data_1KE0 # _model_server_result.job_id mUwjeDxV2CQdCbjOtqHdYA _model_server_result.datetime_utc '2024-11-23 05:04:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ke0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":364}' # _entry.id 1KE0 # _exptl.entry_id 1KE0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 191.976 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(CARBOXYVIN-2-YL)PHENYLBORONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.32 _cell.angle_gamma 90 _cell.entry_id 1KE0 _cell.length_a 118.62 _cell.length_b 77.43 _cell.length_c 97.37 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KE0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1 B,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OG SER 61 A SER 64 1_555 D B CVB . A CVB 364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.708 ? covale ? covale2 B OG SER 61 B SER 64 1_555 E B CVB . B CVB 364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.616 ? # _chem_comp.formula 'C9 H9 B O4' _chem_comp.formula_weight 191.976 _chem_comp.id CVB _chem_comp.mon_nstd_flag . _chem_comp.name '4-(CARBOXYVIN-2-YL)PHENYLBORONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag B OB1 CVB sing 70 n n B OB2 CVB sing 71 n n B CP1 CVB sing 72 n n OB1 HO11 CVB sing 73 n n OB2 HO21 CVB sing 74 n n CP1 CP2 CVB doub 75 n y CP1 CP6 CVB sing 76 n y CP2 CP3 CVB sing 77 n y CP2 HC21 CVB sing 78 n n CP3 CP4 CVB doub 79 n y CP3 HC31 CVB sing 80 n n CP4 CX1 CVB sing 81 n n CP4 CP5 CVB sing 82 n y CX1 CX2 CVB doub 83 e n CX1 HX11 CVB sing 84 n n CX2 CX3 CVB sing 85 n n CX2 HX21 CVB sing 86 n n CX3 OX1 CVB sing 87 n n CX3 OX2 CVB doub 88 n n OX1 H11 CVB sing 89 n n CP5 CP6 CVB doub 90 n y CP5 HC51 CVB sing 91 n n CP6 HC61 CVB sing 92 n n # _atom_sites.entry_id 1KE0 _atom_sites.fract_transf_matrix[1][1] 0.00843 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003989 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012915 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011362 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 1 1 PO4 PO4 . D 3 CVB A 1 364 364 CVB CVB . E 3 CVB B 1 364 364 CVB CVB . F 4 HOH A 1 402 402 HOH WAT . F 4 HOH A 2 403 403 HOH WAT . F 4 HOH A 3 404 404 HOH WAT . F 4 HOH A 4 405 405 HOH WAT . F 4 HOH A 5 410 410 HOH WAT . F 4 HOH A 6 411 411 HOH WAT . F 4 HOH A 7 412 412 HOH WAT . F 4 HOH A 8 413 413 HOH WAT . F 4 HOH A 9 415 415 HOH WAT . F 4 HOH A 10 417 417 HOH WAT . F 4 HOH A 11 418 418 HOH WAT . F 4 HOH A 12 419 419 HOH WAT . F 4 HOH A 13 421 421 HOH WAT . F 4 HOH A 14 422 422 HOH WAT . F 4 HOH A 15 423 423 HOH WAT . F 4 HOH A 16 424 424 HOH WAT . F 4 HOH A 17 426 426 HOH WAT . F 4 HOH A 18 429 429 HOH WAT . F 4 HOH A 19 430 430 HOH WAT . F 4 HOH A 20 434 434 HOH WAT . F 4 HOH A 21 435 435 HOH WAT . F 4 HOH A 22 437 437 HOH WAT . F 4 HOH A 23 439 439 HOH WAT . F 4 HOH A 24 440 440 HOH WAT . F 4 HOH A 25 446 446 HOH WAT . F 4 HOH A 26 449 449 HOH WAT . F 4 HOH A 27 450 450 HOH WAT . F 4 HOH A 28 454 454 HOH WAT . F 4 HOH A 29 456 456 HOH WAT . F 4 HOH A 30 459 459 HOH WAT . F 4 HOH A 31 460 460 HOH WAT . F 4 HOH A 32 462 462 HOH WAT . F 4 HOH A 33 463 463 HOH WAT . F 4 HOH A 34 464 464 HOH WAT . F 4 HOH A 35 467 467 HOH WAT . F 4 HOH A 36 472 472 HOH WAT . F 4 HOH A 37 473 473 HOH WAT . F 4 HOH A 38 474 474 HOH WAT . F 4 HOH A 39 475 475 HOH WAT . F 4 HOH A 40 476 476 HOH WAT . F 4 HOH A 41 477 477 HOH WAT . F 4 HOH A 42 478 478 HOH WAT . F 4 HOH A 43 479 479 HOH WAT . F 4 HOH A 44 480 480 HOH WAT . F 4 HOH A 45 481 481 HOH WAT . F 4 HOH A 46 482 482 HOH WAT . F 4 HOH A 47 484 484 HOH WAT . F 4 HOH A 48 485 485 HOH WAT . F 4 HOH A 49 487 487 HOH WAT . F 4 HOH A 50 492 492 HOH WAT . F 4 HOH A 51 494 494 HOH WAT . F 4 HOH A 52 499 499 HOH WAT . F 4 HOH A 53 500 500 HOH WAT . F 4 HOH A 54 501 501 HOH WAT . F 4 HOH A 55 502 502 HOH WAT . F 4 HOH A 56 503 503 HOH WAT . F 4 HOH A 57 504 504 HOH WAT . F 4 HOH A 58 505 505 HOH WAT . F 4 HOH A 59 506 506 HOH WAT . F 4 HOH A 60 511 511 HOH WAT . F 4 HOH A 61 512 512 HOH WAT . F 4 HOH A 62 520 520 HOH WAT . F 4 HOH A 63 521 521 HOH WAT . F 4 HOH A 64 523 523 HOH WAT . F 4 HOH A 65 524 524 HOH WAT . F 4 HOH A 66 527 527 HOH WAT . F 4 HOH A 67 528 528 HOH WAT . F 4 HOH A 68 529 529 HOH WAT . F 4 HOH A 69 530 530 HOH WAT . F 4 HOH A 70 534 534 HOH WAT . F 4 HOH A 71 535 535 HOH WAT . F 4 HOH A 72 537 537 HOH WAT . G 4 HOH B 1 400 400 HOH WAT . G 4 HOH B 2 401 401 HOH WAT . G 4 HOH B 3 406 406 HOH WAT . G 4 HOH B 4 407 407 HOH WAT . G 4 HOH B 5 408 408 HOH WAT . G 4 HOH B 6 409 409 HOH WAT . G 4 HOH B 7 414 414 HOH WAT . G 4 HOH B 8 416 416 HOH WAT . G 4 HOH B 9 420 420 HOH WAT . G 4 HOH B 10 425 425 HOH WAT . G 4 HOH B 11 427 427 HOH WAT . G 4 HOH B 12 428 428 HOH WAT . G 4 HOH B 13 431 431 HOH WAT . G 4 HOH B 14 432 432 HOH WAT . G 4 HOH B 15 433 433 HOH WAT . G 4 HOH B 16 436 436 HOH WAT . G 4 HOH B 17 438 438 HOH WAT . G 4 HOH B 18 441 441 HOH WAT . G 4 HOH B 19 442 442 HOH WAT . G 4 HOH B 20 443 443 HOH WAT . G 4 HOH B 21 444 444 HOH WAT . G 4 HOH B 22 445 445 HOH WAT . G 4 HOH B 23 