data_1K9P # _model_server_result.job_id DqodAxqv8FEfRVWk43M29w _model_server_result.datetime_utc '2024-12-26 16:53:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1k9p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":95}' # _entry.id 1K9P # _exptl.entry_id 1K9P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-MERCAPTOETHANOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1K9P _cell.length_a 37.444 _cell.length_b 47.982 _cell.length_c 82.984 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1K9P _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_556 x,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 82.984 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 3 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 3 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id S2 _struct_conn.ptnr2_label_comp_id BME _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id BME _struct_conn.ptnr2_auth_seq_id 95 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.019 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id BME _chem_comp.mon_nstd_flag . _chem_comp.name BETA-MERCAPTOETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BME sing 70 n n C1 O1 BME sing 71 n n C1 H11 BME sing 72 n n C1 H12 BME sing 73 n n C2 S2 BME sing 74 n n C2 H21 BME sing 75 n n C2 H22 BME sing 76 n n O1 HO1 BME sing 77 n n S2 HS2 BME sing 78 n n # _atom_sites.entry_id 1K9P _atom_sites.fract_transf_matrix[1][1] 0.026707 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020841 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012051 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BME A 1 95 95 BME BME . C 3 HOH A 1 96 1 HOH HOH . C 3 HOH A 2 97 2 HOH HOH . C 3 HOH A 3 98 3 HOH HOH . C 3 HOH A 4 99 4 HOH HOH . C 3 HOH A 5 100 5 HOH HOH . C 3 HOH A 6 101 6 HOH HOH . C 3 HOH A 7 102 7 HOH HOH . C 3 HOH A 8 103 8 HOH HOH . C 3 HOH A 9 104 9 HOH HOH . C 3 HOH A 10 105 10 HOH HOH . C 3 HOH A 11 106 11 HOH HOH . C 3 HOH A 12 107 12 HOH HOH . C 3 HOH A 13 108 13 HOH HOH . C 3 HOH A 14 109 14 HOH HOH . C 3 HOH A 15 110 15 HOH HOH . C 3 HOH A 16 111 16 HOH HOH . C 3 HOH A 17 112 17 HOH HOH . C 3 HOH A 18 113 18 HOH HOH . C 3 HOH A 19 114 19 HOH HOH . C 3 HOH A 20 115 20 HOH HOH . C 3 HOH A 21 116 21 HOH HOH . C 3 HOH A 22 117 22 HOH HOH . C 3 HOH A 23 118 23 HOH HOH . C 3 HOH A 24 119 24 HOH HOH . C 3 HOH A 25 120 25 HOH HOH . C 3 HOH A 26 121 26 HOH HOH . C 3 HOH A 27 122 27 HOH HOH . C 3 HOH A 28 123 28 HOH HOH . C 3 HOH A 29 124 29 HOH HOH . C 3 HOH A 30 125 30 HOH HOH . C 3 HOH A 31 126 31 HOH HOH . C 3 HOH A 32 127 32 HOH HOH . C 3 HOH A 33 128 33 HOH HOH . C 3 HOH A 34 129 34 HOH HOH . C 3 HOH A 35 130 35 HOH HOH . C 3 HOH A 36 131 36 HOH HOH . C 3 HOH A 37 132 37 HOH HOH . C 3 HOH A 38 133 38 HOH HOH . C 3 HOH A 39 134 39 HOH HOH . C 3 HOH A 40 135 40 HOH HOH . C 3 HOH A 41 136 41 HOH HOH . C 3 HOH A 42 137 42 HOH HOH . C 3 HOH A 43 138 43 HOH HOH . C 3 HOH A 44 139 44 HOH HOH . C 3 HOH A 45 140 45 HOH HOH . C 3 HOH A 46 141 46 HOH HOH . C 3 HOH A 47 142 47 HOH HOH . C 3 HOH A 48 143 48 HOH HOH . C 3 HOH A 49 144 49 HOH HOH . C 3 HOH A 50 145 50 HOH HOH . C 3 HOH A 51 146 51 HOH HOH . C 3 HOH A 52 147 52 HOH HOH . C 3 HOH A 53 148 53 HOH HOH . C 3 HOH A 54 149 54 HOH HOH . C 3 HOH A 55 150 55 HOH HOH . C 3 HOH A 56 151 56 HOH HOH . C 3 HOH A 57 152 57 HOH HOH . C 3 HOH A 58 153 58 HOH HOH . C 3 HOH A 59 154 59 HOH HOH . C 3 HOH A 60 155 60 HOH HOH . C 3 HOH A 61 156 61 HOH HOH . C 3 HOH A 62 157 62 HOH HOH . C 3 HOH A 63 158 63 HOH HOH . C 3 HOH A 64 159 64 HOH HOH . C 3 HOH A 65 160 65 HOH HOH . C 3 HOH A 66 161 66 HOH HOH . C 3 HOH A 67 162 67 HOH HOH . C 3 HOH A 68 163 68 HOH HOH . C 3 HOH A 69 164 69 HOH HOH . C 3 HOH A 70 165 70 HOH HOH . C 3 HOH A 71 166 71 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BME . . . B 2 -7.17 -4.904 55.141 1 42.43 ? C1 BME 95 A 1 HETATM 2 C C2 BME . . . B 2 -6.735 -4.618 53.667 1 41.81 ? C2 BME 95 A 1 HETATM 3 O O1 BME . . . B 2 -8.327 -5.192 55.406 1 45.05 ? O1 BME 95 A 1 HETATM 4 S S2 BME . . . B 2 -7.655 -5.42 52.299 1 37.46 ? S2 BME 95 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #