data_1KBO # _model_server_result.job_id b1TC6ICibFwRtPPVVT1Kzw _model_server_result.datetime_utc '2025-01-05 07:37:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1kbo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":703}' # _entry.id 1KBO # _exptl.entry_id 1KBO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 311.332 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-METHOXY-1,2-DIMETHYL-3-(PHENOXYMETHYL)INDOLE-4,7-DIONE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 76.8 _cell.angle_beta 76.93 _cell.angle_gamma 86.28 _cell.entry_id 1KBO _cell.length_a 55.636 _cell.length_b 57.026 _cell.length_c 96.878 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KBO _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,I,J,M,O 1 1 B,D,G,H,K,L,N,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 I N N ? 2 K N N # _chem_comp.formula 'C18 H17 N O4' _chem_comp.formula_weight 311.332 _chem_comp.id 340 _chem_comp.mon_nstd_flag . _chem_comp.name 5-METHOXY-1,2-DIMETHYL-3-(PHENOXYMETHYL)INDOLE-4,7-DIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 340 sing 1 n n C1 C6 340 doub 2 n n C1 H11 340 sing 3 n n C2 C3 340 sing 4 n n C2 O11 340 doub 5 n n C3 C4 340 doub 6 n y C3 N7 340 sing 7 n y C4 C5 340 sing 8 n n C4 C9 340 sing 9 n y C5 C6 340 sing 10 n n C5 O10 340 doub 11 n n C6 O44 340 sing 12 n n N7 C8 340 sing 13 n y N7 C12 340 sing 14 n n C8 C9 340 doub 15 n y C8 C37 340 sing 16 n n C9 C19 340 sing 17 n n C12 H121 340 sing 18 n n C12 H122 340 sing 19 n n C12 H123 340 sing 20 n n C19 O20 340 sing 21 n n C19 H191 340 sing 22 n n C19 H192 340 sing 23 n n O20 C24 340 sing 24 n n C24 C25 340 doub 25 n y C24 C29 340 sing 26 n y C25 C26 340 sing 27 n y C25 H251 340 sing 28 n n C26 C27 340 doub 29 n y C26 H261 340 sing 30 n n C27 C28 340 sing 31 n y C27 H271 340 sing 32 n n C28 C29 340 doub 33 n y C28 H281 340 sing 34 n n C29 H291 340 sing 35 n n C37 H371 340 sing 36 n n C37 H372 340 sing 37 n n C37 H373 340 sing 38 n n O44 C45 340 sing 39 n n C45 H451 340 sing 40 n n C45 H452 340 sing 41 n n C45 H453 340 sing 42 n n # _atom_sites.entry_id 1KBO _atom_sites.fract_transf_matrix[1][1] 0.017974 _atom_sites.fract_transf_matrix[1][2] -0.001168 _atom_sites.fract_transf_matrix[1][3] -0.004014 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017573 _atom_sites.fract_transf_matrix[2][3] -0.003961 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010863 