data_1KK4 # _model_server_result.job_id ky9lz2h0uAycb_g7fDHpFA _model_server_result.datetime_utc '2025-02-05 12:44:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1kk4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":301}' # _entry.id 1KK4 # _exptl.entry_id 1KK4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 809.571 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETYL COENZYME *A' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1KK4 _cell.length_a 186.3 _cell.length_b 186.3 _cell.length_c 186.5 _cell.Z_PDB 96 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KK4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 22 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'F 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,M,N,O 1 1 D,E,F,J,K,L,P,Q,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # _chem_comp.formula 'C23 H38 N7 O17 P3 S' _chem_comp.formula_weight 809.571 _chem_comp.id ACO _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETYL COENZYME *A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A ACO sing 1 n y N1A C6A ACO doub 2 n y C2A N3A ACO doub 3 n y C2A H2A ACO sing 4 n n N3A C4A ACO sing 5 n y C4A C5A ACO doub 6 n y C4A N9A ACO sing 7 n y C5A C6A ACO sing 8 n y C5A N7A ACO sing 9 n y C6A N6A ACO sing 10 n n N6A H61A ACO sing 11 n n N6A H62A ACO sing 12 n n N7A C8A ACO doub 13 n y C8A N9A ACO sing 14 n y C8A H8A ACO sing 15 n n N9A C1B ACO sing 16 n n C1B C2B ACO sing 17 n n C1B O4B ACO sing 18 n n C1B H1B ACO sing 19 n n C2B O2B ACO sing 20 n n C2B C3B ACO sing 21 n n C2B H2B ACO sing 22 n n O2B HO2A ACO sing 23 n n C3B O3B ACO sing 24 n n C3B C4B ACO sing 25 n n C3B H3B ACO sing 26 n n O3B P3B ACO sing 27 n n P3B O7A ACO doub 28 n n P3B O8A ACO sing 29 n n P3B O9A ACO sing 30 n n O8A HOA8 ACO sing 31 n n O9A HOA9 ACO sing 32 n n C4B O4B ACO sing 33 n n C4B C5B ACO sing 34 n n C4B H4B ACO sing 35 n n C5B O5B ACO sing 36 n n C5B H51A ACO sing 37 n n C5B H52A ACO sing 38 n n O5B P1A ACO sing 39 n n P1A O1A ACO doub 40 n n P1A O2A ACO sing 41 n n P1A O3A ACO sing 42 n n O2A HOA2 ACO sing 43 n n O3A P2A ACO sing 44 n n P2A O4A ACO doub 45 n n P2A O5A ACO sing 46 n n P2A O6A ACO sing 47 n n O5A HOA5 ACO sing 48 n n O6A CCP ACO sing 49 n n CBP CCP ACO sing 50 n n CBP CDP ACO sing 51 n n CBP CEP ACO sing 52 n n CBP CAP ACO sing 53 n n CCP H121 ACO sing 54 n n CCP H122 ACO sing 55 n n CDP H131 ACO sing 56 n n CDP H132 ACO sing 57 n n CDP