data_1KGJ # _model_server_result.job_id uXrrpuQtOZrMddqNpHJbkQ _model_server_result.datetime_utc '2025-03-09 04:21:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1kgj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":328}' # _entry.id 1KGJ # _exptl.entry_id 1KGJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 426.056 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "6,4'-DIHYDROXY-3-METHYL-3',5'-DIBROMOFLAVONE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1KGJ _cell.length_a 82.545 _cell.length_b 82.545 _cell.length_c 161.741 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KGJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N # _chem_comp.formula 'C16 H10 Br2 O4' _chem_comp.formula_weight 426.056 _chem_comp.id FL8 _chem_comp.mon_nstd_flag . _chem_comp.name "6,4'-DIHYDROXY-3-METHYL-3',5'-DIBROMOFLAVONE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag BR3 C3' FL8 sing 83 n n BR5 C5' FL8 sing 84 n n O1 C2 FL8 sing 85 n y O1 C8A FL8 sing 86 n y C2 C3 FL8 doub 87 n y C2 C1' FL8 sing 88 n y C3 C4 FL8 sing 89 n y C3 C3B FL8 sing 90 n n C4 C4A FL8 sing 91 n y C4 O4 FL8 doub 92 n n C4A C5 FL8 doub 93 n y C4A C8A FL8 sing 94 n y C5 C6 FL8 sing 95 n y C5 H51 FL8 sing 96 n n C6 C7 FL8 doub 97 n y C6 O6 FL8 sing 98 n n C7 C8 FL8 sing 99 n y C7 H71 FL8 sing 100 n n C8 C8A FL8 doub 101 n y C8 H81 FL8 sing 102 n n C1' C2' FL8 doub 103 n y C1' C6' FL8 sing 104 n y C2' C3' FL8 sing 105 n y C2' "H2'1" FL8 sing 106 n n C3' C4' FL8 doub 107 n y C4' C5' FL8 sing 108 n y C4' O4' FL8 sing 109 n n C5' C6' FL8 doub 110 n y C6' "H6'1" FL8 sing 111 n n O4' "H4'O" FL8 sing 112 n n C3B "H3'1" FL8 sing 113 n n C3B "H3'2" FL8 sing 114 n n C3B "H3'3" FL8 sing 115 n n O6 HO61 FL8 sing 116 n n # _atom_sites.entry_id 1KGJ _atom_sites.fract_transf_matrix[1][1] 0.012115 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012115 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006183 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FL8 B 1 328 328 FL8 FL8 . F 2 FL8 C 1 128 128 FL8 FL8 . G 3 HOH A 1 728 728 HOH TIP . G 3 HOH A 2 730 730 HOH TIP . G 3 HOH A 3 731 731 HOH TIP . G 3 HOH A 4 734 734 HOH TIP . G 3 HOH A 5 742 742 HOH TIP . G 3 HOH A 6 760 760 HOH TIP . G 3 HOH A 7 762 762 HOH TIP . G 3 HOH A 8 768 768 HOH TIP . G 3 HOH A 9 769 769 HOH TIP . G 3 HOH A 10 773 773 HOH TIP . G 3 HOH A 11 782 782 HOH TIP . G 3 HOH A 12 785 785 