data_1KP2 # _model_server_result.job_id uixdGu1hDNykDe5cmtu4Ww _model_server_result.datetime_utc '2025-01-11 14:47:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1kp2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":458}' # _entry.id 1KP2 # _exptl.entry_id 1KP2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1KP2 _cell.length_a 78.059 _cell.length_b 104.05 _cell.length_c 128.573 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KP2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 78.059 0 0 3 'crystal symmetry operation' 3_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 78.059 0 128.573 4 'crystal symmetry operation' 4_556 x,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 128.573 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 317 n n P O2 PO4 sing 318 n n P O3 PO4 sing 319 n n P O4 PO4 sing 320 n n # _atom_sites.entry_id 1KP2 _atom_sites.fract_transf_matrix[1][1] 0.012811 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009611 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007778 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 456 2 PO4 PO4 . C 2 PO4 A 1 457 3 PO4 PO4 . D 2 PO4 A 1 458 4 PO4 PO4 . E 3 ATP A 1 459 1 ATP ATP . F 4 GAI A 1 460 5 GAI GAI . G 5 HOH A 1 461 1 HOH HOH . G 5 HOH A 2 462 2 HOH HOH . G 5 HOH A 3 463 3 HOH HOH . G 5 HOH A 4 464 4 HOH HOH . G 5 HOH A 5 465 5 HOH HOH . G 5 HOH A 6 466 6 HOH HOH . G 5 HOH A 7 467 7 HOH HOH . G 5 HOH A 8 468 8 HOH HOH . G 5 HOH A 9 469 9 HOH HOH . G 5 HOH A 10 470 10 HOH HOH . G 5 HOH A 11 471 11 HOH HOH . G 5 HOH A 12 472 12 HOH HOH . G 5 HOH A 13 473 13 HOH HOH . G 5 HOH A 14 474 14 HOH HOH . G 5 HOH A 15 475 15 HOH HOH . G 5 HOH A 16 476 16 HOH HOH . G 5 HOH A 17 477 17 HOH HOH . G 5 HOH A 18 478 18 HOH HOH . G 5 HOH A 19 479 19 HOH HOH . G 5 HOH A 20 480 20 HOH HOH . G 5 HOH A 21 481 21 HOH HOH . G 5 HOH A 22 482 22 HOH HOH . G 5 HOH A 23 483 23 HOH HOH . G 5 HOH A 24 484 24 HOH HOH . G 5 HOH A 25 485 25 HOH HOH . G 5 HOH A 26 486 26 HOH HOH . G 5 HOH A 27 487 27 HOH HOH . G 5 HOH A 28 488 28 HOH HOH . G 5 HOH A 29 489 29 HOH HOH . G 5 HOH A 30 490 30 HOH HOH . G 5 HOH A 31 491 31 HOH HOH . G 5 HOH A 32 492 32 HOH HOH . G 5 HOH A 33 493 33 HOH HOH . G 5 HOH A 34 494 34 HOH HOH . G 5 HOH A 35 495 35 HOH HOH . G 5 HOH A 36 496 36 HOH HOH . G 5 HOH A 37 497 37 HOH HOH . G 5 HOH A 38 498 38 HOH HOH . G 5 HOH A 39 499 39 HOH HOH . G 5 HOH A 40 500 40 HOH HOH . G 5 HOH A 41 501 41 HOH HOH . G 5 HOH A 42 502 42 HOH HOH . G 5 HOH A 43 503 43 HOH HOH . G 5 HOH A 44 504 44 HOH HOH . G 5 HOH A 45 505 45 HOH HOH . G 5 HOH A 46 506 46 HOH HOH . G 5 HOH A 47 507 47 HOH HOH . G 5 HOH A 48 508 48 HOH HOH . G 5 HOH A 49 509 49 HOH HOH . G 5 HOH A 50 510 50 HOH HOH . G 5 HOH A 51 511 51 HOH HOH . G 5 HOH A 52 512 52 HOH HOH . G 5 HOH A 53 513 53 HOH HOH . G 5 HOH A 54 514 54 HOH HOH . G 5 HOH A 55 515 55 HOH HOH . G 5 HOH A 56 516 56 HOH HOH . G 5 HOH A 57 517 57 HOH HOH . G 5 HOH A 58 518 58 HOH HOH . G 5 HOH A 59 519 59 HOH HOH . G 5 HOH A 60 520 60 HOH HOH . G 5 HOH A 61 521 61 HOH HOH . G 5 HOH A 62 522 62 HOH HOH . G 5 HOH A 63 523 63 HOH HOH . G 5 HOH A 64 524 64 HOH HOH . G 5 HOH A 65 525 65 HOH HOH . G 5 HOH A 66 526 66 HOH HOH . G 5 HOH A 67 527 67 HOH HOH . G 5 HOH A 68 528 68 HOH HOH . G 5 HOH A 69 529 69 HOH HOH . G 5 HOH A 70 530 70 HOH HOH . G 5 HOH A 71 531 71 HOH HOH . G 5 HOH A 72 532 72 HOH HOH . G 5 HOH A 73 533 73 HOH HOH . G 5 HOH A 74 534 74 HOH HOH . G 5 HOH A 75 535 75 HOH HOH . G 5 HOH A 76 536 76 HOH HOH . G 5 HOH A 77 537 77 HOH HOH . G 5 HOH A 78 538 78 HOH HOH . G 5 HOH A 79 539 79 HOH HOH . G 5 HOH A 80 540 80 HOH HOH . G 5 HOH A 81 541 81 HOH HOH . G 5 HOH A 82 542 82 HOH HOH . G 5 HOH A 83 543 83 HOH HOH . G 5 HOH A 84 544 84 HOH HOH . G 5 HOH A 85 545 85 HOH HOH . G 5 HOH A 86 546 86 HOH HOH . G 5 HOH A 87 547 87 HOH HOH . G 5 HOH A 88 548 88 HOH HOH . G 5 HOH A 89 549 89 HOH HOH . G 5 HOH A 90 550 90 HOH HOH . G 5 HOH A 91 551 91 HOH HOH . G 5 HOH A 92 552 92 HOH HOH . G 5 HOH A 93 553 93 HOH HOH . G 5 HOH A 94 554 94 HOH HOH . G 5 HOH A 95 555 95 HOH HOH . G 5 HOH A 96 556 96 HOH HOH . G 5 HOH A 97 557 97 HOH HOH . G 5 HOH A 98 558 98 HOH HOH . G 5 HOH A 99 559 99 HOH HOH . G 5 HOH A 100 560 100 HOH HOH . G 5 HOH A 101 561 101 HOH HOH . G 5 HOH A 102 562 102 HOH HOH . G 5 HOH A 103 563 103 HOH HOH . G 5 HOH A 104 564 104 HOH HOH . G 5 HOH A 105 565 105 HOH HOH . G 5 HOH A 106 566 106 HOH HOH . G 5 HOH A 107 567 107 HOH HOH . G 5 HOH A 108 568 108 HOH HOH . G 5 HOH A 109 569 109 HOH HOH . G 5 HOH A 110 570 110 HOH HOH . G 5 HOH A 111 571 111 HOH HOH . G 5 HOH A 112 572 112 HOH HOH . G 5 HOH A 113 573 113 HOH HOH . G 5 HOH A 114 574 114 HOH HOH . G 5 HOH A 115 575 115 HOH HOH . G 5 HOH A 116 576 116 HOH HOH . G 5 HOH A 117 577 117 HOH HOH . G 5 HOH A 118 578 118 HOH HOH . G 5 HOH A 119 579 119 HOH HOH . G 5 HOH A 120 580 120 HOH HOH . G 5 HOH A 121 581 121 HOH HOH . G 5 HOH A 122 582 122 HOH HOH . G 5 HOH A 123 583 123 HOH HOH . G 5 HOH A 124 584 124 HOH HOH . G 5 HOH A 125 585 125 HOH HOH . G 5 HOH A 126 586 126 HOH HOH . G 5 HOH A 127 587 127 HOH HOH . G 5 HOH A 128 588 128 HOH HOH . G 5 HOH A 129 589 129 HOH HOH . G 5 HOH A 130 590 130 HOH HOH . G 5 HOH A 131 591 131 HOH HOH . G 5 HOH A 132 592 132 HOH HOH . G 5 HOH A 133 593 133 HOH HOH . G 5 HOH A 134 594 134 HOH HOH . G 5 HOH A 135 595 135 HOH HOH . G 5 HOH A 136 596 136 HOH HOH . G 5 HOH A 137 597 137 HOH HOH . G 5 HOH A 138 598 138 HOH HOH . G 5 HOH A 139 599 139 HOH HOH . G 5 HOH A 140 600 140 HOH HOH . G 5 HOH A 141 601 141 HOH HOH . G 5 HOH A 142 602 142 HOH HOH . G 5 HOH A 143 603 143 HOH HOH . G 5 HOH A 144 604 144 HOH HOH . G 5 HOH A 145 605 145 HOH HOH . G 5 HOH A 146 606 146 HOH HOH . G 5 HOH A 147 607 147 HOH HOH . G 5 HOH A 148 608 148 HOH HOH . G 5 HOH A 149 609 149 HOH HOH . G 5 HOH A 150 610 150 HOH HOH . G 5 HOH A 151 611 151 HOH HOH . G 5 HOH A 152 612 152 HOH HOH . G 5 HOH A 153 613 153 HOH HOH . G 5 HOH A 154 614 154 HOH HOH . G 5 HOH A 155 615 155 HOH HOH . G 5 HOH A 156 616 156 HOH HOH . G 5 HOH A 157 617 157 HOH HOH . G 5 HOH A 158 618 158 HOH HOH . G 5 HOH A 159 619 159 HOH HOH . G 5 HOH A 160 620 160 HOH HOH . G 5 HOH A 161 621 161 HOH HOH . G 5 HOH A 162 622 162 HOH HOH . G 5 HOH A 163 623 163 HOH HOH . G 5 HOH A 164 624 164 HOH HOH . G 5 HOH A 165 625 165 HOH HOH . G 5 HOH A 166 626 166 HOH HOH . G 5 HOH A 167 627 167 HOH HOH . G 5 HOH A 168 628 168 HOH HOH . G 5 HOH A 169 629 169 HOH HOH . G 5 HOH A 170 630 170 HOH HOH . G 5 HOH A 171 631 171 HOH HOH . G 5 HOH A 172 632 172 HOH HOH . G 5 HOH A 173 633 173 HOH HOH . G 5 HOH A 174 634 174 HOH HOH . G 5 HOH A 175 635 175 HOH HOH . G 5 HOH A 176 636 176 HOH HOH . G 5 HOH A 177 637 177 HOH HOH . G 5 HOH A 178 638 178 HOH HOH . G 5 HOH A 179 639 179 HOH HOH . G 5 HOH A 180 640 180 HOH HOH . G 5 HOH A 181 641 181 HOH HOH . G 5 HOH A 182 642 182 HOH HOH . G 5 HOH A 183 643 183 HOH HOH . G 5 HOH A 184 644 184 HOH HOH . G 5 HOH A 185 645 185 HOH HOH . G 5 HOH A 186 646 186 HOH HOH . G 5 HOH A 187 647 187 HOH HOH . G 5 HOH A 188 648 188 HOH HOH . G 5 HOH A 189 649 189 HOH HOH . G 5 HOH A 190 650 190 HOH HOH . G 5 HOH A 191 651 191 HOH HOH . G 5 HOH A 192 652 192 HOH HOH . G 5 HOH A 193 653 193 HOH HOH . G 5 HOH A 194 654 194 HOH HOH . G 5 HOH A 195 655 195 HOH HOH . G 5 HOH A 196 656 196 HOH HOH . G 5 HOH A 197 657 197 HOH HOH . G 5 HOH A 198 658 198 HOH HOH . G 5 HOH A 199 659 199 HOH HOH . G 5 HOH A 200 660 200 HOH HOH . G 5 HOH A 201 661 201 HOH HOH . G 5 HOH A 202 662 202 HOH HOH . G 5 HOH A 203 663 203 HOH HOH . G 5 HOH A 204 664 204 HOH HOH . G 5 HOH A 205 665 205 HOH HOH . G 5 HOH A 206 666 206 HOH HOH . G 5 HOH A 207 667 207 HOH HOH . G 5 HOH A 208 668 208 HOH HOH . G 5 HOH A 209 669 209 HOH HOH . G 5 HOH A 210 670 210 HOH HOH . G 5 HOH A 211 671 211 HOH HOH . G 5 HOH A 212 672 212 HOH HOH . G 5 HOH A 213 673 213 HOH HOH . G 5 HOH A 214 674 214 HOH HOH . G 5 HOH A 215 675 215 HOH HOH . G 5 HOH A 216 676 216 HOH HOH . G 5 HOH A 217 677 217 HOH HOH . G 5 HOH A 218 678 218 HOH HOH . G 5 HOH A 219 679 219 HOH HOH . G 5 HOH A 220 680 220 HOH HOH . G 5 HOH A 221 681 221 HOH HOH . G 5 HOH A 222 682 222 HOH HOH . G 5 HOH A 223 683 223 HOH HOH . G 5 HOH A 224 684 224 HOH HOH . G 5 HOH A 225 685 225 HOH HOH . G 5 HOH A 226 686 226 HOH HOH . G 5 HOH A 227 687 227 HOH HOH . G 5 HOH A 228 688 228 HOH HOH . G 5 HOH A 229 689 229 HOH HOH . G 5 HOH A 230 690 230 HOH HOH . G 5 HOH A 231 691 231 HOH HOH . G 5 HOH A 232 692 232 HOH HOH . G 5 HOH A 233 693 233 HOH HOH . G 5 HOH A 234 694 234 HOH HOH . G 5 HOH A 235 695 235 HOH HOH . G 5 HOH A 236 696 236 HOH HOH . G 5 HOH A 237 697 237 HOH HOH . G 5 HOH A 238 698 238 HOH HOH . G 5 HOH A 239 699 240 HOH HOH . G 5 HOH A 240 700 241 HOH HOH . G 5 HOH A 241 701 242 HOH HOH . G 5 HOH A 242 702 243 HOH HOH . G 5 HOH A 243 703 244 HOH HOH . G 5 HOH A 244 704 245 HOH HOH . G 5 HOH A 245 705 246 HOH HOH . G 5 HOH A 246 706 247 HOH HOH . G 5 HOH A 247 707 248 HOH HOH . G 5 HOH A 248 708 249 HOH HOH . G 5 HOH A 249 709 250 HOH HOH . G 5 HOH A 250 710 251 HOH HOH . G 5 HOH A 251 711 252 HOH HOH . G 5 HOH A 252 712 253 HOH HOH . G 5 HOH A 253 713 254 HOH HOH . G 5 HOH A 254 714 255 HOH HOH . G 5 HOH A 255 715 256 HOH HOH . G 5 HOH A 256 716 257 HOH HOH . G 5 HOH A 257 717 258 HOH HOH . G 5 HOH A 258 718 259 HOH HOH . G 5 HOH A 259 719 260 HOH HOH . G 5 HOH A 260 720 261 HOH HOH . G 5 HOH A 261 721 262 HOH HOH . G 5 HOH A 262 722 263 HOH HOH . G 5 HOH A 263 723 264 HOH HOH . G 5 HOH A 264 724 265 HOH HOH . G 5 HOH A 265 725 266 HOH HOH . G 5 HOH A 266 726 267 HOH HOH . G 5 HOH A 267 727 268 HOH HOH . G 5 HOH A 268 728 269 HOH HOH . G 5 HOH A 269 729 270 HOH HOH . G 5 HOH A 270 730 271 HOH HOH . G 5 HOH A 271 731 272 HOH HOH . G 5 HOH A 272 732 274 HOH HOH . G 5 HOH A 273 733 275 HOH HOH . G 5 HOH A 274 734 276 HOH HOH . G 5 HOH A 275 735 277 HOH HOH . G 5 HOH A 276 736 278 HOH HOH . G 5 HOH A 277 737 280 HOH HOH . G 5 HOH A 278 738 281 HOH HOH . G 5 HOH A 279 739 282 HOH HOH . G 5 HOH A 280 740 283 HOH HOH . G 5 HOH A 281 741 284 HOH HOH . G 5 HOH A 282 742 285 HOH HOH . G 5 HOH A 283 743 288 HOH HOH . G 5 HOH A 284 744 289 HOH HOH . G 5 HOH A 285 745 290 HOH HOH . G 5 HOH A 286 746 291 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . D 2 18.69 36.678 60.689 1 68.04 ? P PO4 458 A 1 HETATM 2 O O1 PO4 . . . D 2 19.193 38.045 60.337 1 68.2 ? O1 PO4 458 A 1 HETATM 3 O O2 PO4 . . . D 2 17.225 36.585 60.376 1 68.24 ? O2 PO4 458 A 1 HETATM 4 O O3 PO4 . . . D 2 18.91 36.433 62.145 1 67.4 ? O3 PO4 458 A 1 HETATM 5 O O4 PO4 . . . D 2 19.428 35.655 59.889 1 67.88 ? O4 PO4 458 A 1 # _model_server_stats.io_time_ms 115 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 5 #