H133 ACO sing 58 n n CEP H141 ACO sing 59 n n CEP H142 ACO sing 60 n n CEP H143 ACO sing 61 n n CAP OAP ACO sing 62 n n CAP C9P ACO sing 63 n n CAP H10 ACO sing 64 n n OAP HO1 ACO sing 65 n n C9P O9P ACO doub 66 n n C9P N8P ACO sing 67 n n N8P C7P ACO sing 68 n n N8P HN8 ACO sing 69 n n C7P C6P ACO sing 70 n n C7P H71 ACO sing 71 n n C7P H72 ACO sing 72 n n C6P C5P ACO sing 73 n n C6P H61 ACO sing 74 n n C6P H62 ACO sing 75 n n C5P O5P ACO doub 76 n n C5P N4P ACO sing 77 n n N4P C3P ACO sing 78 n n N4P HN4 ACO sing 79 n n C3P C2P ACO sing 80 n n C3P H31 ACO sing 81 n n C3P H32 ACO sing 82 n n C2P S1P ACO sing 83 n n C2P H21 ACO sing 84 n n C2P H22 ACO sing 85 n n S1P C ACO sing 86 n n C O ACO doub 87 n n C CH3 ACO sing 88 n n CH3 HH31 ACO sing 89 n n CH3 HH32 ACO sing 90 n n CH3 HH33 ACO sing 91 n n # _atom_sites.entry_id 1KK4 _atom_sites.fract_transf_matrix[1][1] 0.005368 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005368 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005362 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 ACO A 1 301 302 ACO ACA . H 2 ACO B 1 302 302 ACO ACA . I 2 ACO C 1 303 302 ACO ACA . J 2 ACO D 1 304 302 ACO ACA . K 2 ACO E 1 305 302 ACO ACA . L 2 ACO F 1 306 302 ACO ACA . M 3 HOH A 1 3510 3510 HOH TIP . M 3 HOH A 2 3516 3516 HOH TIP . M 3 HOH A 3 3522 3522 HOH TIP . M 3 HOH A 4 3523 3523 HOH TIP . M 3 HOH A 5 3524 3524 HOH TIP . M 3 HOH A 6 3536 3536 HOH TIP . M 3 HOH A 7 3539 3539 HOH TIP . M 3 HOH A 8 3563 3563 HOH TIP . M 3 HOH A 9 3574 3574 HOH TIP . M 3 HOH A 10 3575 3575 HOH TIP . M 3 HOH A 11 3584 3584 HOH TIP . M 3 HOH A 12 3594 3594 HOH TIP . M 3 HOH A 13 3601 3601 HOH TIP . M 3 HOH A 14 3612 3612 HOH TIP . M 3 HOH A 15 3613 3613 HOH TIP . M 3 HOH A 16 3614 3614 HOH TIP . M 3 HOH A 17 3615 3615 HOH TIP . M 3 HOH A 18 3616 3616 HOH TIP . M 3 HOH A 19 3617 3617 HOH TIP . M 3 HOH A 20 3618 3618 HOH TIP . N 3 HOH B 1 3500 3500 HOH TIP . N 3 HOH B 2 3503 3503 HOH TIP . N 3 HOH B 3 3505 3505 HOH TIP . N 3 HOH B 4 3508 3508 HOH TIP . N 3 HOH B 5 3512 3512 HOH TIP . N 3 HOH B 6 3520 3520 HOH TIP . N 3 HOH B 7 3521 3521 HOH TIP . N 3 HOH B 8 3537 3537 HOH TIP . N 3 HOH B 9 3538 3538 HOH TIP . N 3 HOH B 10 3541 3541 HOH TIP . N 3 HOH B 11 3548 3548 HOH TIP . N 3 HOH B 12 3549 3549 HOH TIP . N 3 HOH B 13 3555 3555 HOH TIP . N 3 HOH B 14 3567 3567 HOH TIP . N 3 HOH B 15 3572 3572 HOH TIP . N 3 HOH B 16 3578 3578 HOH TIP . N 3 HOH B 17 3597 3597 HOH TIP . N 3 HOH B 18 3600 3600 HOH TIP . N 3 HOH B 19 3602 3602 HOH TIP . N 3 HOH B 20 3619 3619 HOH TIP . N 3 HOH B 21 3620 3620 HOH TIP . N 3 HOH B 22 3621 3621 HOH TIP . N 3 HOH B 23 3622 3622 HOH TIP . N 3 HOH B 24 3623 3623 HOH TIP . N 3 HOH B 25 3650 3650 HOH TIP . O 3 HOH C 1 3507 3507 HOH TIP . O 3 HOH C 2 3514 3514 HOH TIP . O 3 HOH C 3 3518 3518 HOH TIP . O 3 HOH C 4 3525 3525 HOH TIP . O 3 HOH C 5 3534 3534 HOH TIP . O 3 HOH C 6 3547 3547 HOH TIP . O 3 HOH C 7 3556 3556 HOH TIP . O 3 HOH C 8 3558 3558 HOH TIP . O 3 HOH C 9 3568 3568 HOH TIP . O 3 HOH C 10 3573 3573 HOH TIP . O 3 HOH C 11 3580 3580 HOH TIP . O 3 HOH C 12 3585 3585 HOH TIP . O 3 HOH C 13 3590 3590 HOH TIP . O 3 HOH C 14 3592 3592 HOH TIP . O 3 HOH C 15 3609 3609 HOH TIP . O 3 HOH C 16 3625 3625 HOH TIP . O 3 HOH C 17 3626 3626 HOH TIP . O 3 HOH C 18 3627 3627 HOH TIP . O 3 HOH C 19 3629 3629 HOH TIP . O 3 HOH C 20 3648 3648 HOH TIP . O 3 HOH C 21 3649 3649 HOH TIP . P 3 HOH D 1 3504 3504 HOH TIP . P 3 HOH D 2 3506 3506 HOH TIP . P 3 HOH D 3 3511 3511 HOH TIP . P 3 HOH D 4 3513 3513 HOH TIP . P 3 HOH D 5 3515 3515 HOH TIP . P 3 HOH D 6 3526 3526 HOH TIP . P 3 HOH D 7 3532 3532 HOH TIP . P 3 HOH D 8 3540 3540 HOH TIP . P 3 HOH D 9 3543 3543 HOH TIP . P 3 HOH D 10 3552 3552 HOH TIP . P 3 HOH D 11 3554 3554 HOH TIP . P 3 HOH D 12 3562 3562 HOH TIP . P 3 HOH D 13 3564 3564 HOH TIP . P 3 HOH D 14 3566 3566 HOH TIP . P 3 HOH D 15 3570 3570 HOH TIP . P 3 HOH D 16 3571 3571 HOH TIP . P 3 HOH D 17 3582 3582 HOH TIP . P 3 HOH D 18 3587 3587 HOH TIP . P 3 HOH D 19 3591 3591 HOH TIP . P 3 HOH D 20 3603 3603 HOH TIP . P 3 HOH D 21 3628 3628 HOH TIP . P 3 HOH D 22 3630 3630 HOH TIP . P 3 HOH D 23 3642 3642 HOH TIP . P 3 HOH D 24 3645 3645 HOH TIP . Q 3 HOH E 1 3501 3501 HOH TIP . Q 3 HOH E 2 3517 3517 HOH TIP . Q 3 HOH E 3 3519 3519 HOH TIP . Q 3 HOH E 4 3528 3528 HOH TIP . Q 3 HOH E 5 3529 3529 HOH TIP . Q 3 HOH E 6 3530 3530 HOH TIP . Q 3 HOH E 7 3533 3533 HOH TIP . Q 3 HOH E 8 3551 3551 HOH TIP . Q 3 HOH E 9 3553 3553 HOH TIP . Q 3 HOH E 10 3565 3565 HOH TIP . Q 3 HOH E 11 3576 3576 HOH TIP . Q 3 HOH E 12 3577 3577 HOH TIP . Q 3 HOH E 13 3579 3579 HOH TIP . Q 3 HOH E 14 3589 3589 HOH TIP . Q 3 HOH E 15 3595 3595 HOH TIP . Q 3 HOH E 16 3596 3596 HOH TIP . Q 3 HOH E 17 3605 3605 HOH TIP . Q 3 HOH E 18 3631 3631 HOH TIP . Q 3 HOH E 19 3632 3632 HOH TIP . Q 3 HOH E 20 3644 3644 HOH TIP . Q 3 HOH E 21 3647 3647 HOH TIP . R 3 HOH F 1 3502 3502 HOH TIP . R 3 HOH F 2 3509 3509 HOH TIP . R 3 HOH F 3 3531 3531 HOH TIP . R 3 HOH F 4 3535 3535 HOH TIP . R 3 HOH F 5 3542 3542 HOH TIP . R 3 HOH F 6 3544 3544 HOH TIP . R 3 HOH F 7 3545 3545 HOH TIP . R 3 HOH F 8 3546 3546 HOH TIP . R 3 HOH F 9 3557 3557 HOH TIP . R 3 HOH F 10 3559 3559 HOH TIP . R 3 HOH F 11 3560 3560 HOH TIP . R 3 HOH F 12 3569 3569 HOH TIP . R 3 HOH F 13 3581 3581 HOH TIP . R 3 HOH F 14 3583 3583 HOH TIP . R 3 HOH F 15 3588 3588 HOH TIP . R 3 HOH F 16 3606 3606 HOH TIP . R 3 HOH F 17 3607 3607 HOH TIP . R 3 HOH F 18 3633 3633 HOH TIP . R 3 HOH F 19 3634 3634 HOH TIP . R 3 HOH F 20 3635 3635 HOH TIP . R 3 HOH F 21 3637 3637 HOH TIP . R 3 HOH F 22 3638 3638 HOH TIP . R 3 HOH F 23 3640 3640 HOH TIP . R 3 HOH F 24 3641 3641 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A ACO . . . G 2 76.507 8.195 18.7 0.7 41.5 ? N1A ACO 301 A 1 HETATM 2 C C2A ACO . . . G 2 77.41 7.219 18.287 0.7 40.49 ? C2A ACO 301 A 1 HETATM 3 N N3A ACO . . . G 2 78.129 6.438 19.044 0.7 42.95 ? N3A ACO 301 A 1 HETATM 4 C C4A ACO . . . G 2 77.896 6.657 20.382 0.7 43.06 ? C4A ACO 301 A 1 HETATM 5 C C5A ACO . . . G 2 77.046 7.575 20.972 0.7 40.2 ? C5A ACO 301 A 1 HETATM 6 C C6A ACO . . . G 2 76.292 8.388 20.054 0.7 39.23 ? C6A ACO 301 A 1 HETATM 7 N N6A ACO . . . G 2 75.43 9.324 20.444 0.7 41.39 ? N6A ACO 301 A 1 HETATM 8 N N7A ACO . . . G 2 77.114 7.463 22.351 0.7 41.89 ? N7A ACO 301 A 1 HETATM 9 C C8A ACO . . . G 2 78.039 6.474 22.582 0.7 45.63 ? C8A ACO 301 A 1 HETATM 10 N N9A ACO . . . G 2 78.501 6 21.405 0.7 47.02 ? N9A ACO 301 A 1 HETATM 11 C C1B ACO . . . G 2 79.47 4.963 21.04 0.7 51.46 ? C1B ACO 301 A 1 HETATM 12 C C2B ACO . . . G 2 80.677 4.877 21.966 0.7 53.41 ? C2B ACO 301 A 1 HETATM 13 O O2B ACO . . . G 2 81.651 5.884 21.621 0.7 54.11 ? O2B ACO 301 A 1 HETATM 14 C C3B ACO . . . G 2 81.153 3.459 21.779 0.7 54.67 ? C3B ACO 301 A 1 HETATM 15 O O3B ACO . . . G 2 82.126 3.327 20.682 0.7 57.17 ? O3B ACO 301 A 1 HETATM 16 P P3B ACO . . . G 2 82.842 1.955 20.24 0.7 59.99 ? P3B ACO 301 A 1 HETATM 17 O O7A ACO . . . G 2 81.819 0.86 20.123 0.7 56.19 ? O7A ACO 301 A 1 HETATM 18 O O8A ACO . . . G 2 83.94 1.614 21.193 0.7 58.66 ? O8A ACO 301 A 1 HETATM 19 O O9A ACO . . . G 2 83.478 2.086 18.938 0.7 59.7 ? O9A ACO 301 A 1 HETATM 20 C C4B ACO . . . G 2 79.831 2.708 21.543 0.7 55.04 ? C4B ACO 301 A 1 HETATM 21 O O4B ACO . . . G 2 78.869 3.712 21.109 0.7 54.43 ? O4B ACO 301 A 1 HETATM 22 C C5B ACO . . . G 2 79.254 2.013 22.784 0.7 55.84 ? C5B ACO 301 A 1 HETATM 23 O O5B ACO . . . G 2 78.964 2.968 23.836 0.7 59.27 ? O5B ACO 301 A 1 HETATM 24 P P1A ACO . . . G 2 78.83 2.388 25.345 0.7 60.32 ? P1A ACO 301 A 1 HETATM 25 O O1A ACO . . . G 2 79.219 3.4 26.344 0.7 61.71 ? O1A ACO 301 A 1 HETATM 26 O O2A ACO . . . G 2 79.777 1.303 25.563 0.7 61.07 ? O2A ACO 301 A 1 HETATM 27 O O3A ACO . . . G 2 77.329 1.829 25.42 0.7 56.26 ? O3A ACO 301 A 1 HETATM 28 P P2A ACO . . . G 2 76.064 1.935 26.45 0.7 57.06 ? P2A ACO 301 A 1 HETATM 29 O O4A ACO . . . G 2 76.416 2.294 27.788 0.7 57.71 ? O4A ACO 301 A 1 HETATM 30 O O5A ACO . . . G 2 75.507 0.65 26.804 0.7 56.85 ? O5A ACO 301 A 1 HETATM 31 O O6A ACO . . . G 2 75.14 3.057 25.56 0.7 53.79 ? O6A ACO 301 A 1 HETATM 32 C CBP ACO . . . G 2 75.241 4.446 26.087 0.7 49.51 ? CBP ACO 301 A 1 HETATM 33 C CCP ACO . . . G 2 73.849 5.184 26.118 0.7 46.57 ? CCP ACO 301 A 1 HETATM 34 C CDP ACO . . . G 2 73.244 5.293 24.763 0.7 44.75 ? CDP ACO 301 A 1 HETATM 35 C CEP ACO . . . G 2 72.832 4.381 26.942 0.7 46.84 ? CEP ACO 301 A 1 HETATM 36 C CAP ACO . . . G 2 74.125 6.623 26.77 0.7 45.58 ? CAP ACO 301 A 1 HETATM 37 O OAP ACO . . . G 2 75.144 7.296 25.967 0.7 46.49 ? OAP ACO 301 A 1 HETATM 38 C C9P ACO . . . G 2 72.949 7.624 26.772 0.7 44.42 ? C9P ACO 301 A 1 HETATM 39 O O9P ACO . . . G 2 72.829 8.318 25.762 0.7 44.13 ? O9P ACO 301 A 1 HETATM 40 N N8P ACO . . . G 2 72.128 7.769 27.811 0.7 42.5 ? N8P ACO 301 A 1 HETATM 41 C C7P ACO . . . G 2 71.072 8.885 27.532 0.7 42.69 ? C7P ACO 301 A 1 HETATM 42 C C6P ACO . . . G 2 69.795 9.105 28.356 0.7 44.31 ? C6P ACO 301 A 1 HETATM 43 C C5P ACO . . . G 2 69.452 10.604 28.779 0.7 42.12 ? C5P ACO 301 A 1 HETATM 44 O O5P ACO . . . G 2 70.026 11.643 28.292 0.7 39.89 ? O5P ACO 301 A 1 HETATM 45 N N4P ACO . . . G 2 68.41 10.494 29.67 0.7 45.3 ? N4P ACO 301 A 1 HETATM 46 C C3P ACO . . . G 2 67.526 11.423 30.535 0.7 46.15 ? C3P ACO 301 A 1 HETATM 47 C C2P ACO . . . G 2 67.162 10.555 31.811 0.7 48.85 ? C2P ACO 301 A 1 HETATM 48 S S1P ACO . . . G 2 65.446 9.665 32.088 0.7 57.27 ? S1P ACO 301 A 1 HETATM 49 C C ACO . . . G 2 64.528 9.58 30.507 0.7 53.19 ? C ACO 301 A 1 HETATM 50 O O ACO . . . G 2 65.057 8.96 29.482 0.7 54.21 ? O ACO 301 A 1 HETATM 51 C CH3 ACO . . . G 2 63.121 10.235 30.38 0.7 51.3 ? CH3 ACO 301 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 355 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 51 #