data_1KSF # _model_server_result.job_id ePr1Be3uffRne0qokCnniA _model_server_result.datetime_utc '2025-03-01 05:41:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ksf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":783}' # _entry.id 1KSF # _exptl.entry_id 1KSF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1KSF _cell.length_a 124.107 _cell.length_b 124.107 _cell.length_c 97.042 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KSF _symmetry.cell_setting hexagonal _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 520 X ASP 520 1_555 C MG MG . X MG 783 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? metalc ? metalc2 A OD1 ASP 520 X ASP 520 1_555 C MG MG . X MG 783 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? metalc ? metalc3 A OG SER 522 X SER 522 1_555 C MG MG . X MG 783 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc4 A OE1 GLU 565 X GLU 565 1_555 C MG MG . X MG 783 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc5 A OE2 GLU 639 X GLU 639 6_544 C MG MG . X MG 783 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1KSF _atom_sites.fract_transf_matrix[1][1] 0.008058 _atom_sites.fract_transf_matrix[1][2] 0.004652 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009304 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010305 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG X 1 782 782 MG MG . C 2 MG X 1 783 783 MG MG . D 3 MET X 1 784 1 MET MET . E 4 PGE X 1 785 2 PGE PGE . F 4 PGE X 1 786 3 PGE PGE . G 5 ADP X 1 780 780 ADP ADP . H 5 ADP X 1 781 781 ADP ADP . I 6 IPA X 1 791 791 IPA IOH . J 6 IPA X 1 792 792 IPA IOH . K 6 IPA X 1 794 794 IPA IOH . L 6 IPA X 1 795 795 IPA IOH . M 6 IPA X 1 796 796 IPA IOH . N 7 HOH X 1 800 800 HOH HOH . N 7 HOH X 2 801 801 HOH HOH . N 7 HOH X 3 802 802 HOH HOH . N 7 HOH X 4 803 803 HOH HOH . N 7 HOH X 5 804 804 HOH HOH . N 7 HOH X 6 805 805 HOH HOH . N 7 HOH X 7 806 806 HOH HOH . N 7 HOH X 8 807 807 HOH HOH . N 7 HOH X 9 808 808 HOH HOH . N 7 HOH X 10 809 809 HOH HOH . N 7 HOH X 11 810 810 HOH HOH . N 7 HOH X 12 811 811 HOH HOH . N 7 HOH X 13 812 812 HOH HOH . N 7 HOH X 14 813 813 HOH HOH . N 7 HOH X 15 814 814 HOH HOH . N 7 HOH X 16 815 815 HOH HOH . N 7 HOH X 17 816 816 HOH HOH . N 7 HOH X 18 817 817 HOH HOH . N 7 HOH X 19 818 818 HOH HOH . N 7 HOH X 20 820 820 HOH HOH . N 7 HOH X 21 821 821 HOH HOH . N 7 HOH X 22 822 822 HOH HOH . N 7 HOH X 23 823 823 HOH HOH . N 7 HOH X 24 824 824 HOH HOH . N 7 HOH X 25 825 825 HOH HOH . N 7 HOH X 26 826 826 HOH HOH . N 7 HOH X 27 827 827 HOH HOH . N 7 HOH X 28 828 828 HOH HOH . N 7 HOH X 29 829 829 HOH HOH . N 7 HOH X 30 830 830 HOH HOH . N 7 HOH X 31 831 831 HOH HOH . N 7 HOH X 32 832 832 HOH HOH . N 7 HOH X 33 833 833 HOH HOH . N 7 HOH X 34 834 834 HOH HOH . N 7 HOH X 35 835 835 HOH HOH . N 7 HOH X 36 836 836 HOH HOH . N 7 HOH X 37 837 837 HOH HOH . N 7 HOH X 38 838 838 HOH HOH . N 7 HOH X 39 839 839 HOH HOH . N 7 HOH X 40 840 840 HOH HOH . N 7 HOH X 41 841 841 HOH HOH . N 7 HOH X 42 842 842 HOH HOH . N 7 HOH X 43 843 843 HOH HOH . N 7 HOH X 44 844 844 HOH HOH . N 7 HOH X 45 845 845 HOH HOH . N 7 HOH X 46 846 846 HOH HOH . N 7 HOH X 47 847 847 HOH HOH . N 7 HOH X 48 848 848 HOH HOH . N 7 HOH X 49 849 849 HOH HOH . N 7 HOH X 50 850 850 HOH HOH . N 7 HOH X 51 851 851 HOH HOH . N 7 HOH X 52 852 852 HOH HOH . N 7 HOH X 53 853 853 HOH HOH . N 7 HOH X 54 854 854 HOH HOH . N 7 HOH X 55 855 855 HOH HOH . N 7 HOH X 56 856 856 HOH HOH . N 7 HOH X 57 857 857 HOH HOH . N 7 HOH X 58 858 858 HOH HOH . N 7 HOH X 59 859 859 HOH HOH . N 7 HOH X 60 860 860 HOH HOH . N 7 HOH X 61 861 861 HOH HOH . N 7 HOH X 62 862 862 HOH HOH . N 7 HOH X 63 863 863 HOH HOH . N 7 HOH X 64 864 864 HOH HOH . N 7 HOH X 65 865 865 HOH HOH . N 7 HOH X 66 866 866 HOH HOH . N 7 HOH X 67 867 867 HOH HOH . N 7 HOH X 68 868 868 HOH HOH . N 7 HOH X 69 869 869 HOH HOH . N 7 HOH X 70 870 870 HOH HOH . N 7 HOH X 71 871 871 HOH HOH . N 7 HOH X 72 872 872 HOH HOH . N 7 HOH X 73 873 873 HOH HOH . N 7 HOH X 74 874 874 HOH HOH . N 7 HOH X 75 875 875 HOH HOH . N 7 HOH X 76 876 876 HOH HOH . N 7 HOH X 77 877 877 HOH HOH . N 7 HOH X 78 878 878 HOH HOH . N 7 HOH X 79 879 879 HOH HOH . N 7 HOH X 80 880 880 HOH HOH . N 7 HOH X 81 881 881 HOH HOH . N 7 HOH X 82 882 882 HOH HOH . N 7 HOH X 83 883 883 HOH HOH . N 7 HOH X 84 884 884 HOH HOH . N 7 HOH X 85 885 885 HOH HOH . N 7 HOH X 86 886 886 HOH HOH . N 7 HOH X 87 887 887 HOH HOH . N 7 HOH X 88 888 888 HOH HOH . N 7 HOH X 89 889 889 HOH HOH . N 7 HOH X 90 890 890 HOH HOH . N 7 HOH X 91 891 891 HOH HOH . N 7 HOH X 92 892 892 HOH HOH . N 7 HOH X 93 893 893 HOH HOH . N 7 HOH X 94 894 894 HOH HOH . N 7 HOH X 95 895 895 HOH HOH . N 7 HOH X 96 896 896 HOH HOH . N 7 HOH X 97 897 897 HOH HOH . N 7 HOH X 98 898 898 HOH HOH . N 7 HOH X 99 899 899 HOH HOH . N 7 HOH X 100 900 900 HOH HOH . N 7 HOH X 101 901 901 HOH HOH . N 7 HOH X 102 902 902 HOH HOH . N 7 HOH X 103 903 903 HOH HOH . N 7 HOH X 104 904 904 HOH HOH . N 7 HOH X 105 905 905 HOH HOH . N 7 HOH X 106 906 906 HOH HOH . N 7 HOH X 107 907 907 HOH HOH . N 7 HOH X 108 908 908 HOH HOH . N 7 HOH X 109 909 909 HOH HOH . N 7 HOH X 110 910 910 HOH HOH . N 7 HOH X 111 911 911 HOH HOH . N 7 HOH X 112 915 915 HOH HOH . N 7 HOH X 113 917 917 HOH HOH . N 7 HOH X 114 918 918 HOH HOH . N 7 HOH X 115 919 919 HOH HOH . N 7 HOH X 116 921 921 HOH HOH . N 7 HOH X 117 922 922 HOH HOH . N 7 HOH X 118 924 924 HOH HOH . N 7 HOH X 119 925 925 HOH HOH . N 7 HOH X 120 926 926 HOH HOH . N 7 HOH X 121 927 927 HOH HOH . N 7 HOH X 122 928 928 HOH HOH . N 7 HOH X 123 929 929 HOH HOH . N 7 HOH X 124 930 930 HOH HOH . N 7 HOH X 125 931 931 HOH HOH . N 7 HOH X 126 932 932 HOH HOH . N 7 HOH X 127 933 933 HOH HOH . N 7 HOH X 128 934 934 HOH HOH . N 7 HOH X 129 935 935 HOH HOH . N 7 HOH X 130 937 937 HOH HOH . N 7 HOH X 131 938 938 HOH HOH . N 7 HOH X 132 939 939 HOH HOH . N 7 HOH X 133 940 940 HOH HOH . N 7 HOH X 134 941 941 HOH HOH . N 7 HOH X 135 942 942 HOH HOH . N 7 HOH X 136 943 943 HOH HOH . N 7 HOH X 137 944 944 HOH HOH . N 7 HOH X 138 945 945 HOH HOH . N 7 HOH X 139 947 947 HOH HOH . N 7 HOH X 140 948 948 HOH HOH . N 7 HOH X 141 955 955 HOH HOH . N 7 HOH X 142 958 958 HOH HOH . N 7 HOH X 143 959 959 HOH HOH . N 7 HOH X 144 961 961 HOH HOH . N 7 HOH X 145 962 962 HOH HOH . N 7 HOH X 146 963 963 HOH HOH . N 7 HOH X 147 964 964 HOH HOH . N 7 HOH X 148 965 965 HOH HOH . N 7 HOH X 149 966 966 HOH HOH . N 7 HOH X 150 967 967 HOH HOH . N 7 HOH X 151 968 968 HOH HOH . N 7 HOH X 152 969 969 HOH HOH . N 7 HOH X 153 970 970 HOH HOH . N 7 HOH X 154 972 972 HOH HOH . N 7 HOH X 155 973 973 HOH HOH . N 7 HOH X 156 975 975 HOH HOH . N 7 HOH X 157 976 976 HOH HOH . N 7 HOH X 158 977 977 HOH HOH . N 7 HOH X 159 978 978 HOH HOH . N 7 HOH X 160 979 979 HOH HOH . N 7 HOH X 161 980 980 HOH HOH . N 7 HOH X 162 981 981 HOH HOH . N 7 HOH X 163 982 982 HOH HOH . N 7 HOH X 164 986 986 HOH HOH . N 7 HOH X 165 987 987 HOH HOH . N 7 HOH X 166 988 988 HOH HOH . N 7 HOH X 167 989 989 HOH HOH . N 7 HOH X 168 990 990 HOH HOH . N 7 HOH X 169 991 991 HOH HOH . N 7 HOH X 170 992 992 HOH HOH . N 7 HOH X 171 993 993 HOH HOH . N 7 HOH X 172 994 994 HOH HOH . N 7 HOH X 173 997 997 HOH HOH . N 7 HOH X 174 998 998 HOH HOH . N 7 HOH X 175 999 999 HOH HOH . N 7 HOH X 176 1000 1000 HOH HOH . N 7 HOH X 177 1001 1001 HOH HOH . N 7 HOH X 178 1004 1004 HOH HOH . N 7 HOH X 179 1005 1005 HOH HOH . N 7 HOH X 180 1006 1006 HOH HOH . N 7 HOH X 181 1007 1007 HOH HOH . N 7 HOH X 182 1010 1010 HOH HOH . N 7 HOH X 183 1013 1013 HOH HOH . N 7 HOH X 184 1018 1018 HOH HOH . N 7 HOH X 185 1019 1019 HOH HOH . N 7 HOH X 186 1020 1020 HOH HOH . N 7 HOH X 187 1021 1021 HOH HOH . N 7 HOH X 188 1022 1022 HOH HOH . N 7 HOH X 189 1023 1023 HOH HOH . N 7 HOH X 190 1024 1024 HOH HOH . N 7 HOH X 191 1028 1028 HOH HOH . N 7 HOH X 192 1031 1031 HOH HOH . N 7 HOH X 193 1032 1032 HOH HOH . N 7 HOH X 194 1034 1034 HOH HOH . N 7 HOH X 195 1036 1036 HOH HOH . N 7 HOH X 196 1037 1037 HOH HOH . N 7 HOH X 197 1038 1038 HOH HOH . N 7 HOH X 198 1039 1039 HOH HOH . N 7 HOH X 199 1040 1040 HOH HOH . N 7 HOH X 200 1042 1042 HOH HOH . N 7 HOH X 201 1043 1043 HOH HOH . N 7 HOH X 202 1044 1044 HOH HOH . N 7 HOH X 203 1045 1045 HOH HOH . N 7 HOH X 204 1046 1046 HOH HOH . N 7 HOH X 205 1048 1048 HOH HOH . N 7 HOH X 206 1049 1049 HOH HOH . N 7 HOH X 207 1052 1052 HOH HOH . N 7 HOH X 208 1053 1053 HOH HOH . N 7 HOH X 209 1054 1054 HOH HOH . N 7 HOH X 210 1056 1056 HOH HOH . N 7 HOH X 211 1057 1057 HOH HOH . N 7 HOH X 212 1059 1059 HOH HOH . N 7 HOH X 213 1060 1060 HOH HOH . N 7 HOH X 214 1063 1063 HOH HOH . N 7 HOH X 215 1064 1064 HOH HOH . N 7 HOH X 216 1065 1065 HOH HOH . N 7 HOH X 217 1066 1066 HOH HOH . N 7 HOH X 218 1068 1068 HOH HOH . N 7 HOH X 219 1070 1070 HOH HOH . N 7 HOH X 220 1071 1071 HOH HOH . N 7 HOH X 221 1072 1072 HOH HOH . N 7 HOH X 222 1073 1073 HOH HOH . N 7 HOH X 223 1074 1074 HOH HOH . N 7 HOH X 224 1075 1075 HOH HOH . N 7 HOH X 225 1076 1076 HOH HOH . N 7 HOH X 226 1077 1077 HOH HOH . N 7 HOH X 227 1078 1078 HOH HOH . N 7 HOH X 228 1084 1084 HOH HOH . N 7 HOH X 229 1087 1087 HOH HOH . N 7 HOH X 230 1091 1091 HOH HOH . N 7 HOH X 231 1092 1092 HOH HOH . N 7 HOH X 232 1094 1094 HOH HOH . N 7 HOH X 233 1095 1095 HOH HOH . N 7 HOH X 234 1096 1096 HOH HOH . N 7 HOH X 235 1097 1097 HOH HOH . N 7 HOH X 236 1098 1098 HOH HOH . N 7 HOH X 237 1101 1101 HOH HOH . N 7 HOH X 238 1102 1102 HOH HOH . N 7 HOH X 239 1104 1104 HOH HOH . N 7 HOH X 240 1108 1108 HOH HOH . N 7 HOH X 241 1109 1109 HOH HOH . N 7 HOH X 242 1110 1110 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 101.306 _atom_site.Cartn_y -0.598 _atom_site.Cartn_z 36.938 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 86.53 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 783 _atom_site.auth_asym_id X _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #