data_1KEB
#
_model_server_result.job_id            K8sxUae_L4XrhWe3B5Krqw 
_model_server_result.datetime_utc      '2024-10-12 14:27:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1keb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":109}' 
#
_entry.id    1KEB 
#
_exptl.entry_id    1KEB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              63.546 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'COPPER (II) ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         69.25 
_cell.angle_beta          79.71 
_cell.angle_gamma         85.39 
_cell.entry_id            1KEB 
_cell.length_a            29.32 
_cell.length_b            37.5 
_cell.length_c            50.74 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1KEB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 32 A CYS 32 1_555 A SG CYS 35 A CYS 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf2 B SG CYS 32 B CYS 32 1_555 B SG CYS 35 B CYS 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
metalc ? metalc1 A N SER 1 A SER 1 1_555 C CU CU . A CU 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
metalc ? metalc2 A N ASP 2 A ASP 2 1_555 C CU CU . A CU 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? 
metalc ? metalc3 A OD1 ASP 2 A ASP 2 1_555 C CU CU . A CU 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.918 ? 
metalc ? metalc4 A OD1 ASP 10 A ASP 10 1_555 D CU CU . B CU 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? 
metalc ? metalc5 C CU CU . A CU 109 1_555 E O HOH . A HOH 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.513 ? 
metalc ? metalc6 C CU CU . A CU 109 1_555 B ND1 HIS 6 B HIS 6 1_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? 
metalc ? metalc7 B N SER 1 B SER 1 1_555 D CU CU . B CU 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
metalc ? metalc8 B N ASP 2 B ASP 2 1_555 D CU CU . B CU 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? 
metalc ? metalc9 B OD1 ASP 2 B ASP 2 1_555 D CU CU . B CU 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.975 ? 
metalc ? metalc10 D CU CU . B CU 109 1_555 F O HOH . B HOH 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.649 ? 
#
_chem_comp.formula           'Cu 2' 
_chem_comp.formula_weight    63.546 
_chem_comp.id                CU 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'COPPER (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1KEB 
_atom_sites.fract_transf_matrix[1][1]    0.034106 
_atom_sites.fract_transf_matrix[1][2]    -0.00275 
_atom_sites.fract_transf_matrix[1][3]    -0.005585 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.026753 
_atom_sites.fract_transf_matrix[2][3]    -0.009886 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.021354 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CU A 1 109 109 CU CU . 
D 2 CU B 1 109 109 CU CU . 
E 3 HOH A 1 110 1 HOH TIP . 
E 3 HOH A 2 111 2 HOH TIP . 
E 3 HOH A 3 112 3 HOH TIP . 
E 3 HOH A 4 113 5 HOH TIP . 
E 3 HOH A 5 114 6 HOH TIP . 
E 3 HOH A 6 115 16 HOH TIP . 
E 3 HOH A 7 116 19 HOH TIP . 
E 3 HOH A 8 117 20 HOH TIP . 
E 3 HOH A 9 118 21 HOH TIP . 
E 3 HOH A 10 119 25 HOH TIP . 
E 3 HOH A 11 120 27 HOH TIP . 
E 3 HOH A 12 121 29 HOH TIP . 
E 3 HOH A 13 122 30 HOH TIP . 
E 3 HOH A 14 123 31 HOH TIP . 
E 3 HOH A 15 124 37 HOH TIP . 
E 3 HOH A 16 125 39 HOH TIP . 
E 3 HOH A 17 126 42 HOH TIP . 
E 3 HOH A 18 127 43 HOH TIP . 
E 3 HOH A 19 128 44 HOH TIP . 
E 3 HOH A 20 129 46 HOH TIP . 
E 3 HOH A 21 130 49 HOH TIP . 
E 3 HOH A 22 131 50 HOH TIP . 
E 3 HOH A 23 132 51 HOH TIP . 
E 3 HOH A 24 133 52 HOH TIP . 
E 3 HOH A 25 134 53 HOH TIP . 
E 3 HOH A 26 135 54 HOH TIP . 
E 3 HOH A 27 136 55 HOH TIP . 
E 3 HOH A 28 137 56 HOH TIP . 
E 3 HOH A 29 138 57 HOH TIP . 
E 3 HOH A 30 139 61 HOH TIP . 
E 3 HOH A 31 140 62 HOH TIP . 
E 3 HOH A 32 141 64 HOH TIP . 
E 3 HOH A 33 142 65 HOH TIP . 
E 3 HOH A 34 143 66 HOH TIP . 
E 3 HOH A 35 144 67 HOH TIP . 
E 3 HOH A 36 145 68 HOH TIP . 
E 3 HOH A 37 146 70 HOH TIP . 
E 3 HOH A 38 147 72 HOH TIP . 
E 3 HOH A 39 148 73 HOH TIP . 
E 3 HOH A 40 149 76 HOH TIP . 
E 3 HOH A 41 150 81 HOH TIP . 
E 3 HOH A 42 151 82 HOH TIP . 
E 3 HOH A 43 152 83 HOH TIP . 
E 3 HOH A 44 153 84 HOH TIP . 
E 3 HOH A 45 154 88 HOH TIP . 
E 3 HOH A 46 155 89 HOH TIP . 
E 3 HOH A 47 156 90 HOH TIP . 
E 3 HOH A 48 157 91 HOH TIP . 
E 3 HOH A 49 158 92 HOH TIP . 
