data_1KRV
#
_model_server_result.job_id            u6vRX1Kf0yrQWEQzasldVA 
_model_server_result.datetime_utc      '2024-12-21 11:36:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1krv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":209}' 
#
_entry.id    1KRV 
#
_exptl.entry_id    1KRV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              767.534 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'COENZYME A' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1KRV 
_cell.length_a            66.3 
_cell.length_b            183.8 
_cell.length_c            121.5 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1KRV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 G N N 
? 3 I N N 
#
_chem_comp.formula           'C21 H36 N7 O16 P3 S' 
_chem_comp.formula_weight    767.534 
_chem_comp.id                COA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'COENZYME A' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1A C2A COA sing 107 n y 
N1A C6A COA doub 108 n y 
C2A N3A COA doub 109 n y 
C2A H2A COA sing 110 n n 
N3A C4A COA sing 111 n y 
C4A C5A COA doub 112 n y 
C4A N9A COA sing 113 n y 
C5A C6A COA sing 114 n y 
C5A N7A COA sing 115 n y 
C6A N6A COA sing 116 n n 
N6A H61A COA sing 117 n n 
N6A H62A COA sing 118 n n 
N7A C8A COA doub 119 n y 
C8A N9A COA sing 120 n y 
C8A H8A COA sing 121 n n 
N9A C1B COA sing 122 n n 
C1B C2B COA sing 123 n n 
C1B O4B COA sing 124 n n 
C1B H1B COA sing 125 n n 
C2B O2B COA sing 126 n n 
C2B C3B COA sing 127 n n 
C2B H2B COA sing 128 n n 
O2B HO2A COA sing 129 n n 
C3B O3B COA sing 130 n n 
C3B C4B COA sing 131 n n 
C3B H3B COA sing 132 n n 
O3B P3B COA sing 133 n n 
P3B O7A COA doub 134 n n 
P3B O8A COA sing 135 n n 
P3B O9A COA sing 136 n n 
O8A HOA8 COA sing 137 n n 
O9A HOA9 COA sing 138 n n 
C4B O4B COA sing 139 n n 
C4B C5B COA sing 140 n n 
C4B H4B COA sing 141 n n 
C5B O5B COA sing 142 n n 
C5B H51A COA sing 143 n n 
C5B H52A COA sing 144 n n 
O5B P1A COA sing 145 n n 
P1A O1A COA doub 146 n n 
P1A O2A COA sing 147 n n 
P1A O3A COA sing 148 n n 
O2A HOA2 COA sing 149 n n 
O3A P2A COA sing 150 n n 
P2A O4A COA doub 151 n n 
P2A O5A COA sing 152 n n 
P2A O6A COA sing 153 n n 
O5A HOA5 COA sing 154 n n 
O6A CCP COA sing 155 n n 
CBP CCP COA sing 156 n n 
CBP CDP COA sing 157 n n 
CBP CEP COA sing 158 n n 
CBP CAP COA sing 159 n n 
CCP H121 COA sing 160 n n 
CCP H122 COA sing 161 n n 
CDP H131 COA sing 162 n n 
CDP H132 COA sing 163 n n 
CDP H133 COA sing 164 n n 
CEP H141 COA sing 165 n n 
CEP H142 COA sing 166 n n 
CEP H143 COA sing 167 n n 
CAP OAP COA sing 168 n n 
CAP C9P COA sing 169 n n 
CAP H10 COA sing 170 n n 
OAP HO1 COA sing 171 n n 
C9P O9P COA doub 172 n n 
C9P N8P COA sing 173 n n 
N8P C7P COA sing 174 n n 
N8P HN8 COA sing 175 n n 
C7P C6P COA sing 176 n n 
C7P H71 COA sing 177 n n 
C7P H72 COA sing 178 n n 
C6P C5P COA sing 179 n n 
C6P H61 COA sing 180 n n 
C6P H62 COA sing 181 n n 
C5P O5P COA doub 182 n n 
C5P N4P COA sing 183 n n 
N4P C3P COA sing 184 n n 
N4P HN4 COA sing 185 n n 
C3P C2P COA sing 186 n n 
C3P H31 COA sing 187 n n 
C3P H32 COA sing 188 n n 
C2P S1P COA sing 189 n n 
C2P H21 COA sing 190 n n 
C2P H22 COA sing 191 n n 
S1P HS1 COA sing 192 n n 
#
_atom_sites.entry_id                     1KRV 
_atom_sites.fract_transf_matrix[1][1]    0.015083 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005441 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00823 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 147 A 1 206 204 147 PNP . 
E 3 COA A 1 207 205 COA COA . 
F 2 147 B 1 204 204 147 PNP . 
G 3 COA B 1 208 205 COA COA . 
H 2 147 C 1 205 204 147 PNP . 
I 3 COA C 1 209 205 COA COA . 
J 4 HOH A 1 2001 2001 HOH HOH . 
J 4 HOH A 2 2004 2004 HOH HOH . 
J 4 HOH A 3 2005 2005 HOH HOH . 
J 4 HOH A 4 2010 2010 HOH HOH . 
J 4 HOH A 5 2012 2012 HOH HOH . 
J 4 HOH A 6 2015 2015 HOH HOH . 
J 4 HOH A 7 2017 2017 HOH HOH . 
J 4 HOH A 8 2021 2021 HOH HOH . 
J 4 HOH A 9 2022 2022 HOH HOH . 
J 4 HOH A 10 2023 2023 HOH HOH . 
J 4 HOH A 11 2031 2031 HOH HOH . 
J 4 HOH A 12 2034 2034 HOH HOH . 
J 4 HOH A 13 2035 2035 HOH HOH . 
J 4 HOH A 14 2036 2036 HOH HOH . 
J 4 HOH A 15 2037 2037 HOH HOH . 
J 4 HOH A 16 2041 2041 HOH HOH . 
J 4 HOH A 17 2044 2044 HOH HOH . 
J 4 HOH A 18 2045 2045 HOH HOH . 
J 4 HOH A 19 2047 2047 HOH HOH . 
J 4 HOH A 20 2048 2048 HOH HOH . 
J 4 HOH A 21 2056 2056 HOH HOH . 
J 4 HOH A 22 2057 2057 HOH HOH . 
J 4 HOH A 23 2058 2058 HOH HOH . 
J 4 HOH A 24 2060 2060 HOH HOH . 
J 4 HOH A 25 2067 2067 HOH HOH . 
K 4 HOH B 1 2003 2003 HOH HOH . 
K 4 HOH B 2 2006 2006 HOH HOH . 
K 4 HOH B 3 2009 2009 HOH HOH . 
K 4 HOH B 4 2011 2011 HOH HOH . 
K 4 HOH B 5 2016 2016 HOH HOH . 
K 4 HOH B 6 2025 2025 HOH HOH . 
K 4 HOH B 7 2030 2030 HOH HOH . 
K 4 HOH B 8 2032 2032 HOH HOH . 
K 4 HOH B 9 2033 2033 HOH HOH . 
K 4 HOH B 10 2039 2039 HOH HOH . 
K 4 HOH B 11 2040 2040 HOH HOH . 
K 4 HOH B 12 2042 2042 HOH HOH . 
K 4 HOH B 13 2043 2043 HOH HOH . 
K 4 HOH B 14 2046 2046 HOH HOH . 
K 4 HOH B 15 2049 2049 HOH HOH . 
K 4 HOH B 16 2051 2051 HOH HOH . 
K 4 HOH B 17 2054 2054 HOH HOH . 
K 4 HOH B 18 2055 2055 HOH HOH . 
K 4 HOH B 19 2059 2059 HOH HOH . 
K 4 HOH B 20 2063 2063 HOH HOH . 
K 4 HOH B 21 2064 2064 HOH HOH . 
K 4 HOH B 22 2066 2066 HOH HOH . 
K 4 HOH B 23 2069 2069 HOH HOH . 
K 4 HOH B 24 2071 2071 HOH HOH . 
L 4 HOH C 1 2002 2002 HOH HOH . 
