data_1KJM # _model_server_result.job_id 4o4MMPbepofAOYR9SJZ6iw _model_server_result.datetime_utc '2025-04-23 23:57:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1kjm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":286}' # _entry.id 1KJM # _exptl.entry_id 1KJM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1KJM _cell.length_a 110.049 _cell.length_b 109.566 _cell.length_c 45.3 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KJM _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 101 A CYS 101 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf2 A SG CYS 203 A CYS 203 1_555 A SG CYS 259 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf3 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 1KJM _atom_sites.fract_transf_matrix[1][1] 0.009087 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009127 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022075 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 SO4 A 1 286 201 SO4 SO4 . E 5 HOH A 1 287 1 HOH HOH . E 5 HOH A 2 288 3 HOH HOH . E 5 HOH A 3 289 4 HOH HOH . E 5 HOH A 4 290 5 HOH HOH . E 5 HOH A 5 291 6 HOH HOH . E 5 HOH A 6 292 7 HOH HOH . E 5 HOH A 7 293 8 HOH HOH . E 5 HOH A 8 294 9 HOH HOH . E 5 HOH A 9 295 10 HOH HOH . E 5 HOH A 10 296 11 HOH HOH . E 5 HOH A 11 297 12 HOH HOH . E 5 HOH A 12 298 13 HOH HOH . E 5 HOH A 13 299 14 HOH HOH . E 5 HOH A 14 300 15 HOH HOH . E 5 HOH A 15 301 16 HOH HOH . E 5 HOH A 16 302 17 HOH HOH . E 5 HOH A 17 303 18 HOH HOH . E 5 HOH A 18 304 19 HOH HOH . E 5 HOH A 19 305 20 HOH HOH . E 5 HOH A 20 306 21 HOH HOH . E 5 HOH A 21 307 22 HOH HOH . E 5 HOH A 22 308 23 HOH HOH . E 5 HOH A 23 309 25 HOH HOH . E 5 HOH A 24 310 26 HOH HOH . E 5 HOH A 25 311 27 HOH HOH . E 5 HOH A 26 312 28 HOH HOH . E 5 HOH A 27 313 29 HOH HOH . E 5 HOH A 28 314 30 HOH HOH . E 5 HOH A 29 315 31 HOH HOH . E 5 HOH A 30 316 32 HOH HOH . E 5 HOH A 31 317 33 HOH HOH . E 5 HOH A 32 318 34 HOH HOH . E 5 HOH A 33 319 35 HOH HOH . E 5 HOH A 34 320 36 HOH HOH . E 5 HOH A 35 321 37 HOH HOH . E 5 HOH A 36 322 39 HOH HOH . E 5 HOH A 37 323 40 HOH HOH . E 5 HOH A 38 324 41 HOH HOH . E 5 HOH A 39 325 43 HOH HOH . E 5 HOH A 40 326 44 HOH HOH . E 5 HOH A 41 327 46 HOH HOH . E 5 HOH A 42 328 47 HOH HOH . E 5 HOH A 43 329 49 HOH HOH . E 5 HOH A 44 330 50 HOH HOH . E 5 HOH A 45 331 51 HOH HOH . E 5 HOH A 46 332 52 HOH HOH . E 5 HOH A 47 333 54 HOH HOH . E 5 HOH A 48 334 57 HOH HOH . E 5 HOH A 49 335 59 HOH HOH . E 5 HOH A 50 336 60 HOH HOH . E 5 HOH A 51 337 61 HOH HOH . E 5 HOH A 52 338 62 HOH HOH . E 5 HOH A 53 339 65 HOH HOH . E 5 HOH A 54 340 66 HOH HOH . E 5 HOH A 55 341 67 HOH HOH . E 5 HOH A 56 342 68 HOH HOH . E 5 HOH A 57 343 69 HOH HOH . E 5 HOH A 58 344 71 HOH HOH . E 5 HOH A 59 345 72 HOH HOH . E 5 HOH A 60 346 73 HOH HOH . E 5 HOH A 61 347 74 HOH HOH . E 5 HOH A 62 348 76 HOH HOH . E 5 HOH A 63 349 77 HOH HOH . E 5 HOH A 64 350 78 HOH HOH . E 5 HOH A 65 351 79 HOH HOH . E 5 HOH A 66 352 80 HOH HOH . E 5 HOH A 67 353 82 HOH HOH . E 5 HOH A 68 354 83 HOH HOH . E 5 HOH A 69 355 84 HOH HOH . E 5 HOH A 70 356 85 HOH HOH . E 5 HOH A 71 357 86 HOH HOH . E 5 HOH A 72 358 87 HOH HOH . E 5 HOH A 73 359 88 HOH HOH . E 5 HOH A 74 360 89 HOH HOH . E 5 HOH A 75 361 90 HOH HOH . E 5 HOH A 76 362 92 HOH HOH . E 5 HOH A 77 363 93 HOH HOH . E 5 HOH A 78 364 94 HOH HOH . E 5 HOH A 79 365 95 HOH HOH . E 5 HOH A 80 366 97 HOH HOH . E 5 HOH A 81 367 98 HOH HOH . E 5 HOH A 82 368 100 HOH HOH . E 5 HOH A 83 369 102 HOH HOH . E 5 HOH A 84 370 104 HOH HOH . E 5 HOH A 85 371 106 HOH HOH . E 5 HOH A 86 372 107 HOH HOH . E 5 HOH A 87 373 108 HOH HOH . E 5 HOH A 88 374 111 HOH HOH . E 5 HOH A 89 375 112 HOH HOH . E 5 HOH A 90 376 113 HOH HOH . E 5 HOH A 91 377 114 HOH HOH . E 5 HOH A 92 378 115 HOH HOH . E 5 HOH A 93 379 116 HOH HOH . E 5 HOH A 94 380 118 HOH HOH . E 5 HOH A 95 381 119 HOH HOH . E 5 HOH A 96 382 120 HOH HOH . E 5 HOH A 97 383 121 HOH HOH . E 5 HOH A 98 384 122 HOH HOH . E 5 HOH A 99 385 124 HOH HOH . E 5 HOH A 100 386 126 HOH HOH . E 5 HOH A 101 387 127 HOH HOH . E 5 HOH A 102 388 128 HOH HOH . E 5 HOH A 103 389 130 HOH HOH . E 5 HOH A 104 390 131 HOH HOH . E 5 HOH A 105 391 132 HOH HOH . E 5 HOH A 106 392 133 HOH HOH . E 5 HOH A 107 393 135 HOH HOH . E 5 HOH A 108 394 136 HOH HOH . E 5 HOH A 109 395 137 HOH HOH . E 5 HOH A 110 396 138 HOH HOH . E 5 HOH A 111 397 139 HOH HOH . E 5 HOH A 112 398 140 HOH HOH . E 5 HOH A 113 399 141 HOH HOH . E 5 HOH A 114 400 142 HOH HOH . E 5 HOH A 115 401 143 HOH HOH . E 5 HOH A 116 402 144 HOH HOH . F 5 HOH B 1 100 24 HOH HOH . F 5 HOH B 2 101 38 HOH HOH . F 5 HOH B 3 102 42 HOH HOH . F 5 HOH B 4 103 53 HOH HOH . F 5 HOH B 5 104 55 HOH HOH . F 5 HOH B 6 105 56 HOH HOH . F 5 HOH B 7 106 58 HOH HOH . F 5 HOH B 8 107 63 HOH HOH . F 5 HOH B 9 108 64 HOH HOH . F 5 HOH B 10 109 81 HOH HOH . F 5 HOH B 11 110 96 HOH HOH . F 5 HOH B 12 111 101 HOH HOH . F 5 HOH B 13 112 103 HOH HOH . F 5 HOH B 14 113 109 HOH HOH . F 5 HOH B 15 114 117 HOH HOH . F 5 HOH B 16 115 123 HOH HOH . F 5 HOH B 17 116 125 HOH HOH . F 5 HOH B 18 117 129 HOH HOH . G 5 HOH P 1 10 2 HOH HOH . G 5 HOH P 2 11 45 HOH HOH . G 5 HOH P 3 12 48 HOH HOH . G 5 HOH P 4 13 70 HOH HOH . G 5 HOH P 5 14 75 HOH HOH . G 5 HOH P 6 15 91 HOH HOH . G 5 HOH P 7 16 99 HOH HOH . G 5 HOH P 8 17 105 HOH HOH . G 5 HOH P 9 18 110 HOH HOH . G 5 HOH P 10 19 134 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 4 54.137 11.976 -3.358 1 63.73 ? S SO4 286 A 1 HETATM 2 O O1 SO4 . . . D 4 53.798 13.145 -2.529 1 61.69 ? O1 SO4 286 A 1 HETATM 3 O O2 SO4 . . . D 4 54.408 10.812 -2.504 1 62.68 ? O2 SO4 286 A 1 HETATM 4 O O3 SO4 . . . D 4 53.018 11.679 -4.263 1 61.97 ? O3 SO4 286 A 1 HETATM 5 O O4 SO4 . . . D 4 55.337 12.262 -4.141 1 62.09 ? O4 SO4 286 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 5 #