447 447 HOH WAT . G 4 HOH B 24 448 448 HOH WAT . G 4 HOH B 25 451 451 HOH WAT . G 4 HOH B 26 452 452 HOH WAT . G 4 HOH B 27 453 453 HOH WAT . G 4 HOH B 28 455 455 HOH WAT . G 4 HOH B 29 457 457 HOH WAT . G 4 HOH B 30 458 458 HOH WAT . G 4 HOH B 31 461 461 HOH WAT . G 4 HOH B 32 465 465 HOH WAT . G 4 HOH B 33 466 466 HOH WAT . G 4 HOH B 34 468 468 HOH WAT . G 4 HOH B 35 469 469 HOH WAT . G 4 HOH B 36 470 470 HOH WAT . G 4 HOH B 37 471 471 HOH WAT . G 4 HOH B 38 483 483 HOH WAT . G 4 HOH B 39 486 486 HOH WAT . G 4 HOH B 40 488 488 HOH WAT . G 4 HOH B 41 489 489 HOH WAT . G 4 HOH B 42 490 490 HOH WAT . G 4 HOH B 43 491 491 HOH WAT . G 4 HOH B 44 493 493 HOH WAT . G 4 HOH B 45 495 495 HOH WAT . G 4 HOH B 46 496 496 HOH WAT . G 4 HOH B 47 497 497 HOH WAT . G 4 HOH B 48 498 498 HOH WAT . G 4 HOH B 49 507 507 HOH WAT . G 4 HOH B 50 508 508 HOH WAT . G 4 HOH B 51 509 509 HOH WAT . G 4 HOH B 52 510 510 HOH WAT . G 4 HOH B 53 513 513 HOH WAT . G 4 HOH B 54 514 514 HOH WAT . G 4 HOH B 55 515 515 HOH WAT . G 4 HOH B 56 516 516 HOH WAT . G 4 HOH B 57 517 517 HOH WAT . G 4 HOH B 58 518 518 HOH WAT . G 4 HOH B 59 519 519 HOH WAT . G 4 HOH B 60 522 522 HOH WAT . G 4 HOH B 61 525 525 HOH WAT . G 4 HOH B 62 526 526 HOH WAT . G 4 HOH B 63 531 531 HOH WAT . G 4 HOH B 64 532 532 HOH WAT . G 4 HOH B 65 533 533 HOH WAT . G 4 HOH B 66 536 536 HOH WAT . G 4 HOH B 67 538 538 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 B B CVB . . . E 3 78.141 4.711 28.723 1 30.28 ? B CVB 364 B 1 HETATM 2 O OB1 CVB . . . E 3 79.003 3.522 28.688 1 30.14 ? OB1 CVB 364 B 1 HETATM 3 O OB2 CVB . . . E 3 78.098 5.322 27.38 1 30 ? OB2 CVB 364 B 1 HETATM 4 C CP1 CVB . . . E 3 78.69 5.718 29.789 1 34.44 ? CP1 CVB 364 B 1 HETATM 5 C CP2 CVB . . . E 3 79.015 5.228 31.04 1 36.18 ? CP2 CVB 364 B 1 HETATM 6 C CP3 CVB . . . E 3 79.515 6.043 32.034 1 37.78 ? CP3 CVB 364 B 1 HETATM 7 C CP4 CVB . . . E 3 79.696 7.435 31.76 1 40.44 ? CP4 CVB 364 B 1 HETATM 8 C CX1 CVB . . . E 3 80.194 8.355 32.801 1 44.12 ? CX1 CVB 364 B 1 HETATM 9 C CX2 CVB . . . E 3 80.492 7.904 34.051 1 49.08 ? CX2 CVB 364 B 1 HETATM 10 C CX3 CVB . . . E 3 80.954 8.802 35.097 1 51.06 ? CX3 CVB 364 B 1 HETATM 11 O OX1 CVB . . . E 3 82.179 8.651 35.608 1 52.64 ? OX1 CVB 364 B 1 HETATM 12 O OX2 CVB . . . E 3 80.213 9.698 35.52 1 52.24 ? OX2 CVB 364 B 1 HETATM 13 C CP5 CVB . . . E 3 79.354 7.922 30.458 1 38.77 ? CP5 CVB 364 B 1 HETATM 14 C CP6 CVB . . . E 3 78.858 7.065 29.507 1 35.71 ? CP6 CVB 364 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 14 #