E 3 HOH A 50 159 95 HOH TIP . 
E 3 HOH A 51 160 96 HOH TIP . 
E 3 HOH A 52 161 97 HOH TIP . 
E 3 HOH A 53 162 98 HOH TIP . 
E 3 HOH A 54 163 99 HOH TIP . 
E 3 HOH A 55 164 104 HOH TIP . 
E 3 HOH A 56 165 105 HOH TIP . 
E 3 HOH A 57 166 106 HOH TIP . 
E 3 HOH A 58 167 107 HOH TIP . 
E 3 HOH A 59 168 109 HOH TIP . 
E 3 HOH A 60 169 112 HOH TIP . 
E 3 HOH A 61 170 113 HOH TIP . 
E 3 HOH A 62 171 114 HOH TIP . 
E 3 HOH A 63 172 115 HOH TIP . 
E 3 HOH A 64 173 116 HOH TIP . 
E 3 HOH A 65 174 120 HOH TIP . 
E 3 HOH A 66 175 122 HOH TIP . 
E 3 HOH A 67 176 124 HOH TIP . 
E 3 HOH A 68 177 125 HOH TIP . 
E 3 HOH A 69 178 126 HOH TIP . 
E 3 HOH A 70 179 128 HOH TIP . 
E 3 HOH A 71 180 130 HOH TIP . 
E 3 HOH A 72 181 131 HOH TIP . 
E 3 HOH A 73 182 132 HOH TIP . 
F 3 HOH B 1 110 4 HOH TIP . 
F 3 HOH B 2 111 7 HOH TIP . 
F 3 HOH B 3 112 8 HOH TIP . 
F 3 HOH B 4 113 9 HOH TIP . 
F 3 HOH B 5 114 10 HOH TIP . 
F 3 HOH B 6 115 11 HOH TIP . 
F 3 HOH B 7 116 12 HOH TIP . 
F 3 HOH B 8 117 13 HOH TIP . 
F 3 HOH B 9 118 14 HOH TIP . 
F 3 HOH B 10 119 15 HOH TIP . 
F 3 HOH B 11 120 17 HOH TIP . 
F 3 HOH B 12 121 18 HOH TIP . 
F 3 HOH B 13 122 22 HOH TIP . 
F 3 HOH B 14 123 23 HOH TIP . 
F 3 HOH B 15 124 24 HOH TIP . 
F 3 HOH B 16 125 26 HOH TIP . 
F 3 HOH B 17 126 28 HOH TIP . 
F 3 HOH B 18 127 32 HOH TIP . 
F 3 HOH B 19 128 33 HOH TIP . 
F 3 HOH B 20 129 34 HOH TIP . 
F 3 HOH B 21 130 35 HOH TIP . 
F 3 HOH B 22 131 36 HOH TIP . 
F 3 HOH B 23 132 38 HOH TIP . 
F 3 HOH B 24 133 40 HOH TIP . 
F 3 HOH B 25 134 41 HOH TIP . 
F 3 HOH B 26 135 45 HOH TIP . 
F 3 HOH B 27 136 47 HOH TIP . 
F 3 HOH B 28 137 48 HOH TIP . 
F 3 HOH B 29 138 58 HOH TIP . 
F 3 HOH B 30 139 59 HOH TIP . 
F 3 HOH B 31 140 60 HOH TIP . 
F 3 HOH B 32 141 63 HOH TIP . 
F 3 HOH B 33 142 69 HOH TIP . 
F 3 HOH B 34 143 71 HOH TIP . 
F 3 HOH B 35 144 74 HOH TIP . 
F 3 HOH B 36 145 75 HOH TIP . 
F 3 HOH B 37 146 77 HOH TIP . 
F 3 HOH B 38 147 78 HOH TIP . 
F 3 HOH B 39 148 79 HOH TIP . 
F 3 HOH B 40 149 80 HOH TIP . 
F 3 HOH B 41 150 85 HOH TIP . 
F 3 HOH B 42 151 86 HOH TIP . 
F 3 HOH B 43 152 87 HOH TIP . 
F 3 HOH B 44 153 93 HOH TIP . 
F 3 HOH B 45 154 94 HOH TIP . 
F 3 HOH B 46 155 100 HOH TIP . 
F 3 HOH B 47 156 101 HOH TIP . 
F 3 HOH B 48 157 102 HOH TIP . 
F 3 HOH B 49 158 103 HOH TIP . 
F 3 HOH B 50 159 108 HOH TIP . 
F 3 HOH B 51 160 110 HOH TIP . 
F 3 HOH B 52 161 111 HOH TIP . 
F 3 HOH B 53 162 117 HOH TIP . 
F 3 HOH B 54 163 118 HOH TIP . 
F 3 HOH B 55 164 119 HOH TIP . 
F 3 HOH B 56 165 121 HOH TIP . 
F 3 HOH B 57 166 123 HOH TIP . 
F 3 HOH B 58 167 127 HOH TIP . 
F 3 HOH B 59 168 129 HOH TIP . 
F 3 HOH B 60 169 133 HOH TIP . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CU 
_atom_site.label_atom_id         CU 
_atom_site.label_comp_id         CU 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               3.446 
_atom_site.Cartn_y               18.122 
_atom_site.Cartn_z               8.201 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        15.05 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CU 
_atom_site.auth_comp_id          CU 
_atom_site.auth_seq_id           109 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              59 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           310 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           1 
#