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 340 A 1 703 703 340 340 . F 3 FAD A 1 601 601 FAD FAD . G 2 340 B 1 704 704 340 340 . H 3 FAD B 1 602 602 FAD FAD . I 2 340 C 1 701 701 340 340 . J 3 FAD C 1 603 603 FAD FAD . K 2 340 D 1 702 702 340 340 . L 3 FAD D 1 604 604 FAD FAD . M 4 HOH A 1 704 13 HOH HOH . M 4 HOH A 2 705 14 HOH HOH . M 4 HOH A 3 706 17 HOH HOH . M 4 HOH A 4 707 18 HOH HOH . M 4 HOH A 5 708 28 HOH HOH . M 4 HOH A 6 709 32 HOH HOH . M 4 HOH A 7 710 35 HOH HOH . M 4 HOH A 8 711 37 HOH HOH . M 4 HOH A 9 712 39 HOH HOH . M 4 HOH A 10 713 41 HOH HOH . M 4 HOH A 11 714 43 HOH HOH . M 4 HOH A 12 715 51 HOH HOH . M 4 HOH A 13 716 54 HOH HOH . M 4 HOH A 14 717 57 HOH HOH . M 4 HOH A 15 718 58 HOH HOH . M 4 HOH A 16 719 64 HOH HOH . M 4 HOH A 17 720 79 HOH HOH . M 4 HOH A 18 721 87 HOH HOH . M 4 HOH A 19 722 93 HOH HOH . M 4 HOH A 20 723 94 HOH HOH . M 4 HOH A 21 724 97 HOH HOH . M 4 HOH A 22 725 99 HOH HOH . M 4 HOH A 23 726 106 HOH HOH . M 4 HOH A 24 727 108 HOH HOH . M 4 HOH A 25 728 109 HOH HOH . M 4 HOH A 26 729 112 HOH HOH . M 4 HOH A 27 730 114 HOH HOH . M 4 HOH A 28 731 118 HOH HOH . M 4 HOH A 29 732 119 HOH HOH . M 4 HOH A 30 733 122 HOH HOH . M 4 HOH A 31 734 129 HOH HOH . M 4 HOH A 32 735 133 HOH HOH . M 4 HOH A 33 736 135 HOH HOH . M 4 HOH A 34 737 138 HOH HOH . M 4 HOH A 35 738 139 HOH HOH . M 4 HOH A 36 739 142 HOH HOH . M 4 HOH A 37 740 153 HOH HOH . M 4 HOH A 38 741 161 HOH HOH . M 4 HOH A 39 742 164 HOH HOH . M 4 HOH A 40 743 165 HOH HOH . N 4 HOH B 1 705 1 HOH HOH . N 4 HOH B 2 706 2 HOH HOH . N 4 HOH B 3 707 10 HOH HOH . N 4 HOH B 4 708 12 HOH HOH . N 4 HOH B 5 709 16 HOH HOH . N 4 HOH B 6 710 21 HOH HOH . N 4 HOH B 7 711 24 HOH HOH . N 4 HOH B 8 712 27 HOH HOH . N 4 HOH B 9 713 29 HOH HOH . N 4 HOH B 10 714 31 HOH HOH . N 4 HOH B 11 715 38 HOH HOH . N 4 HOH B 12 716 45 HOH HOH . N 4 HOH B 13 717 47 HOH HOH . N 4 HOH B 14 718 55 HOH HOH . N 4 HOH B 15 719 59 HOH HOH . N 4 HOH B 16 720 60 HOH HOH . N 4 HOH B 17 721 63 HOH HOH . N 4 HOH B 18 722 67 HOH HOH . N 4 HOH B 19 723 69 HOH HOH . N 4 HOH B 20 724 73 HOH HOH . N 4 HOH B 21 725 74 HOH HOH . N 4 HOH B 22 726 76 HOH HOH . N 4 HOH B 23 727 77 HOH HOH . N 4 HOH B 24 728 81 HOH HOH . N 4 HOH B 25 729 86 HOH HOH . N 4 HOH B 26 730 91 HOH HOH . N 4 HOH B 27 731 100 HOH HOH . N 4 HOH B 28 732 101 HOH HOH . N 4 HOH B 29 733 103 HOH HOH . N 4 HOH B 30 734 104 HOH HOH . N 4 HOH B 31 735 105 HOH HOH . N 4 HOH B 32 736 107 HOH HOH . N 4 HOH B 33 737 120 HOH HOH . N 4 HOH B 34 738 121 HOH HOH . N 4 HOH B 35 739 125 HOH HOH . N 4 HOH B 36 740 134 HOH HOH . N 4 HOH B 37 741 140 HOH HOH . N 4 HOH B 38 742 147 HOH HOH . N 4 HOH B 39 743 156 HOH HOH . N 4 HOH B 40 744 157 HOH HOH . O 4 HOH C 1 702 4 HOH HOH . O 4 HOH C 2 703 5 HOH HOH . O 4 HOH C 3 704 6 HOH HOH . O 4 HOH C 4 705 7 HOH HOH . O 4 HOH C 5 706 23 HOH HOH . O 4 HOH C 6 707 30 HOH HOH . O 4 HOH C 7 708 33 HOH HOH . O 4 HOH C 8 709 34 HOH HOH . O 4 HOH C 9 710 36 HOH HOH . O 4 HOH C 10 711 40 HOH HOH . O 4 HOH C 11 712 42 HOH HOH . O 4 HOH C 12 713 48 HOH HOH . O 4 HOH C 13 714 50 HOH HOH . O 4 HOH C 14 715 52 HOH HOH . O 4 HOH C 15 716 62 HOH HOH . O 4 HOH C 16 717 66 HOH HOH . O 4 HOH C 17 718 70 HOH HOH . O 4 HOH C 18 719 75 HOH HOH . O 4 HOH C 19 720 78 HOH HOH . O 4 HOH C 20 721 80 HOH HOH . O 4 HOH C 21 722 83 HOH HOH . O 4 HOH C 22 723 85 HOH HOH . O 4 HOH C 23 724 88 HOH HOH . O 4 HOH C 24 725 90 HOH HOH . O 4 HOH C 25 726 92 HOH HOH . O 4 HOH C 26 727 96 HOH HOH . O 4 HOH C 27 728 111 HOH HOH . O 4 HOH C 28 729 116 HOH HOH . O 4 HOH C 29 730 117 HOH HOH . O 4 HOH C 30 731 124 HOH HOH . O 4 HOH C 31 732 128 HOH HOH . O 4 HOH C 32 733 130 HOH HOH . O 4 HOH C 33 734 131 HOH HOH . O 4 HOH C 34 735 143 HOH HOH . O 4 HOH C 35 736 144 HOH HOH . O 4 HOH C 36 737 148 HOH HOH . O 4 HOH C 37 738 150 HOH HOH . O 4 HOH C 38 739 152 HOH HOH . O 4 HOH C 39 740 155 HOH HOH . O 4 HOH C 40 741 158 HOH HOH . O 4 HOH C 41 742 159 HOH HOH . O 4 HOH C 42 743 162 HOH HOH . P 4 HOH D 1 703 3 HOH HOH . P 4 HOH D 2 704 8 HOH HOH . P 4 HOH D 3 705 9 HOH HOH . P 4 HOH D 4 706 11 HOH HOH . P 4 HOH D 5 707 15 HOH HOH . P 4 HOH D 6 708 19 HOH HOH . P 4 HOH D 7 709 20 HOH HOH . P 4 HOH D 8 710 22 HOH HOH . P 4 HOH D 9 711 25 HOH HOH . P 4 HOH D 10 712 26 HOH HOH . P 4 HOH D 11 713 44 HOH HOH . P 4 HOH D 12 714 46 HOH HOH . P 4 HOH D 13 715 49 HOH HOH . P 4 HOH D 14 716 53 HOH HOH . P 4 HOH D 15 717 56 HOH HOH . P 4 HOH D 16 718 61 HOH HOH . P 4 HOH D 17 719 65 HOH HOH . P 4 HOH D 18 720 68 HOH HOH . P 4 HOH D 19 721 71 HOH HOH . P 4 HOH D 20 722 72 HOH HOH . P 4 HOH D 21 723 82 HOH HOH . P 4 HOH D 22 724 84 HOH HOH . P 4 HOH D 23 725 89 HOH HOH . P 4 HOH D 24 726 95 HOH HOH . P 4 HOH D 25 727 98 HOH HOH . P 4 HOH D 26 728 102 HOH HOH . P 4 HOH D 27 729 110 HOH HOH . P 4 HOH D 28 730 113 HOH HOH . P 4 HOH D 29 731 115 HOH HOH . P 4 HOH D 30 732 123 HOH HOH . P 4 HOH D 31 733 126 HOH HOH . P 4 HOH D 32 734 127 HOH HOH . P 4 HOH D 33 735 132 HOH HOH . P 4 HOH D 34 736 136 HOH HOH . P 4 HOH D 35 737 137 HOH HOH . P 4 HOH D 36 738 141 HOH HOH . P 4 HOH D 37 739 145 HOH HOH . P 4 HOH D 38 740 146 HOH HOH . P 4 HOH D 39 741 149 HOH HOH . P 4 HOH D 40 742 151 HOH HOH . P 4 HOH D 41 743 154 HOH HOH . P 4 HOH D 42 744 160 HOH HOH . P 4 HOH D 43 745 163 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 340 . . . E 2 -0.584 17.1 4.266 1 56.64 ? C1 340 703 A 1 HETATM 2 C C2 340 . . . E 2 -0.683 15.627 3.947 1 56.63 ? C2 340 703 A 1 HETATM 3 C C3 340 . . . E 2 -1.154 14.723 4.898 1 56.68 ? C3 340 703 A 1 HETATM 4 C C4 340 . . . E 2 -1.556 15.185 6.207 1 56.72 ? C4 340 703 A 1 HETATM 5 C C5 340 . . . E 2 -1.481 16.539 6.554 1 56.71 ? C5 340 703 A 1 HETATM 6 C C6 340 . . . E 2 -0.967 17.567 5.531 1 56.69 ? C6 340 703 A 1 HETATM 7 N N7 340 . . . E 2 -1.333 13.322 4.842 1 56.66 ? N7 340 703 A 1 HETATM 8 C C8 340 . . . E 2 -1.843 12.887 6.085 1 56.7 ? C8 340 703 A 1 HETATM 9 C C9 340 . . . E 2 -1.953 13.993 6.823 1 56.77 ? C9 340 703 A 1 HETATM 10 O O10 340 . . . E 2 -1.808 16.944 7.65 1 56.72 ? O10 340 703 A 1 HETATM 11 O O11 340 . . . E 2 -0.333 15.266 2.827 1 56.55 ? O11 340 703 A 1 HETATM 12 C C12 340 . . . E 2 -1.065 12.373 3.727 1 56.65 ? C12 340 703 A 1 HETATM 13 C C19 340 . . . E 2 -2.473 13.94 8.229 1 56.91 ? C19 340 703 A 1 HETATM 14 O O20 340 . . . E 2 -3.473 14.825 8.742 1 57.14 ? O20 340 703 A 1 HETATM 15 C C24 340 . . . E 2 -4.584 15.758 8.755 1 57.38 ? C24 340 703 A 1 HETATM 16 C C25 340 . . . E 2 -5.829 15.006 8.888 1 57.48 ? C25 340 703 A 1 HETATM 17 C C26 340 . . . E 2 -7.096 15.698 8.932 1 57.56 ? C26 340 703 A 1 HETATM 18 C C27 340 . . . E 2 -7.146 17.144 8.843 1 57.57 ? C27 340 703 A 1 HETATM 19 C C28 340 . . . E 2 -5.925 17.899 8.709 1 57.53 ? C28 340 703 A 1 HETATM 20 C C29 340 . . . E 2 -4.661 17.214 8.667 1 57.45 ? C29 340 703 A 1 HETATM 21 C C37 340 . . . E 2 -2.164 11.419 6.398 1 56.64 ? C37 340 703 A 1 HETATM 22 O O44 340 . . . E 2 -0.918 18.925 5.957 1 56.65 ? O44 340 703 A 1 HETATM 23 C C45 340 . . . E 2 -0.451 19.957 5.078 1 56.55 ? C45 340 703 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 34 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 23 #