HOH TIP . G 3 HOH A 13 786 786 HOH TIP . G 3 HOH A 14 787 787 HOH TIP . G 3 HOH A 15 788 788 HOH TIP . G 3 HOH A 16 789 789 HOH TIP . G 3 HOH A 17 790 790 HOH TIP . G 3 HOH A 18 792 792 HOH TIP . G 3 HOH A 19 793 793 HOH TIP . G 3 HOH A 20 794 794 HOH TIP . G 3 HOH A 21 795 795 HOH TIP . G 3 HOH A 22 797 797 HOH TIP . G 3 HOH A 23 801 801 HOH TIP . G 3 HOH A 24 802 802 HOH TIP . G 3 HOH A 25 803 803 HOH TIP . G 3 HOH A 26 807 807 HOH TIP . G 3 HOH A 27 812 812 HOH TIP . G 3 HOH A 28 815 815 HOH TIP . G 3 HOH A 29 817 817 HOH TIP . G 3 HOH A 30 822 822 HOH TIP . G 3 HOH A 31 827 827 HOH TIP . G 3 HOH A 32 828 828 HOH TIP . G 3 HOH A 33 829 829 HOH TIP . G 3 HOH A 34 830 830 HOH TIP . G 3 HOH A 35 831 831 HOH TIP . G 3 HOH A 36 832 832 HOH TIP . G 3 HOH A 37 837 837 HOH TIP . G 3 HOH A 38 843 843 HOH TIP . G 3 HOH A 39 857 857 HOH TIP . G 3 HOH A 40 858 858 HOH TIP . G 3 HOH A 41 859 859 HOH TIP . G 3 HOH A 42 876 876 HOH TIP . G 3 HOH A 43 877 877 HOH TIP . G 3 HOH A 44 878 878 HOH TIP . G 3 HOH A 45 890 890 HOH TIP . G 3 HOH A 46 893 893 HOH TIP . G 3 HOH A 47 894 894 HOH TIP . G 3 HOH A 48 895 895 HOH TIP . G 3 HOH A 49 896 896 HOH TIP . G 3 HOH A 50 897 897 HOH TIP . G 3 HOH A 51 903 903 HOH TIP . G 3 HOH A 52 909 909 HOH TIP . H 3 HOH B 1 732 732 HOH TIP . H 3 HOH B 2 733 733 HOH TIP . H 3 HOH B 3 735 735 HOH TIP . H 3 HOH B 4 736 736 HOH TIP . H 3 HOH B 5 737 737 HOH TIP . H 3 HOH B 6 743 743 HOH TIP . H 3 HOH B 7 748 748 HOH TIP . H 3 HOH B 8 749 749 HOH TIP . H 3 HOH B 9 750 750 HOH TIP . H 3 HOH B 10 751 751 HOH TIP . H 3 HOH B 11 765 765 HOH TIP . H 3 HOH B 12 767 767 HOH TIP . H 3 HOH B 13 771 771 HOH TIP . H 3 HOH B 14 772 772 HOH TIP . H 3 HOH B 15 777 777 HOH TIP . H 3 HOH B 16 780 780 HOH TIP . H 3 HOH B 17 791 791 HOH TIP . H 3 HOH B 18 796 796 HOH TIP . H 3 HOH B 19 798 798 HOH TIP . H 3 HOH B 20 805 805 HOH TIP . H 3 HOH B 21 806 806 HOH TIP . H 3 HOH B 22 818 818 HOH TIP . H 3 HOH B 23 819 819 HOH TIP . H 3 HOH B 24 820 820 HOH TIP . H 3 HOH B 25 824 824 HOH TIP . H 3 HOH B 26 825 825 HOH TIP . H 3 HOH B 27 833 833 HOH TIP . H 3 HOH B 28 834 834 HOH TIP . H 3 HOH B 29 836 836 HOH TIP . H 3 HOH B 30 846 846 HOH TIP . H 3 HOH B 31 852 852 HOH TIP . H 3 HOH B 32 860 860 HOH TIP . H 3 HOH B 33 861 861 HOH TIP . H 3 HOH B 34 864 864 HOH TIP . H 3 HOH B 35 875 875 HOH TIP . H 3 HOH B 36 880 880 HOH TIP . H 3 HOH B 37 881 881 HOH TIP . H 3 HOH B 38 888 888 HOH TIP . H 3 HOH B 39 899 899 HOH TIP . H 3 HOH B 40 901 901 HOH TIP . H 3 HOH B 41 904 904 HOH TIP . H 3 HOH B 42 907 907 HOH TIP . H 3 HOH B 43 912 912 HOH TIP . I 3 HOH C 1 729 729 HOH TIP . I 3 HOH C 2 738 738 HOH TIP . I 3 HOH C 3 739 739 HOH TIP . I 3 HOH C 4 740 740 HOH TIP . I 3 HOH C 5 741 741 HOH TIP . I 3 HOH C 6 747 747 HOH TIP . I 3 HOH C 7 755 755 HOH TIP . I 3 HOH C 8 756 756 HOH TIP . I 3 HOH C 9 757 757 HOH TIP . I 3 HOH C 10 759 759 HOH TIP . I 3 HOH C 11 761 761 HOH TIP . I 3 HOH C 12 766 766 HOH TIP . I 3 HOH C 13 770 770 HOH TIP . I 3 HOH C 14 774 774 HOH TIP . I 3 HOH C 15 775 775 HOH TIP . I 3 HOH C 16 776 776 HOH TIP . I 3 HOH C 17 778 778 HOH TIP . I 3 HOH C 18 784 784 HOH TIP . I 3 HOH C 19 800 800 HOH TIP . I 3 HOH C 20 808 808 HOH TIP . I 3 HOH C 21 809 809 HOH TIP . I 3 HOH C 22 810 810 HOH TIP . I 3 HOH C 23 811 811 HOH TIP . I 3 HOH C 24 813 813 HOH TIP . I 3 HOH C 25 821 821 HOH TIP . I 3 HOH C 26 823 823 HOH TIP . I 3 HOH C 27 826 826 HOH TIP . I 3 HOH C 28 835 835 HOH TIP . I 3 HOH C 29 838 838 HOH TIP . I 3 HOH C 30 847 847 HOH TIP . I 3 HOH C 31 848 848 HOH TIP . I 3 HOH C 32 849 849 HOH TIP . I 3 HOH C 33 850 850 HOH TIP . I 3 HOH C 34 851 851 HOH TIP . I 3 HOH C 35 853 853 HOH TIP . I 3 HOH C 36 854 854 HOH TIP . I 3 HOH C 37 863 863 HOH TIP . I 3 HOH C 38 866 866 HOH TIP . I 3 HOH C 39 869 869 HOH TIP . I 3 HOH C 40 870 870 HOH TIP . I 3 HOH C 41 871 871 HOH TIP . I 3 HOH C 42 872 872 HOH TIP . I 3 HOH C 43 873 873 HOH TIP . I 3 HOH C 44 882 882 HOH TIP . I 3 HOH C 45 884 884 HOH TIP . I 3 HOH C 46 885 885 HOH TIP . I 3 HOH C 47 886 886 HOH TIP . I 3 HOH C 48 891 891 HOH TIP . I 3 HOH C 49 892 892 HOH TIP . I 3 HOH C 50 900 900 HOH TIP . I 3 HOH C 51 902 902 HOH TIP . I 3 HOH C 52 905 905 HOH TIP . I 3 HOH C 53 906 906 HOH TIP . I 3 HOH C 54 908 908 HOH TIP . I 3 HOH C 55 913 913 HOH TIP . J 3 HOH D 1 744 744 HOH TIP . J 3 HOH D 2 745 745 HOH TIP . J 3 HOH D 3 746 746 HOH TIP . J 3 HOH D 4 752 752 HOH TIP . J 3 HOH D 5 753 753 HOH TIP . J 3 HOH D 6 754 754 HOH TIP . J 3 HOH D 7 758 758 HOH TIP . J 3 HOH D 8 763 763 HOH TIP . J 3 HOH D 9 764 764 HOH TIP . J 3 HOH D 10 779 779 HOH TIP . J 3 HOH D 11 781 781 HOH TIP . J 3 HOH D 12 783 783 HOH TIP . J 3 HOH D 13 799 799 HOH TIP . J 3 HOH D 14 804 804 HOH TIP . J 3 HOH D 15 814 814 HOH TIP . J 3 HOH D 16 816 816 HOH TIP . J 3 HOH D 17 839 839 HOH TIP . J 3 HOH D 18 840 840 HOH TIP . J 3 HOH D 19 841 841 HOH TIP . J 3 HOH D 20 842 842 HOH TIP . J 3 HOH D 21 844 844 HOH TIP . J 3 HOH D 22 845 845 HOH TIP . J 3 HOH D 23 855 855 HOH TIP . J 3 HOH D 24 856 856 HOH TIP . J 3 HOH D 25 862 862 HOH TIP . J 3 HOH D 26 865 865 HOH TIP . J 3 HOH D 27 867 867 HOH TIP . J 3 HOH D 28 868 868 HOH TIP . J 3 HOH D 29 874 874 HOH TIP . J 3 HOH D 30 879 879 HOH TIP . J 3 HOH D 31 883 883 HOH TIP . J 3 HOH D 32 887 887 HOH TIP . J 3 HOH D 33 889 889 HOH TIP . J 3 HOH D 34 898 898 HOH TIP . J 3 HOH D 35 910 910 HOH TIP . J 3 HOH D 36 911 911 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 BR BR3 FL8 . . . E 2 42.024 86.321 42.234 0.4 15.16 ? BR3 FL8 328 B 1 HETATM 2 BR BR5 FL8 . . . E 2 37.381 89.344 42.28 0.4 21.1 ? BR5 FL8 328 B 1 HETATM 3 O O1 FL8 . . . E 2 43.283 91.584 41.445 0.4 9.47 ? O1 FL8 328 B 1 HETATM 4 C C2 FL8 . . . E 2 42.267 91.731 42.384 0.4 9.21 ? C2 FL8 328 B 1 HETATM 5 C C3 FL8 . . . E 2 42.178 92.858 43.138 0.4 8.36 ? C3 FL8 328 B 1 HETATM 6 C C4 FL8 . . . E 2 43.146 93.95 43.012 0.4 8.7 ? C4 FL8 328 B 1 HETATM 7 C C4A FL8 . . . E 2 44.209 93.767 42.015 0.4 9.72 ? C4A FL8 328 B 1 HETATM 8 C C5 FL8 . . . E 2 45.2 94.748 41.792 0.4 10.05 ? C5 FL8 328 B 1 HETATM 9 C C6 FL8 . . . E 2 46.193 94.522 40.828 0.4 9.71 ? C6 FL8 328 B 1 HETATM 10 C C7 FL8 . . . E 2 46.182 93.328 40.101 0.4 9.98 ? C7 FL8 328 B 1 HETATM 11 C C8 FL8 . . . E 2 45.205 92.362 40.319 0.4 9.41 ? C8 FL8 328 B 1 HETATM 12 C C8A FL8 . . . E 2 44.229 92.589 41.273 0.4 9.63 ? C8A FL8 328 B 1 HETATM 13 C C1' FL8 . . . E 2 41.402 90.455 42.338 0.4 9.81 ? C1' FL8 328 B 1 HETATM 14 C C2' FL8 . . . E 2 42.014 89.187 42.31 0.4 10.26 ? C2' FL8 328 B 1 HETATM 15 C C3' FL8 . . . E 2 41.232 88.03 42.267 0.4 10.46 ? C3' FL8 328 B 1 HETATM 16 C C4' FL8 . . . E 2 39.848 88.049 42.251 0.4 11.25 ? C4' FL8 328 B 1 HETATM 17 C C5' FL8 . . . E 2 39.265 89.311 42.284 0.4 11.9 ? C5' FL8 328 B 1 HETATM 18 C C6' FL8 . . . E 2 40.002 90.502 42.326 0.4 11.12 ? C6' FL8 328 B 1 HETATM 19 O O4' FL8 . . . E 2 39.106 86.888 42.208 0.4 6.28 ? O4' FL8 328 B 1 HETATM 20 C C3B FL8 . . . E 2 41.1 93.111 44.134 0.4 7.76 ? C3B FL8 328 B 1 HETATM 21 O O4 FL8 . . . E 2 43.097 94.986 43.694 0.4 8.94 ? O4 FL8 328 B 1 HETATM 22 O O6 FL8 . . . E 2 47.169 95.466 40.6 0.4 10.66 ? O6 FL8 328 B 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 22 #