data_1KGL # _model_server_result.job_id qU7IWAKg2yUm3c7DGzJ41g _model_server_result.datetime_utc '2025-03-06 09:44:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1kgl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":175}' # _entry.id 1KGL # _exptl.entry_id 1KGL _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 286.452 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description RETINOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1KGL _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KGL _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H30 O' _chem_comp.formula_weight 286.452 _chem_comp.id RTL _chem_comp.mon_nstd_flag . _chem_comp.name RETINOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 RTL sing 275 n n C1 C6 RTL sing 276 n n C1 C16 RTL sing 277 n n C1 C17 RTL sing 278 n n C2 C3 RTL sing 279 n n C2 H21 RTL sing 280 n n C2 H22 RTL sing 281 n n C3 C4 RTL sing 282 n n C3 H31 RTL sing 283 n n C3 H32 RTL sing 284 n n C4 C5 RTL sing 285 n n C4 H41 RTL sing 286 n n C4 H42 RTL sing 287 n n C5 C6 RTL doub 288 n n C5 C18 RTL sing 289 n n C6 C7 RTL sing 290 n n C7 C8 RTL doub 291 e n C7 H7 RTL sing 292 n n C8 C9 RTL sing 293 n n C8 H8 RTL sing 294 n n C9 C10 RTL doub 295 e n C9 C19 RTL sing 296 n n C10 C11 RTL sing 297 n n C10 H10 RTL sing 298 n n C11 C12 RTL doub 299 e n C11 H11 RTL sing 300 n n C12 C13 RTL sing 301 n n C12 H12 RTL sing 302 n n C13 C14 RTL doub 303 e n C13 C20 RTL sing 304 n n C14 C15 RTL sing 305 n n C14 H14 RTL sing 306 n n C15 O1 RTL sing 307 n n C15 H151 RTL sing 308 n n C15 H152 RTL sing 309 n n O1 HO1 RTL sing 310 n n C16 H161 RTL sing 311 n n C16 H162 RTL sing 312 n n C16 H163 RTL sing 313 n n C17 H171 RTL sing 314 n n C17 H172 RTL sing 315 n n C17 H173 RTL sing 316 n n C18 H181 RTL sing 317 n n C18 H182 RTL sing 318 n n C18 H183 RTL sing 319 n n C19 H191 RTL sing 320 n n C19 H192 RTL sing 321 n n C19 H193 RTL sing 322 n n C20 H201 RTL sing 323 n n C20 H202 RTL sing 324 n n C20 H203 RTL sing 325 n n # _atom_sites.entry_id 1KGL _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id RTL _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 175 _pdbx_nonpoly_scheme.auth_seq_num 175 _pdbx_nonpoly_scheme.pdb_mon_id RTL _pdbx_nonpoly_scheme.auth_mon_id RTL _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 RTL . . . B 2 -20.006 8.529 -20.186 1 0 ? C1 RTL 175 A 1 HETATM 2 C C2 RTL . . . B 2 -20.488 9.303 -21.462 1 0 ? C2 RTL 175 A 1 HETATM 3 C C3 RTL . . . B 2 -21.85 9.994 -21.25 1 0 ? C3 RTL 175 A 1 HETATM 4 C C4 RTL . . . B 2 -22.918 8.966 -20.817 1 0 ? C4 RTL 175 A 1 HETATM 5 C C5 RTL . . . B 2 -22.457 7.874 -19.835 1 0 ? C5 RTL 175 A 1 HETATM 6 C C6 RTL . . . B 2 -21.14 7.601 -19.599 1 0 ? C6 RTL 175 A 1 HETATM 7 C C7 RTL . . . B 2 -20.805 6.348 -18.75 1 0 ? C7 RTL 175 A 1 HETATM 8 C C8 RTL . . . B 2 -19.888 6.336 -17.745 1 0 ? C8 RTL 175 A 1 HETATM 9 C C9 RTL . . . B 2 -19.446 5.252 -17.018 1 0 ? C9 RTL 175 A 1 HETATM 10 C C10 RTL . . . B 2 -18.407 5.481 -16.143 1 0 ? C10 RTL 175 A 1 HETATM 11 C C11 RTL . . . B 2 -17.819 4.577 -15.307 1 0 ? C11 RTL 175 A 1 HETATM 12 C C12 RTL . . . B 2 -16.781 4.937 -14.507 1 0 ? C12 RTL 175 A 1 HETATM 13 C C13 RTL . . . B 2 -16.137 4.041 -13.449 1 0 ? C13 RTL 175 A 1 HETATM 14 C C14 RTL . . . B 2 -15.365 4.675 -12.549 1 0 ? C14 RTL 175 A 1 HETATM 15 C C15 RTL . . . B 2 -14.632 4.068 -11.385 1 0 ? C15 RTL 175 A 1 HETATM 16 O O1 RTL . . . B 2 -13.447 3.441 -11.844 1 0 ? O1 RTL 175 A 1 HETATM 17 C C16 RTL . . . B 2 -19.547 9.576 -19.13 1 0 ? C16 RTL 175 A 1 HETATM 18 C C17 RTL . . . B 2 -18.755 7.74 -20.647 1 0 ? C17 RTL 175 A 1 HETATM 19 C C18 RTL . . . B 2 -23.639 7.105 -19.261 1 0 ? C18 RTL 175 A 1 HETATM 20 C C19 RTL . . . B 2 -20.028 3.823 -17.195 1 0 ? C19 RTL 175 A 1 HETATM 21 C C20 RTL . . . B 2 -16.394 2.541 -13.425 1 0 ? C20 RTL 175 A 1 HETATM 22 H H21 RTL . . . B 2 -20.587 8.599 -22.313 1 0 ? H21 RTL 175 A 1 HETATM 23 H H22 RTL . . . B 2 -19.735 10.043 -21.787 1 0 ? H22 RTL 175 A 1 HETATM 24 H H31 RTL . . . B 2 -22.173 10.512 -22.17 1 0 ? H31 RTL 175 A 1 HETATM 25 H H32 RTL . . . B 2 -21.751 10.784 -20.482 1 0 ? H32 RTL 175 A 1 HETATM 26 H H41 RTL . . . B 2 -23.3 8.463 -21.725 1 0 ? H41 RTL 175 A 1 HETATM 27 H H42 RTL . . . B 2 -23.789 9.516 -20.412 1 0 ? H42 RTL 175 A 1 HETATM 28 H H7 RTL . . . B 2 -21.358 5.454 -18.991 1 0 ? H7 RTL 175 A 1 HETATM 29 H H8 RTL . . . B 2 -19.441 7.292 -17.539 1 0 ? H8 RTL 175 A 1 HETATM 30 H H10 RTL . . . B 2 -18.007 6.491 -16.093 1 0 ? H10 RTL 175 A 1 HETATM 31 H H11 RTL . . . B 2 -18.185 3.562 -15.253 1 0 ? H11 RTL 175 A 1 HETATM 32 H H12 RTL . . . B 2 -16.402 5.949 -14.585 1 0 ? H12 RTL 175 A 1 HETATM 33 H H14 RTL . . . B 2 -15.213 5.754 -12.64 1 0 ? H14 RTL 175 A 1 HETATM 34 H H151 RTL . . . B 2 -15.271 3.339 -10.856 1 0 ? H151 RTL 175 A 1 HETATM 35 H H152 RTL . . . B 2 -14.386 4.844 -10.639 1 0 ? H152 RTL 175 A 1 HETATM 36 H HO1 RTL . . . B 2 -13.556 3.348 -12.795 1 0 ? HO1 RTL 175 A 1 HETATM 37 H H161 RTL . . . B 2 -18.955 9.152 -18.305 1 0 ? H161 RTL 175 A 1 HETATM 38 H H162 RTL . . . B 2 -18.911 10.367 -19.568 1 0 ? H162 RTL 175 A 1 HETATM 39 H H163 RTL . . . B 2 -20.407 10.092 -18.663 1 0 ? H163 RTL 175 A 1 HETATM 40 H H171 RTL . . . B 2 -18.009 8.397 -21.128 1 0 ? H171 RTL 175 A 1 HETATM 41 H H172 RTL . . . B 2 -18.238 7.24 -19.808 1 0 ? H172 RTL 175 A 1 HETATM 42 H H173 RTL . . . B 2 -19.012 6.95 -21.378 1 0 ? H173 RTL 175 A 1 HETATM 43 H H181 RTL . . . B 2 -23.575 7.059 -18.159 1 0 ? H181 RTL 175 A 1 HETATM 44 H H182 RTL . . . B 2 -24.622 7.551 -19.496 1 0 ? H182 RTL 175 A 1 HETATM 45 H H183 RTL . . . B 2 -23.665 6.065 -19.635 1 0 ? H183 RTL 175 A 1 HETATM 46 H H191 RTL . . . B 2 -21.002 3.784 -17.709 1 0 ? H191 RTL 175 A 1 HETATM 47 H H192 RTL . . . B 2 -19.326 3.192 -17.765 1 0 ? H192 RTL 175 A 1 HETATM 48 H H193 RTL . . . B 2 -20.194 3.32 -16.226 1 0 ? H193 RTL 175 A 1 HETATM 49 H H201 RTL . . . B 2 -15.682 1.979 -12.794 1 0 ? H201 RTL 175 A 1 HETATM 50 H H202 RTL . . . B 2 -17.408 2.319 -13.047 1 0 ? H202 RTL 175 A 1 HETATM 51 H H203 RTL . . . B 2 -16.314 2.11 -14.437 1 0 ? H203 RTL 175 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 48 _model_server_stats.query_time_ms 5344 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 51 #