data_1KKL # _model_server_result.job_id ggiGdxSTPM0QAetaga1-tQ _model_server_result.datetime_utc '2024-12-26 11:27:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1kkl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":403}' # _entry.id 1KKL # _exptl.entry_id 1KKL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1KKL _cell.length_a 81.135 _cell.length_b 81.135 _cell.length_c 253.192 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KKL _symmetry.cell_setting ? _symmetry.Int_Tables_number 153 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 1 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 x,x-y,-z 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 H N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 48 A SER 162 1_555 G CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.892 ? metalc ? metalc2 A O GLU 90 A GLU 204 1_555 G CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.793 ? metalc ? metalc3 A OE1 GLU 90 A GLU 204 1_555 G CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.845 ? metalc ? metalc4 B OG SER 48 B SER 162 1_555 H CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.806 ? metalc ? metalc5 B O GLU 90 B GLU 204 1_555 H CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.067 ? metalc ? metalc6 B OE1 GLU 90 B GLU 204 1_555 H CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.134 ? metalc ? metalc7 C OG SER 48 C SER 162 1_555 I CA CA . C CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.819 ? metalc ? metalc8 C OE1 GLU 90 C GLU 204 1_555 I CA CA . C CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.755 ? metalc ? metalc9 C O GLU 90 C GLU 204 1_555 I CA CA . C CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1KKL _atom_sites.fract_transf_matrix[1][1] 0.012325 _atom_sites.fract_transf_matrix[1][2] 0.007116 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014232 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00395 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 CA A 1 401 401 CA CA . H 3 CA B 1 402 401 CA CA . I 3 CA C 1 403 401 CA CA . J 4 HOH A 1 402 6 HOH HOH . J 4 HOH A 2 403 7 HOH HOH . J 4 HOH A 3 404 9 HOH HOH . J 4 HOH A 4 405 18 HOH HOH . J 4 HOH A 5 406 19 HOH HOH . J 4 HOH A 6 407 20 HOH HOH . J 4 HOH A 7 408 21 HOH HOH . J 4 HOH A 8 409 22 HOH HOH . J 4 HOH A 9 410 23 HOH HOH . J 4 HOH A 10 411 24 HOH HOH . J 4 HOH A 11 412 25 HOH HOH . J 4 HOH A 12 413 26 HOH HOH . J 4 HOH A 13 414 27 HOH HOH . J 4 HOH A 14 415 28 HOH HOH . J 4 HOH A 15 416 29 HOH HOH . J 4 HOH A 16 417 30 HOH HOH . J 4 HOH A 17 418 32 HOH HOH . J 4 HOH A 18 419 33 