data_1KOQ # _model_server_result.job_id 5co3B2HA474LtbbJgYJzfw _model_server_result.datetime_utc '2024-11-17 20:30:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1koq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 1KOQ # _exptl.entry_id 1KOQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.87 _cell.angle_gamma 90 _cell.entry_id 1KOQ _cell.length_a 47.23 _cell.length_b 74.94 _cell.length_c 62.38 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KOQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 25 A CYS 28 1_555 A SG CYS 178 A CYS 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf2 B SG CYS 25 B CYS 28 1_555 B SG CYS 178 B CYS 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc1 A NE2 HIS 89 A HIS 92 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc2 A NE2 HIS 91 A HIS 94 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? metalc ? metalc3 A ND1 HIS 108 A HIS 111 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc4 C ZN ZN . A ZN 301 1_555 E O HOH . A HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc5 B NE2 HIS 89 B HIS 92 1_555 D ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc6 B NE2 HIS 91 B HIS 94 1_555 D ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc7 B ND1 HIS 108 B HIS 111 1_555 D ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc8 D ZN ZN . B ZN 302 1_555 F O HOH . B HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1KOQ _atom_sites.fract_transf_matrix[1][1] 0.021173 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001432 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013344 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016067 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 301 301 ZN ZN . D 2 ZN B 1 302 302 ZN ZN . E 3 HOH A 1 303 303 HOH HOH . E 3 HOH A 2 304 304 HOH HOH . E 3 HOH A 3 308 308 HOH HOH . E 3 HOH A 4 309 309 HOH HOH . E 3 HOH A 5 310 310 HOH HOH . E 3 HOH A 6 314 314 HOH HOH . E 3 HOH A 7 316 316 HOH HOH . E 3 HOH A 8 320 320 HOH HOH . E 3 HOH A 9 321 321 HOH HOH . E 3 HOH A 10 324 324 HOH HOH . E 3 HOH A 11 325 325 HOH HOH . E 3 HOH A 12 326 326 HOH HOH . E 3 HOH A 13 327 327 HOH HOH . E 3 HOH A 14 329 329 HOH HOH . E 3 HOH A 15 332 332 HOH HOH . E 3 HOH A 16 333 333 HOH HOH . E 3 HOH A 17 335 335 HOH HOH . E 3 HOH A 18 336 336 HOH HOH . E 3 HOH A 19 337 337 HOH HOH . E 3 HOH A 20 338 338 HOH HOH . E 3 HOH A 21 339 339 HOH HOH . E 3 HOH A 22 342 342 HOH HOH . E 3 HOH A 23 343 343 HOH HOH . E 3 HOH A 24 346 346 HOH HOH . E 3 HOH A 25 350 350 HOH HOH . E 3 HOH A 26 357 357 HOH HOH . E 3 HOH A 27 358 358 HOH HOH . E 3 HOH A 28 360 360 HOH HOH . E 3 HOH A 29 361 361 HOH HOH . E 3 HOH A 30 363 363 HOH HOH . E 3 HOH A 31 371 371 HOH HOH . E 3 HOH A 32 377 377 HOH HOH . E 3 HOH A 33 382 382 HOH HOH . E 3 HOH A 34 383 383 HOH HOH . E 3 HOH A 35 385 385 HOH HOH . E 3 HOH A 36 388 388 HOH HOH . E 3 HOH A 37 389 389 HOH HOH . E 3 HOH A 38 390 390 HOH HOH . E 3 HOH A 39 391 391 HOH HOH . E 3 HOH A 40 392 392 HOH HOH . E 3 HOH A 41 393 393 HOH HOH . E 3 HOH A 42 395 395 HOH HOH . E 3 HOH A 43 399 399 HOH HOH . E 3 HOH A 44 401 401 HOH HOH . E 3 HOH A 45 402 402 HOH HOH . E 3 HOH A 46 403 403 HOH HOH . E 3 HOH A 47 405 405 HOH HOH . E 3 HOH A 48 406 406 HOH HOH . E 3 HOH A 49 412 412 HOH HOH . E 3 HOH A 50 415 415 HOH HOH . E 3 HOH A 51 416 416 HOH HOH . E 3 HOH A 52 419 419 HOH HOH . E 3 HOH A 53 422 422 HOH HOH . E 3 HOH A 54 423 423 HOH HOH . E 3 HOH A 55 425 425 HOH HOH . E 3 HOH A 56 428 428 HOH HOH . E 3 HOH A 57 433 433 HOH HOH . E 3 HOH A 58 438 438 HOH HOH . E 3 HOH A 59 439 439 HOH HOH . E 3 HOH A 60 442 442 HOH HOH . E 3 HOH A 61 445 445 HOH HOH . E 3 HOH A 62 448 448 HOH HOH . E 3 HOH A 63 451 451 HOH HOH . E 3 HOH A 64 454 454 HOH HOH . E 3 HOH A 65 458 458 HOH HOH . E 3 HOH A 66 460 460 HOH HOH . E 3 HOH A 67 461 461 HOH HOH . E 3 HOH A 68 466 466 HOH HOH . E 3 HOH A 69 471 471 HOH HOH . E 3 HOH A 70 472 472 HOH HOH . E 3 HOH A 71 473 473 HOH HOH . E 3 HOH A 72 474 474 HOH HOH . E 3 HOH A 73 477 477 HOH HOH . F 3 HOH B 1 305 305 HOH HOH . F 3 HOH B 2 306 306 HOH HOH . F 3 HOH B 3 307 307 HOH HOH . F 3 HOH B 4 311 311 HOH HOH . F 3 HOH B 5 312 312 HOH HOH . F 3 HOH B 6 313 313 HOH HOH . F 3 HOH B 7 315 315 HOH HOH . F 3 HOH B 8 317 317 HOH HOH . F 3 HOH B 9 318 318 HOH HOH . F 3 HOH B 10 319 319 HOH HOH . F 3 HOH B 11 322 322 HOH HOH . F 3 HOH B 12 323 323 HOH HOH . F 3 HOH B 13 328 328 HOH HOH . F 3 HOH B 14 330 330 HOH HOH . F 3 HOH B 15 331 331 HOH HOH . F 3 HOH B 16 334 334 HOH HOH . F 3 HOH B 17 340 340 HOH HOH . F 3 HOH B 18 341 341 HOH HOH . F 3 HOH B 19 344 344 HOH HOH . F 3 HOH B 20 345 345 HOH HOH . F 3 HOH B 21 347 347 HOH HOH . F 3 HOH B 22 348 348 HOH HOH . F 3 HOH B 23 349 349 HOH HOH . F 3 HOH B 24 352 352 HOH HOH . F 3 HOH B 25 353 353 HOH HOH . F 3 HOH B 26 356 356 HOH HOH . F 3 HOH B 27 359 359 HOH HOH . F 3 HOH B 28 362 362 HOH HOH . F 3 HOH B 29 364 364 HOH HOH . F 3 HOH B 30 366 366 HOH HOH . F 3 HOH B 31 367 367 HOH HOH . F 3 HOH B 32 368 368 HOH HOH . F 3 HOH B 33 370 370 HOH HOH . F 3 HOH B 34 373 373 HOH HOH . F 3 HOH B 35 375 375 HOH HOH . F 3 HOH B 36 376 376 HOH HOH . F 3 HOH B 37 378 378 HOH HOH . F 3 HOH B 38 379 379 HOH HOH . F 3 HOH B 39 380 380 HOH HOH . F 3 HOH B 40 381 381 HOH HOH . F 3 HOH B 41 384 384 HOH HOH . F 3 HOH B 42 386 386 HOH HOH . F 3 HOH B 43 387 387 HOH HOH . F 3 HOH B 44 394 394 HOH HOH . F 3 HOH B 45 396 396 HOH HOH . F 3 HOH B 46 397 397 HOH HOH . F 3 HOH B 47 398 398 HOH HOH . F 3 HOH B 48 407 407 HOH HOH . F 3 HOH B 49 408 408 HOH HOH . F 3 HOH B 50 411 411 HOH HOH . F 3 HOH B 51 413 413 HOH HOH . F 3 HOH B 52 414 414 HOH HOH . F 3 HOH B 53 420 420 HOH HOH . F 3 HOH B 54 421 421 HOH HOH . F 3 HOH B 55 424 424 HOH HOH . F 3 HOH B 56 426 426 HOH HOH . F 3 HOH B 57 429 429 HOH HOH . F 3 HOH B 58 430 430 HOH HOH . F 3 HOH B 59 434 434 HOH HOH . F 3 HOH B 60 435 435 HOH HOH . F 3 HOH B 61 436 436 HOH HOH . F 3 HOH B 62 437 437 HOH HOH . F 3 HOH B 63 441 441 HOH HOH . F 3 HOH B 64 443 443 HOH HOH . F 3 HOH B 65 444 444 HOH HOH . F 3 HOH B 66 447 447 HOH HOH . F 3 HOH B 67 453 453 HOH HOH . F 3 HOH B 68 455 455 HOH HOH . F 3 HOH B 69 459 459 HOH HOH . F 3 HOH B 70 463 463 HOH HOH . F 3 HOH B 71 464 464 HOH HOH . F 3 HOH B 72 468 468 HOH HOH . F 3 HOH B 73 469 469 HOH HOH . F 3 HOH B 74 470 470 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 7.932 _atom_site.Cartn_y 19.639 _atom_site.Cartn_z 65.909 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 23.7 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 302 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 209 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #