data_1KQ7 # _model_server_result.job_id wS0eexU2SBJLY2SmhB9Z-w _model_server_result.datetime_utc '2025-03-06 10:04:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1kq7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":468}' # _entry.id 1KQ7 # _exptl.entry_id 1KQ7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 134.087 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description D-MALATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1KQ7 _cell.length_a 104.02 _cell.length_b 220 _cell.length_c 86.23 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KQ7 _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_756 -x+2,y,-z+3/2 -1 0 0 0 1 0 0 0 -1 208.04 0 129.345 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H6 O5' _chem_comp.formula_weight 134.087 _chem_comp.id MLT _chem_comp.mon_nstd_flag . _chem_comp.name D-MALATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(2R)-2-HYDROXYBUTANEDIOIC ACID;2-HYDROXY-SUCCINIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 MLT doub 257 n n C1 O2 MLT sing 258 n n C1 C2 MLT sing 259 n n C2 O3 MLT sing 260 n n C2 C3 MLT sing 261 n n C2 H2 MLT sing 262 n n O3 HO3 MLT sing 263 n n C3 C4 MLT sing 264 n n C3 H31 MLT sing 265 n n C3 H32 MLT sing 266 n n C4 O4 MLT doub 267 n n C4 O5 MLT sing 268 n n O5 HO5 MLT sing 269 n n O2 H6 MLT sing 270 n n # _atom_sites.entry_id 1KQ7 _atom_sites.fract_transf_matrix[1][1] 0.009614 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004545 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011597 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MLT A 1 468 411 MLT MLT . D 3 CIT A 1 469 240 CIT CIT . E 3 CIT B 1 468 241 CIT CIT . F 4 HOH A 1 470 2 HOH HOH . F 4 HOH A 2 471 7 HOH HOH . F 4 HOH A 3 472 8 HOH HOH . F 4 HOH A 4 473 9 HOH HOH . F 4 HOH A 5 474 10 HOH HOH . F 4 HOH A 6 475 13 HOH HOH . F 4 HOH A 7 476 16 HOH HOH . F 4 HOH A 8 477 18 HOH HOH . G 4 HOH B 1 469 1 HOH HOH . G 4 HOH B 2 470 3 HOH HOH . G 4 HOH B 3 471 4 HOH HOH . G 4 HOH B 4 472 5 HOH HOH . G 4 HOH B 5 473 6 HOH HOH . G 4 HOH B 6 474 11 HOH HOH . G 4 HOH B 7 475 12 HOH HOH . G 4 HOH B 8 476 14 HOH HOH . G 4 HOH B 9 477 15 HOH HOH . G 4 HOH B 10 478 17 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MLT . . . C 2 85.568 171.917 40.831 1 42.85 ? C1 MLT 468 A 1 HETATM 2 O O1 MLT . . . C 2 86.11 171.286 41.654 1 46.85 ? O1 MLT 468 A 1 HETATM 3 O O2 MLT . . . C 2 86.057 172.038 39.67 1 42.59 ? O2 MLT 468 A 1 HETATM 4 C C2 MLT . . . C 2 84.268 172.609 41.142 1 44.98 ? C2 MLT 468 A 1 HETATM 5 O O3 MLT . . . C 2 83.283 171.552 41.303 1 40.47 ? O3 MLT 468 A 1 HETATM 6 C C3 MLT . . . C 2 84.267 174.131 41.197 1 39.88 ? C3 MLT 468 A 1 HETATM 7 C C4 MLT . . . C 2 85.129 174.796 42.213 1 39.35 ? C4 MLT 468 A 1 HETATM 8 O O4 MLT . . . C 2 85.945 175.686 41.833 1 42.65 ? O4 MLT 468 A 1 HETATM 9 O O5 MLT . . . C 2 85.009 174.431 43.407 1 45.32 ? O5 MLT 468 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 9 #