L 4 HOH C 2 2007 2007 HOH HOH . 
L 4 HOH C 3 2008 2008 HOH HOH . 
L 4 HOH C 4 2013 2013 HOH HOH . 
L 4 HOH C 5 2014 2014 HOH HOH . 
L 4 HOH C 6 2018 2018 HOH HOH . 
L 4 HOH C 7 2019 2019 HOH HOH . 
L 4 HOH C 8 2020 2020 HOH HOH . 
L 4 HOH C 9 2024 2024 HOH HOH . 
L 4 HOH C 10 2026 2026 HOH HOH . 
L 4 HOH C 11 2027 2027 HOH HOH . 
L 4 HOH C 12 2028 2028 HOH HOH . 
L 4 HOH C 13 2029 2029 HOH HOH . 
L 4 HOH C 14 2038 2038 HOH HOH . 
L 4 HOH C 15 2050 2050 HOH HOH . 
L 4 HOH C 16 2053 2053 HOH HOH . 
L 4 HOH C 17 2061 2061 HOH HOH . 
L 4 HOH C 18 2062 2062 HOH HOH . 
L 4 HOH C 19 2065 2065 HOH HOH . 
L 4 HOH C 20 2068 2068 HOH HOH . 
L 4 HOH C 21 2070 2070 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1A COA . . . I 3 -24.678 -13.949 -16.844 1 28.17 ? N1A COA 209 C 1 
HETATM 2 C C2A COA . . . I 3 -23.743 -13.416 -17.679 1 28.84 ? C2A COA 209 C 1 
HETATM 3 N N3A COA . . . I 3 -23.919 -12.986 -18.956 1 29.19 ? N3A COA 209 C 1 
HETATM 4 C C4A COA . . . I 3 -25.226 -13.145 -19.359 1 29.87 ? C4A COA 209 C 1 
HETATM 5 C C5A COA . . . I 3 -26.276 -13.678 -18.603 1 27.77 ? C5A COA 209 C 1 
HETATM 6 C C6A COA . . . I 3 -25.987 -14.095 -17.285 1 26.68 ? C6A COA 209 C 1 
HETATM 7 N N6A COA . . . I 3 -26.899 -14.623 -16.471 1 25.92 ? N6A COA 209 C 1 
HETATM 8 N N7A COA . . . I 3 -27.432 -13.687 -19.308 1 28.41 ? N7A COA 209 C 1 
HETATM 9 C C8A COA . . . I 3 -27.103 -13.176 -20.476 1 29.31 ? C8A COA 209 C 1 
HETATM 10 N N9A COA . . . I 3 -25.788 -12.831 -20.592 1 32.54 ? N9A COA 209 C 1 
HETATM 11 C C1B COA . . . I 3 -25.09 -12.25 -21.761 1 36.92 ? C1B COA 209 C 1 
HETATM 12 C C2B COA . . . I 3 -25.628 -12.852 -23.064 1 40.44 ? C2B COA 209 C 1 
HETATM 13 O O2B COA . . . I 3 -25.003 -14.118 -23.388 1 39.64 ? O2B COA 209 C 1 
HETATM 14 C C3B COA . . . I 3 -25.359 -11.817 -24.109 1 42.87 ? C3B COA 209 C 1 
HETATM 15 O O3B COA . . . I 3 -24.096 -12.097 -24.763 1 48.62 ? O3B COA 209 C 1 
HETATM 16 P P3B COA . . . I 3 -23.519 -11.196 -25.943 1 55.45 ? P3B COA 209 C 1 
HETATM 17 O O7A COA . . . I 3 -22.219 -11.771 -26.378 1 52.1 ? O7A COA 209 C 1 
HETATM 18 O O8A COA . . . I 3 -23.301 -9.786 -25.468 1 52.51 ? O8A COA 209 C 1 
HETATM 19 O O9A COA . . . I 3 -24.479 -11.204 -27.103 1 51.39 ? O9A COA 209 C 1 
HETATM 20 C C4B COA . . . I 3 -25.443 -10.503 -23.278 1 39.74 ? C4B COA 209 C 1 
HETATM 21 O O4B COA . . . I 3 -25.285 -10.868 -21.88 1 35.72 ? O4B COA 209 C 1 
HETATM 22 C C5B COA . . . I 3 -26.758 -9.692 -23.418 1 38.36 ? C5B COA 209 C 1 
HETATM 23 O O5B COA . . . I 3 -27.935 -10.371 -22.856 1 38.29 ? O5B COA 209 C 1 
HETATM 24 P P1A COA . . . I 3 -29.289 -10.573 -23.755 1 38.82 ? P1A COA 209 C 1 
HETATM 25 O O1A COA . . . I 3 -29.201 -11.827 -24.552 1 40.23 ? O1A COA 209 C 1 
HETATM 26 O O2A COA . . . I 3 -29.477 -9.425 -24.675 1 40.7 ? O2A COA 209 C 1 
HETATM 27 O O3A COA . . . I 3 -30.452 -10.653 -22.689 1 36.24 ? O3A COA 209 C 1 
HETATM 28 P P2A COA . . . I 3 -31.16 -9.601 -21.597 1 34.05 ? P2A COA 209 C 1 
HETATM 29 O O4A COA . . . I 3 -32.616 -9.45 -21.871 1 30.83 ? O4A COA 209 C 1 
HETATM 30 O O5A COA . . . I 3 -30.524 -8.257 -21.743 1 36.37 ? O5A COA 209 C 1 
HETATM 31 O O6A COA . . . I 3 -30.754 -10.447 -20.274 1 35.18 ? O6A COA 209 C 1 
HETATM 32 C CBP COA . . . I 3 -31.709 -12.318 -18.675 1 30.64 ? CBP COA 209 C 1 
HETATM 33 C CCP COA . . . I 3 -31.669 -11.64 -20.097 1 31.67 ? CCP COA 209 C 1 
HETATM 34 C CDP COA . . . I 3 -30.788 -11.575 -17.687 1 30.47 ? CDP COA 209 C 1 
HETATM 35 C CEP COA . . . I 3 -33.135 -12.241 -18.123 1 33.23 ? CEP COA 209 C 1 
HETATM 36 C CAP COA . . . I 3 -31.263 -13.829 -18.815 1 30.31 ? CAP COA 209 C 1 
HETATM 37 O OAP COA . . . I 3 -29.955 -13.864 -19.338 1 31.27 ? OAP COA 209 C 1 
HETATM 38 C C9P COA . . . I 3 -31.211 -14.685 -17.472 1 29.65 ? C9P COA 209 C 1 
HETATM 39 O O9P COA . . . I 3 -30.133 -15.189 -17.088 1 27.29 ? O9P COA 209 C 1 
HETATM 40 N N8P COA . . . I 3 -32.307 -14.866 -16.774 1 31.26 ? N8P COA 209 C 1 
HETATM 41 C C7P COA . . . I 3 -32.382 -15.657 -15.514 1 32.9 ? C7P COA 209 C 1 
HETATM 42 C C6P COA . . . I 3 -33.22 -16.922 -15.793 1 33.94 ? C6P COA 209 C 1 
HETATM 43 C C5P COA . . . I 3 -33.402 -17.815 -14.573 1 34.68 ? C5P COA 209 C 1 
HETATM 44 O O5P COA . . . I 3 -32.514 -17.959 -13.722 1 36.12 ? O5P COA 209 C 1 
HETATM 45 N N4P COA . . . I 3 -34.583 -18.408 -14.52 1 35.02 ? N4P COA 209 C 1 
HETATM 46 C C3P COA . . . I 3 -34.966 -19.317 -13.428 1 35.78 ? C3P COA 209 C 1 
HETATM 47 C C2P COA . . . I 3 -36.477 -19.493 -13.373 1 35.31 ? C2P COA 209 C 1 
HETATM 48 S S1P COA . . . I 3 -37.347 -17.967 -12.773 1 39 ? S1P COA 209 C 1 
#
_model_server_stats.io_time_ms              54 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           520 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           48 
#