HOH HOH . J 4 HOH A 19 420 34 HOH HOH . J 4 HOH A 20 421 47 HOH HOH . J 4 HOH A 21 422 69 HOH HOH . J 4 HOH A 22 423 70 HOH HOH . J 4 HOH A 23 424 71 HOH HOH . J 4 HOH A 24 425 72 HOH HOH . J 4 HOH A 25 426 73 HOH HOH . J 4 HOH A 26 427 74 HOH HOH . J 4 HOH A 27 428 75 HOH HOH . J 4 HOH A 28 429 76 HOH HOH . J 4 HOH A 29 430 79 HOH HOH . J 4 HOH A 30 431 81 HOH HOH . J 4 HOH A 31 432 82 HOH HOH . J 4 HOH A 32 433 84 HOH HOH . J 4 HOH A 33 434 86 HOH HOH . J 4 HOH A 34 435 88 HOH HOH . J 4 HOH A 35 436 89 HOH HOH . J 4 HOH A 36 437 90 HOH HOH . J 4 HOH A 37 438 91 HOH HOH . J 4 HOH A 38 439 92 HOH HOH . J 4 HOH A 39 440 93 HOH HOH . J 4 HOH A 40 441 94 HOH HOH . J 4 HOH A 41 442 95 HOH HOH . J 4 HOH A 42 443 99 HOH HOH . J 4 HOH A 43 444 141 HOH HOH . J 4 HOH A 44 445 163 HOH HOH . J 4 HOH A 45 446 174 HOH HOH . J 4 HOH A 46 447 175 HOH HOH . J 4 HOH A 47 448 400 HOH HOH . K 4 HOH B 1 403 4 HOH HOH . K 4 HOH B 2 404 12 HOH HOH . K 4 HOH B 3 405 13 HOH HOH . K 4 HOH B 4 406 17 HOH HOH . K 4 HOH B 5 407 40 HOH HOH . K 4 HOH B 6 408 43 HOH HOH . K 4 HOH B 7 409 44 HOH HOH . K 4 HOH B 8 410 45 HOH HOH . K 4 HOH B 9 411 46 HOH HOH . K 4 HOH B 10 412 48 HOH HOH . K 4 HOH B 11 413 49 HOH HOH . K 4 HOH B 12 414 50 HOH HOH . K 4 HOH B 13 415 51 HOH HOH . K 4 HOH B 14 416 52 HOH HOH . K 4 HOH B 15 417 53 HOH HOH . K 4 HOH B 16 418 54 HOH HOH . K 4 HOH B 17 419 55 HOH HOH . K 4 HOH B 18 420 63 HOH HOH . K 4 HOH B 19 421 67 HOH HOH . K 4 HOH B 20 422 87 HOH HOH . K 4 HOH B 21 423 111 HOH HOH . K 4 HOH B 22 424 112 HOH HOH . K 4 HOH B 23 425 113 HOH HOH . K 4 HOH B 24 426 114 HOH HOH . K 4 HOH B 25 427 115 HOH HOH . K 4 HOH B 26 428 116 HOH HOH . K 4 HOH B 27 429 117 HOH HOH . K 4 HOH B 28 430 118 HOH HOH . K 4 HOH B 29 431 119 HOH HOH . K 4 HOH B 30 432 120 HOH HOH . K 4 HOH B 31 433 121 HOH HOH . K 4 HOH B 32 434 400 HOH HOH . L 4 HOH C 1 404 2 HOH HOH . L 4 HOH C 2 405 3 HOH HOH . L 4 HOH C 3 406 5 HOH HOH . L 4 HOH C 4 407 8 HOH HOH . L 4 HOH C 5 408 14 HOH HOH . L 4 HOH C 6 409 31 HOH HOH . L 4 HOH C 7 410 35 HOH HOH . L 4 HOH C 8 411 42 HOH HOH . L 4 HOH C 9 412 56 HOH HOH . L 4 HOH C 10 413 62 HOH HOH . L 4 HOH C 11 414 64 HOH HOH . L 4 HOH C 12 415 77 HOH HOH . L 4 HOH C 13 416 78 HOH HOH . L 4 HOH C 14 417 80 HOH HOH . L 4 HOH C 15 418 83 HOH HOH . L 4 HOH C 16 419 85 HOH HOH . L 4 HOH C 17 420 108 HOH HOH . L 4 HOH C 18 421 109 HOH HOH . L 4 HOH C 19 422 122 HOH HOH . L 4 HOH C 20 423 123 HOH HOH . L 4 HOH C 21 424 124 HOH HOH . L 4 HOH C 22 425 125 HOH HOH . L 4 HOH C 23 426 126 HOH HOH . L 4 HOH C 24 427 127 HOH HOH . L 4 HOH C 25 428 128 HOH HOH . L 4 HOH C 26 429 129 HOH HOH . L 4 HOH C 27 430 130 HOH HOH . L 4 HOH C 28 431 131 HOH HOH . L 4 HOH C 29 432 132 HOH HOH . L 4 HOH C 30 433 133 HOH HOH . L 4 HOH C 31 434 134 HOH HOH . L 4 HOH C 32 435 135 HOH HOH . L 4 HOH C 33 436 136 HOH HOH . L 4 HOH C 34 437 138 HOH HOH . L 4 HOH C 35 438 139 HOH HOH . L 4 HOH C 36 439 140 HOH HOH . L 4 HOH C 37 440 142 HOH HOH . L 4 HOH C 38 441 143 HOH HOH . L 4 HOH C 39 442 144 HOH HOH . L 4 HOH C 40 443 145 HOH HOH . L 4 HOH C 41 444 146 HOH HOH . L 4 HOH C 42 445 147 HOH HOH . L 4 HOH C 43 446 148 HOH HOH . L 4 HOH C 44 447 165 HOH HOH . L 4 HOH C 45 448 166 HOH HOH . L 4 HOH C 46 449 167 HOH HOH . L 4 HOH C 47 450 168 HOH HOH . L 4 HOH C 48 451 169 HOH HOH . L 4 HOH C 49 452 170 HOH HOH . L 4 HOH C 50 453 172 HOH HOH . L 4 HOH C 51 454 400 HOH HOH . M 4 HOH H 1 89 10 HOH HOH . M 4 HOH H 2 90 11 HOH HOH . M 4 HOH H 3 91 36 HOH HOH . M 4 HOH H 4 92 37 HOH HOH . M 4 HOH H 5 93 38 HOH HOH . M 4 HOH H 6 94 39 HOH HOH . M 4 HOH H 7 95 96 HOH HOH . M 4 HOH H 8 96 97 HOH HOH . M 4 HOH H 9 97 98 HOH HOH . M 4 HOH H 10 98 100 HOH HOH . M 4 HOH H 11 99 101 HOH HOH . M 4 HOH H 12 100 102 HOH HOH . M 4 HOH H 13 101 103 HOH HOH . M 4 HOH H 14 102 104 HOH HOH . M 4 HOH H 15 103 105 HOH HOH . M 4 HOH H 16 104 137 HOH HOH . M 4 HOH H 17 105 161 HOH HOH . M 4 HOH H 18 106 164 HOH HOH . M 4 HOH H 19 107 173 HOH HOH . N 4 HOH I 1 89 41 HOH HOH . N 4 HOH I 2 90 57 HOH HOH . N 4 HOH I 3 91 58 HOH HOH . N 4 HOH I 4 92 59 HOH HOH . N 4 HOH I 5 93 60 HOH HOH . N 4 HOH I 6 94 61 HOH HOH . N 4 HOH I 7 95 110 HOH HOH . N 4 HOH I 8 96 149 HOH HOH . N 4 HOH I 9 97 150 HOH HOH . N 4 HOH I 10 98 151 HOH HOH . N 4 HOH I 11 99 152 HOH HOH . N 4 HOH I 12 100 153 HOH HOH . N 4 HOH I 13 101 154 HOH HOH . N 4 HOH I 14 102 162 HOH HOH . N 4 HOH I 15 103 171 HOH HOH . O 4 HOH J 1 89 1 HOH HOH . O 4 HOH J 2 90 15 HOH HOH . O 4 HOH J 3 91 16 HOH HOH . O 4 HOH J 4 92 65 HOH HOH . O 4 HOH J 5 93 66 HOH HOH . O 4 HOH J 6 94 106 HOH HOH . O 4 HOH J 7 95 107 HOH HOH . O 4 HOH J 8 96 155 HOH HOH . O 4 HOH J 9 97 156 HOH HOH . O 4 HOH J 10 98 157 HOH HOH . O 4 HOH J 11 99 158 HOH HOH . O 4 HOH J 12 100 159 HOH HOH . O 4 HOH J 13 101 160 HOH HOH . O 4 HOH J 14 102 176 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 3 _atom_site.Cartn_x 44.548 _atom_site.Cartn_y 10.734 _atom_site.Cartn_z 22.63 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 54.96 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 403 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 75 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #