152 57 HOH HOH . 
E 4 HOH A 58 153 58 HOH HOH . 
E 4 HOH A 59 154 59 HOH HOH . 
E 4 HOH A 60 155 60 HOH HOH . 
E 4 HOH A 61 156 61 HOH HOH . 
E 4 HOH A 62 157 62 HOH HOH . 
E 4 HOH A 63 158 63 HOH HOH . 
E 4 HOH A 64 159 64 HOH HOH . 
E 4 HOH A 65 160 65 HOH HOH . 
E 4 HOH A 66 161 66 HOH HOH . 
E 4 HOH A 67 162 67 HOH HOH . 
E 4 HOH A 68 163 68 HOH HOH . 
E 4 HOH A 69 164 69 HOH HOH . 
E 4 HOH A 70 165 70 HOH HOH . 
E 4 HOH A 71 166 71 HOH HOH . 
E 4 HOH A 72 167 72 HOH HOH . 
E 4 HOH A 73 168 73 HOH HOH . 
E 4 HOH A 74 169 74 HOH HOH . 
E 4 HOH A 75 170 75 HOH HOH . 
E 4 HOH A 76 171 76 HOH HOH . 
E 4 HOH A 77 172 77 HOH HOH . 
E 4 HOH A 78 173 78 HOH HOH . 
E 4 HOH A 79 174 79 HOH HOH . 
E 4 HOH A 80 175 80 HOH HOH . 
E 4 HOH A 81 176 81 HOH HOH . 
E 4 HOH A 82 177 82 HOH HOH . 
E 4 HOH A 83 178 83 HOH HOH . 
E 4 HOH A 84 179 84 HOH HOH . 
E 4 HOH A 85 180 85 HOH HOH . 
E 4 HOH A 86 181 86 HOH HOH . 
E 4 HOH A 87 182 87 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 BME . . . D 3 11.356 -11.302 11.099 1 26.92 ? C1 BME 95 A 1 
HETATM 2 C C2 BME . . . D 3 10.601 -12.296 10.211 1 26.97 ? C2 BME 95 A 1 
HETATM 3 O O1 BME . . . D 3 12.597 -11.273 11.107 1 29.79 ? O1 BME 95 A 1 
HETATM 4 S S2 BME . . . D 3 11.014 -12.228 8.451 1 26.93 ? S2 BME 95 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#