data_1KIL # _model_server_result.job_id xHfZUeXukTSdksdxIIDbyw _model_server_result.datetime_utc '2024-11-04 23:08:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1kil # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":301}' # _entry.id 1KIL # _exptl.entry_id 1KIL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1KIL _cell.length_a 40.489 _cell.length_b 60.425 _cell.length_c 159.787 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KIL _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 F N N ? 6 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 42 A ASP 68 1_555 F MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc2 F MG MG . A MG 301 1_555 H O HOH . A HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.983 ? metalc ? metalc3 F MG MG . A MG 301 1_555 H O HOH . A HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc4 F MG MG . A MG 301 1_555 H O HOH . A HOH 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc5 F MG MG . A MG 301 1_555 I O HOH . B HOH 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc6 F MG MG . A MG 301 1_555 I O HOH . B HOH 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? metalc ? metalc7 G MG MG . C MG 302 1_555 J O HOH . C HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? metalc ? metalc8 G MG MG . C MG 302 1_555 J O HOH . C HOH 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? metalc ? metalc9 G MG MG . C MG 302 1_555 J O HOH . C HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc10 G MG MG . C MG 302 1_555 J O HOH . C HOH 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.61 ? metalc ? metalc11 G MG MG . C MG 302 1_555 K O HOH . D HOH 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.908 ? metalc ? metalc12 G MG MG . C MG 302 1_555 K O HOH . D HOH 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.92 ? metalc ? metalc13 G MG MG . C MG 302 1_555 K O HOH . D HOH 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.987 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1KIL _atom_sites.fract_transf_matrix[1][1] 0.024698 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016549 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006258 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 MG A 1 301 301 MG MG . G 6 MG C 1 302 302 MG MG . H 7 HOH A 1 302 1 HOH HOH . H 7 HOH A 2 303 3 HOH HOH . H 7 HOH A 3 304 5 HOH HOH . H 7 HOH A 4 305 13 HOH HOH . H 7 HOH A 5 306 18 HOH HOH . H 7 HOH A 6 307 20 HOH HOH . H 7 HOH A 7 308 21 HOH HOH . H 7 HOH A 8 309 28 HOH HOH . H 7 HOH A 9 310 53 HOH HOH . H 7 HOH A 10 311 54 HOH HOH . H 7 HOH A 11 312 56 HOH HOH . H 7 HOH A 12 313 57 HOH HOH . H 7 HOH A 13 314 58 HOH HOH . H 7 HOH A 14 315 59 HOH HOH . H 7 HOH A 15 316 60 HOH HOH . H 7 HOH A 16 317 61 HOH HOH . H 7 HOH A 17 318 62 HOH HOH . H 7 HOH A 18 319 63 HOH HOH . H 7 HOH A 19 320 65 HOH HOH . H 7 HOH A 20 321 92 HOH HOH . H 7 HOH A 21 322 93 HOH HOH . H 7 HOH A 22 323 106 HOH HOH . H 7 HOH A 23 324 107 HOH HOH . I 7 HOH B 1 2 2 HOH HOH . I 7 HOH B 2 4 4 HOH HOH . I 7 HOH B 3 19 19 HOH HOH . I 7 HOH B 4 23 23 HOH HOH . I 7 HOH B 5 26 26 HOH HOH . I 7 HOH B 6 29 29 HOH HOH . I 7 HOH B 7 36 36 HOH HOH . I 7 HOH B 8 37 37 HOH HOH . I 7 HOH B 9 38 38 HOH HOH . I 7 HOH B 10 45 45 HOH HOH . I 7 HOH B 11 47 47 HOH HOH . I 7 HOH B 12 48 48 HOH HOH . I 7 HOH B 13 49 49 HOH HOH . I 7 HOH B 14 50 50 HOH HOH . I 7 HOH B 15 51 51 HOH HOH . I 7 HOH B 16 64 64 HOH HOH . I 7 HOH B 17 66 66 HOH HOH . I 7 HOH B 18 67 67 HOH HOH . I 7 HOH B 19 68 68 HOH HOH . I 7 HOH B 20 69 69 HOH HOH . I 7 HOH B 21 70 70 HOH HOH . I 7 HOH B 22 72 72 HOH HOH . I 7 HOH B 23 73 73 HOH HOH . I 7 HOH B 24 94 94 HOH HOH . I 7 HOH B 25 95 95 HOH HOH . I 7 HOH B 26 108 108 HOH HOH . J 7 HOH C 1 303 7 HOH HOH . J 7 HOH C 2 304 9 HOH HOH . J 7 HOH C 3 305 11 HOH HOH . J 7 HOH C 4 306 12 HOH HOH . J 7 HOH C 5 307 14 HOH HOH . J 7 HOH C 6 308 22 HOH HOH . J 7 HOH C 7 309 25 HOH HOH . J 7 HOH C 8 310 27 HOH HOH . J 7 HOH C 9 311 30 HOH HOH . J 7 HOH C 10 312 40 HOH HOH . J 7 HOH C 11 313 43 HOH HOH . J 7 HOH C 12 314 44 HOH HOH . J 7 HOH C 13 315 46 HOH HOH . J 7 HOH C 14 316 74 HOH HOH . J 7 HOH C 15 317 75 HOH HOH . J 7 HOH C 16 318 77 HOH HOH . J 7 HOH C 17 319 78 HOH HOH . J 7 HOH C 18 320 79 HOH HOH . J 7 HOH C 19 321 81 HOH HOH . J 7 HOH C 20 322 82 HOH HOH . J 7 HOH C 21 323 96 HOH HOH . J 7 HOH C 22 324 97 HOH HOH . J 7 HOH C 23 325 98 HOH HOH . J 7 HOH C 24 326 109 HOH HOH . J 7 HOH C 25 327 110 HOH HOH . K 7 HOH D 1 6 6 HOH HOH . K 7 HOH D 2 8 8 HOH HOH . K 7 HOH D 3 10 10 HOH HOH . K 7 HOH D 4 15 15 HOH HOH . K 7 HOH D 5 16 16 HOH HOH . K 7 HOH D 6 17 17 HOH HOH . K 7 HOH D 7 24 24 HOH HOH . K 7 HOH D 8 31 31 HOH HOH . K 7 HOH D 9 33 33 HOH HOH . K 7 HOH D 10 34 34 HOH HOH . K 7 HOH D 11 39 39 HOH HOH . K 7 HOH D 12 52 52 HOH HOH . K 7 HOH D 13 55 55 HOH HOH . K 7 HOH D 14 71 71 HOH HOH . K 7 HOH D 15 76 76 HOH HOH . K 7 HOH D 16 80 80 HOH HOH . K 7 HOH D 17 83 83 HOH HOH . K 7 HOH D 18 84 84 HOH HOH . K 7 HOH D 19 85 85 HOH HOH . K 7 HOH D 20 99 99 HOH HOH . K 7 HOH D 21 100 100 HOH HOH . K 7 HOH D 22 111 111 HOH HOH . K 7 HOH D 23 112 112 HOH HOH . L 7 HOH E 1 73 32 HOH HOH . L 7 HOH E 2 74 35 HOH HOH . L 7 HOH E 3 75 41 HOH HOH . L 7 HOH E 4 76 42 HOH HOH . L 7 HOH E 5 77 86 HOH HOH . L 7 HOH E 6 78 87 HOH HOH . L 7 HOH E 7 79 88 HOH HOH . L 7 HOH E 8 80 89 HOH HOH . L 7 HOH E 9 81 90 HOH HOH . L 7 HOH E 10 82 91 HOH HOH . L 7 HOH E 11 83 101 HOH HOH . L 7 HOH E 12 84 102 HOH HOH . L 7 HOH E 13 85 103 HOH HOH . L 7 HOH E 14 86 104 HOH HOH . L 7 HOH E 15 87 105 HOH HOH . L 7 HOH E 16 88 113 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 6 _atom_site.Cartn_x -7.757 _atom_site.Cartn_y 7.277 _atom_site.Cartn_z 62.012 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 71.56 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #