data_1KMN
#
_model_server_result.job_id            Azs9FgNo67L9_tXQuJpQTQ 
_model_server_result.datetime_utc      '2025-03-15 18:12:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1kmn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":451}' 
#
_entry.id    1KMN 
#
_exptl.entry_id    1KMN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              142.179 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            L-histidinol 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         114.1 
_cell.angle_beta          97.4 
_cell.angle_gamma         90 
_cell.entry_id            1KMN 
_cell.length_a            60.9 
_cell.length_b            107.3 
_cell.length_c            107.2 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1KMN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,M,N 1 1 
C,D,I,J,K,L,O,P 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 I N N 
? 2 K N N 
#
_chem_comp.formula           'C6 H12 N3 O 1' 
_chem_comp.formula_weight    142.179 
_chem_comp.id                HSO 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              L-histidinol 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA HSO sing 201 n n 
CE1 NE2 HSO sing 202 n y 
CE1 ND1 HSO doub 203 n y 
NE2 CD2 HSO sing 204 n y 
CA C HSO sing 205 n n 
CA CB HSO sing 206 n n 
ND1 CG HSO sing 207 n y 
CD2 CG HSO doub 208 n y 
O C HSO sing 209 n n 
CG CB HSO sing 210 n n 
N H HSO sing 211 n n 
N H2 HSO sing 212 n n 
CA HA HSO sing 213 n n 
CB HB2 HSO sing 214 n n 
CB HB3 HSO sing 215 n n 
ND1 HD1 HSO sing 216 n n 
CD2 HD2 HSO sing 217 n n 
CE1 HE1 HSO sing 218 n n 
NE2 HE2 HSO sing 219 n n 
C H1 HSO sing 220 n n 
C H11 HSO sing 221 n n 
O HO HSO sing 222 n n 
#
_atom_sites.entry_id                     1KMN 
_atom_sites.fract_transf_matrix[1][1]    0.01642 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00234 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00932 
_atom_sites.fract_transf_matrix[2][3]    0.004211 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010322 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 HSO A 1 451 451 HSO HSO . 
F 3 ATP A 1 452 452 ATP ATP . 
G 2 HSO B 1 451 451 HSO HSO . 
H 3 ATP B 1 452 452 ATP ATP . 
I 2 HSO C 1 451 451 HSO HSO . 
J 3 ATP C 1 452 452 ATP ATP . 
K 2 HSO D 1 451 451 HSO HSO . 
L 3 ATP D 1 452 452 ATP ATP . 
M 4 HOH A 1 508 508 HOH HOH . 
M 4 HOH A 2 511 511 HOH HOH . 
M 4 HOH A 3 513 513 HOH HOH . 
M 4 HOH A 4 514 514 HOH HOH . 
M 4 HOH A 5 515 515 HOH HOH . 
M 4 HOH A 6 516 516 HOH HOH . 
M 4 HOH A 7 517 517 HOH HOH . 
M 4 HOH A 8 518 518 HOH HOH . 
M 4 HOH A 9 519 519 HOH HOH . 
M 4 HOH A 10 520 520 HOH HOH . 
M 4 HOH A 11 521 521 HOH HOH . 
M 4 HOH A 12 523 523 HOH HOH . 
M 4 HOH A 13 524 524 HOH HOH . 
N 4 HOH B 1 504 504 HOH HOH . 
N 4 HOH B 2 506 506 HOH HOH . 
N 4 HOH B 3 507 507 HOH HOH . 
N 4 HOH B 4 512 512 HOH HOH . 
N 4 HOH B 5 522 522 HOH HOH . 
O 4 HOH C 1 501 501 HOH HOH . 
O 4 HOH C 2 502 502 HOH HOH . 
O 4 HOH C 3 509 509 HOH HOH . 
O 4 HOH C 4 510 510 HOH HOH . 
P 4 HOH D 1 503 503 HOH HOH . 
P 4 HOH D 2 505 505 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N HSO . . . E 2 -13.563 20.699 15.681 1 33.01 ? N HSO 451 A 1 
HETATM 2 C CA HSO . . . E 2 -12.998 21.96 16.146 1 32.61 ? CA HSO 451 A 1 
HETATM 3 C CB HSO . . . E 2 -13.877 22.525 17.262 1 30.4 ? CB HSO 451 A 1 
HETATM 4 C CG HSO . . . E 2 -15.229 22.904 16.778 1 27.4 ? CG HSO 451 A 1 
HETATM 5 N ND1 HSO . . . E 2 -15.505 24.168 16.309 1 28.72 ? ND1 HSO 451 A 1 
HETATM 6 C CD2 HSO . . . E 2 -16.29 22.137 16.442 1 26.62 ? CD2 HSO 451 A 1 
HETATM 7 C CE1 HSO . . . E 2 -16.674 24.166 15.686 1 28.12 ? CE1 HSO 451 A 1 
HETATM 8 N NE2 HSO . . . E 2 -17.165 22.94 15.751 1 28.29 ? NE2 HSO 451 A 1 
HETATM 9 C C HSO . . . E 2 -11.549 21.861 16.582 1 34.23 ? C HSO 451 A 1 
HETATM 10 O O HSO . . . E 2 -10.97 20.773 16.577 1 37.73 ? O HSO 451 A 1 
HETATM 11 H H HSO . . . E 2 -13.746 20.559 14.74 1 0 ? H HSO 451 A 1 
HETATM 12 H HD1 HSO . . . E 2 -14.963 24.956 16.416 1 0 ? HD1 HSO 451 A 1 
HETATM 13 H HE2 HSO . . . E 2 -18.008 22.663 15.369 1 0 ? HE2 HSO 451 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    24 
_model_server_stats.query_time_ms           278 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           13 
#