data_1KRR # _model_server_result.job_id J56NzgLPBnOgr10zIUHpEA _model_server_result.datetime_utc '2024-10-13 02:25:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1krr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":206}' # _entry.id 1KRR # _exptl.entry_id 1KRR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 809.571 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETYL COENZYME *A' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1KRR _cell.length_a 65.7 _cell.length_b 182.5 _cell.length_c 121.2 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KRR _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C23 H38 N7 O17 P3 S' _chem_comp.formula_weight 809.571 _chem_comp.id ACO _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETYL COENZYME *A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A ACO sing 1 n y N1A C6A ACO doub 2 n y C2A N3A ACO doub 3 n y C2A H2A ACO sing 4 n n N3A C4A ACO sing 5 n y C4A C5A ACO doub 6 n y C4A N9A ACO sing 7 n y C5A C6A ACO sing 8 n y C5A N7A ACO sing 9 n y C6A N6A ACO sing 10 n n N6A H61A ACO sing 11 n n N6A H62A ACO sing 12 n n N7A C8A ACO doub 13 n y C8A N9A ACO sing 14 n y C8A H8A ACO sing 15 n n N9A C1B ACO sing 16 n n C1B C2B ACO sing 17 n n C1B O4B ACO sing 18 n n C1B H1B ACO sing 19 n n C2B O2B ACO sing 20 n n C2B C3B ACO sing 21 n n C2B H2B ACO sing 22 n n O2B HO2A ACO sing 23 n n C3B O3B ACO sing 24 n n C3B C4B ACO sing 25 n n C3B H3B ACO sing 26 n n O3B P3B ACO sing 27 n n P3B O7A ACO doub 28 n n P3B O8A ACO sing 29 n n P3B O9A ACO sing 30 n n O8A HOA8 ACO sing 31 n n O9A HOA9 ACO sing 32 n n C4B O4B ACO sing 33 n n C4B C5B ACO sing 34 n n C4B H4B ACO sing 35 n n C5B O5B ACO sing 36 n n C5B H51A ACO sing 37 n n C5B H52A ACO sing 38 n n O5B P1A ACO sing 39 n n P1A O1A ACO doub 40 n n P1A O2A ACO sing 41 n n P1A O3A ACO sing 42 n n O2A HOA2 ACO sing 43 n n O3A P2A ACO sing 44 n n P2A O4A ACO doub 45 n n P2A O5A ACO sing 46 n n P2A O6A ACO sing 47 n n O5A HOA5 ACO sing 48 n n O6A CCP ACO sing 49 n n CBP CCP ACO sing 50 n n CBP CDP ACO sing 51 n n CBP CEP ACO sing 52 n n CBP CAP ACO sing 53 n n CCP H121 ACO sing 54 n n CCP H122 ACO sing 55 n n CDP H131 ACO sing 56 n n CDP H132 ACO sing 57 n n CDP H133 ACO sing 58 n n CEP H141 ACO sing 59 n n CEP H142 ACO sing 60 n n CEP H143 ACO sing 61 n n CAP OAP ACO sing 62 n n CAP C9P ACO sing 63 n n CAP H10 ACO sing 64 n n OAP HO1 ACO sing 65 n n C9P O9P ACO doub 66 n n C9P N8P ACO sing 67 n n N8P C7P ACO sing 68 n n N8P HN8 ACO sing 69 n n C7P C6P ACO sing 70 n n C7P H71 ACO sing 71 n n C7P H72 ACO sing 72 n n C6P C5P ACO sing 73 n n C6P H61 ACO sing 74 n n C6P H62 ACO sing 75 n n C5P O5P ACO doub 76 n n C5P N4P ACO sing 77 n n N4P C3P ACO sing 78 n n N4P HN4 ACO sing 79 n n C3P C2P ACO sing 80 n n C3P H31 ACO sing 81 n n C3P H32 ACO sing 82 n n C2P S1P ACO sing 83 n n C2P H21 ACO sing 84 n n C2P H22 ACO sing 85 n n S1P C ACO sing 86 n n C O ACO doub 87 n n C CH3 ACO sing 88 n n CH3 HH31 ACO sing 89 n n CH3 HH32 ACO sing 90 n n CH3 HH33 ACO sing 91 n n # _atom_sites.entry_id 1KRR _atom_sites.fract_transf_matrix[1][1] 0.015221 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005479 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008251 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 ACO A 1 204 204 ACO ACA . E 2 ACO B 1 205 204 ACO ACA . F 2 ACO C 1 206 204 ACO ACA . G 3 HOH A 1 2001 2001 HOH HOH . G 3 HOH A 2 2003 2003 HOH HOH . G 3 HOH A 3 2004 2004 HOH HOH . G 3 HOH A 4 2008 2008 HOH HOH . G 3 HOH A 5 2009 2009 HOH HOH . G 3 HOH A 6 2010 2010 HOH HOH . G 3 HOH A 7 2012 2012 HOH HOH . G 3 HOH A 8 2014 2014 HOH HOH . G 3 HOH A 9 2015 2015 HOH HOH . G 3 HOH A 10 2017 2017 HOH HOH . G 3 HOH A 11 2019 2019 HOH HOH . G 3 HOH A 12 2021 2021 HOH HOH . G 3 HOH A 13 2022 2022 HOH HOH . G 3 HOH A 14 2027 2027 HOH HOH . G 3 HOH A 15 2032 2032 HOH HOH . G 3 HOH A 16 2033 2033 HOH HOH . G 3 HOH A 17 2039 2039 HOH HOH . G 3 HOH A 18 2046 2046 HOH HOH . G 3 HOH A 19 2049 2049 HOH HOH . G 3 HOH A 20 2050 2050 HOH HOH . G 3 HOH A 21 2052 2052 HOH HOH . G 3 HOH A 22 2056 2056 HOH HOH . G 3 HOH A 23 2057 2057 HOH HOH . G 3 HOH A 24 2060 2060 HOH HOH . G 3 HOH A 25 2061 2061 HOH HOH . G 3 HOH A 26 2062 2062 HOH HOH . G 3 HOH A 27 2063 2063 HOH HOH . G 3 HOH A 28 2064 2064 HOH HOH . G 3 HOH A 29 2065 2065 HOH HOH . G 3 HOH A 30 2067 2067 HOH HOH . G 3 HOH A 31 2073 2073 HOH HOH . G 3 HOH A 32 2080 2080 HOH HOH . G 3 HOH A 33 2088 2088 HOH HOH . G 3 HOH A 34 2089 2089 HOH HOH . G 3 HOH A 35 2091 2091 HOH HOH . G 3 HOH A 36 2100 2100 HOH HOH . G 3 HOH A 37 2101 2101 HOH HOH . G 3 HOH A 38 2102 2102 HOH HOH . G 3 HOH A 39 2103 2103 HOH HOH . G 3 HOH A 40 2105 2105 HOH HOH . G 3 HOH A 41 2108 2108 HOH HOH . G 3 HOH A 42 2110 2110 HOH HOH . G 3 HOH A 43 2112 2112 HOH HOH . G 3 HOH A 44 2114 2114 HOH HOH . H 3 HOH B 1 2007 2007 HOH HOH . H 3 HOH B 2 2016 2016 HOH HOH . H 3 HOH B 3 2024 2024 HOH HOH . H 3 HOH B 4 2025 2025 HOH HOH . H 3 HOH B 5 2026 2026 HOH HOH . H 3 HOH B 6 2028 2028 HOH HOH . H 3 HOH B 7 2029 2029 HOH HOH . H 3 HOH B 8 2030 2030 HOH HOH . H 3 HOH B 9 2035 2035 HOH HOH . H 3 HOH B 10 2036 2036 HOH HOH . H 3 HOH B 11 2040 2040 HOH HOH . H 3 HOH B 12 2041 2041 HOH HOH . H 3 HOH B 13 2043 2043 HOH HOH . H 3 HOH B 14 2044 2044 HOH HOH . H 3 HOH B 15 2055 2055 HOH HOH . H 3 HOH B 16 2058 2058 HOH HOH . H 3 HOH B 17 2066 2066 HOH HOH . H 3 HOH B 18 2069 2069 HOH HOH . H 3 HOH B 19 2070 2070 HOH HOH . H 3 HOH B 20 2074 2074 HOH HOH . H 3 HOH B 21 2077 2077 HOH HOH . H 3 HOH B 22 2079 2079 HOH HOH . H 3 HOH B 23 2081 2081 HOH HOH . H 3 HOH B 24 2084 2084 HOH HOH . H 3 HOH B 25 2085 2085 HOH HOH . H 3 HOH B 26 2087 2087 HOH HOH . H 3 HOH B 27 2090 2090 HOH HOH . H 3 HOH B 28 2092 2092 HOH HOH . H 3 HOH B 29 2095 2095 HOH HOH . H 3 HOH B 30 2096 2096 HOH HOH . H 3 HOH B 31 2099 2099 HOH HOH . H 3 HOH B 32 2106 2106 HOH HOH . H 3 HOH B 33 2111 2111 HOH HOH . H 3 HOH B 34 2115 2115 HOH HOH . I 3 HOH C 1 2002 2002 HOH HOH . I 3 HOH C 2 2005 2005 HOH HOH . I 3 HOH C 3 2006 2006 HOH HOH . I 3 HOH C 4 2011 2011 HOH HOH . I 3 HOH C 5 2013 2013 HOH HOH . I 3 HOH C 6 2018 2018 HOH HOH . I 3 HOH C 7 2020 2020 HOH HOH . I 3 HOH C 8 2023 2023 HOH HOH . I 3 HOH C 9 2031 2031 HOH HOH . I 3 HOH C 10 2034 2034 HOH HOH . I 3 HOH C 11 2037 2037 HOH HOH . I 3 HOH C 12 2038 2038 HOH HOH . I 3 HOH C 13 2042 2042 HOH HOH . I 3 HOH C 14 2045 2045 HOH HOH . I 3 HOH C 15 2047 2047 HOH HOH . I 3 HOH C 16 2048 2048 HOH HOH . I 3 HOH C 17 2051 2051 HOH HOH . I 3 HOH C 18 2053 2053 HOH HOH . I 3 HOH C 19 2054 2054 HOH HOH . I 3 HOH C 20 2059 2059 HOH HOH . I 3 HOH C 21 2068 2068 HOH HOH . I 3 HOH C 22 2071 2071 HOH HOH . I 3 HOH C 23 2072 2072 HOH HOH . I 3 HOH C 24 2075 2075 HOH HOH . I 3 HOH C 25 2076 2076 HOH HOH . I 3 HOH C 26 2082 2082 HOH HOH . I 3 HOH C 27 2083 2083 HOH HOH . I 3 HOH C 28 2086 2086 HOH HOH . I 3 HOH C 29 2093 2093 HOH HOH . I 3 HOH C 30 2094 2094 HOH HOH . I 3 HOH C 31 2097 2097 HOH HOH . I 3 HOH C 32 2098 2098 HOH HOH . I 3 HOH C 33 2104 2104 HOH HOH . I 3 HOH C 34 2107 2107 HOH HOH . I 3 HOH C 35 2113 2113 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A ACO . . . F 2 -24.559 -14.091 -17.167 1 21.93 ? N1A ACO 206 C 1 HETATM 2 C C2A ACO . . . F 2 -23.596 -13.524 -17.971 1 22.53 ? C2A ACO 206 C 1 HETATM 3 N N3A ACO . . . F 2 -23.774 -12.934 -19.113 1 22.97 ? N3A ACO 206 C 1 HETATM 4 C C4A ACO . . . F 2 -25.091 -12.921 -19.46 1 26.2 ? C4A ACO 206 C 1 HETATM 5 C C5A ACO . . . F 2 -26.177 -13.437 -18.767 1 24.65 ? C5A ACO 206 C 1 HETATM 6 C C6A ACO . . . F 2 -25.882 -14.06 -17.555 1 22.41 ? C6A ACO 206 C 1 HETATM 7 N N6A ACO . . . F 2 -26.793 -14.615 -16.764 1 19.14 ? N6A ACO 206 C 1 HETATM 8 N N7A ACO . . . F 2 -27.372 -13.225 -19.435 1 25.68 ? N7A ACO 206 C 1 HETATM 9 C C8A ACO . . . F 2 -26.972 -12.57 -20.512 1 28.67 ? C8A ACO 206 C 1 HETATM 10 N N9A ACO . . . F 2 -25.624 -12.396 -20.581 1 30.55 ? N9A ACO 206 C 1 HETATM 11 C C1B ACO . . . F 2 -24.847 -11.778 -21.62 1 34.94 ? C1B ACO 206 C 1 HETATM 12 C C2B ACO . . . F 2 -25.192 -12.467 -22.911 1 38.35 ? C2B ACO 206 C 1 HETATM 13 O O2B ACO . . . F 2 -24.459 -13.697 -23.059 1 38.42 ? O2B ACO 206 C 1 HETATM 14 C C3B ACO . . . F 2 -24.838 -11.449 -23.974 1 40.76 ? C3B ACO 206 C 1 HETATM 15 O O3B ACO . . . F 2 -23.542 -11.696 -24.492 1 46.75 ? O3B ACO 206 C 1 HETATM 16 P P3B ACO . . . F 2 -22.96 -10.756 -25.634 1 54.08 ? P3B ACO 206 C 1 HETATM 17 O O7A ACO . . . F 2 -21.517 -11.002 -25.757 1 51.05 ? O7A ACO 206 C 1 HETATM 18 O O8A ACO . . . F 2 -23.374 -9.357 -25.345 1 51.44 ? O8A ACO 206 C 1 HETATM 19 O O9A ACO . . . F 2 -23.593 -11.113 -26.926 1 52.39 ? O9A ACO 206 C 1 HETATM 20 C C4B ACO . . . F 2 -25.201 -10.177 -23.24 1 38.17 ? C4B ACO 206 C 1 HETATM 21 O O4B ACO . . . F 2 -25.22 -10.457 -21.813 1 35.22 ? O4B ACO 206 C 1 HETATM 22 C C5B ACO . . . F 2 -26.566 -9.594 -23.539 1 36.85 ? C5B ACO 206 C 1 HETATM 23 O O5B ACO . . . F 2 -27.626 -10.312 -22.847 1 38.29 ? O5B ACO 206 C 1 HETATM 24 P P1A ACO . . . F 2 -29.11 -10.286 -23.455 1 38.22 ? P1A ACO 206 C 1 HETATM 25 O O1A ACO . . . F 2 -29.662 -11.655 -23.558 1 37.28 ? O1A ACO 206 C 1 HETATM 26 O O2A ACO . . . F 2 -29.111 -9.625 -24.783 1 40.86 ? O2A ACO 206 C 1 HETATM 27 O O3A ACO . . . F 2 -29.862 -9.359 -22.437 1 36.78 ? O3A ACO 206 C 1 HETATM 28 P P2A ACO . . . F 2 -30.965 -9.697 -21.236 1 36.56 ? P2A ACO 206 C 1 HETATM 29 O O4A ACO . . . F 2 -32.249 -10.207 -21.794 1 37.08 ? O4A ACO 206 C 1 HETATM 30 O O5A ACO . . . F 2 -31.149 -8.507 -20.36 1 41.07 ? O5A ACO 206 C 1 HETATM 31 O O6A ACO . . . F 2 -30.192 -10.855 -20.44 1 39.42 ? O6A ACO 206 C 1 HETATM 32 C CBP ACO . . . F 2 -31.176 -12.591 -18.84 1 33.82 ? CBP ACO 206 C 1 HETATM 33 C CCP ACO . . . F 2 -31.035 -12.083 -20.291 1 36.78 ? CCP ACO 206 C 1 HETATM 34 C CDP ACO . . . F 2 -30.257 -11.807 -17.906 1 31.53 ? CDP ACO 206 C 1 HETATM 35 C CEP ACO . . . F 2 -32.615 -12.491 -18.316 1 34.28 ? CEP ACO 206 C 1 HETATM 36 C CAP ACO . . . F 2 -30.754 -14.077 -18.897 1 32.15 ? CAP ACO 206 C 1 HETATM 37 O OAP ACO . . . F 2 -29.406 -14.197 -19.372 1 34.49 ? OAP ACO 206 C 1 HETATM 38 C C9P ACO . . . F 2 -30.716 -14.798 -17.549 1 31.68 ? C9P ACO 206 C 1 HETATM 39 O O9P ACO . . . F 2 -29.675 -14.843 -16.864 1 28.93 ? O9P ACO 206 C 1 HETATM 40 N N8P ACO . . . F 2 -31.862 -15.375 -17.209 1 30.3 ? N8P ACO 206 C 1 HETATM 41 C C7P ACO . . . F 2 -32.044 -16.126 -15.966 1 30.5 ? C7P ACO 206 C 1 HETATM 42 C C6P ACO . . . F 2 -33.035 -17.299 -16.069 1 31.67 ? C6P ACO 206 C 1 HETATM 43 C C5P ACO . . . F 2 -33.34 -17.871 -14.674 1 33.15 ? C5P ACO 206 C 1 HETATM 44 O O5P ACO . . . F 2 -32.424 -18.291 -13.952 1 32.84 ? O5P ACO 206 C 1 HETATM 45 N N4P ACO . . . F 2 -34.631 -17.872 -14.325 1 34.31 ? N4P ACO 206 C 1 HETATM 46 C C3P ACO . . . F 2 -35.08 -18.329 -12.994 1 35.63 ? C3P ACO 206 C 1 HETATM 47 C C2P ACO . . . F 2 -36.502 -18.907 -13 1 36.19 ? C2P ACO 206 C 1 HETATM 48 S S1P ACO . . . F 2 -37.85 -17.677 -12.598 1 40.35 ? S1P ACO 206 C 1 HETATM 49 C C ACO . . . F 2 -38.087 -17.775 -10.806 1 41.58 ? C ACO 206 C 1 HETATM 50 O O ACO . . . F 2 -38.165 -18.947 -10.226 1 39.79 ? O ACO 206 C 1 HETATM 51 C CH3 ACO . . . F 2 -38.195 -16.461 -10 1 39.19 ? CH3 ACO 206 C 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 51 #