data_1KWJ # _model_server_result.job_id I48ce9JB9YIwGoJsHg5iEA _model_server_result.datetime_utc '2024-10-20 20:54:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1kwj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":130}' # _entry.id 1KWJ # _exptl.entry_id 1KWJ _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 618.503 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 26 A CYS 26 1_555 B CAB HEC . A HEC 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.813 ? covale ? covale2 A SG CYS 29 A CYS 29 1_555 B CAC HEC . A HEC 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.817 ? covale ? covale3 A SG CYS 49 A CYS 49 1_555 C CAB HEC . A HEC 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.824 ? covale ? covale4 A SG CYS 52 A CYS 52 1_555 C CAC HEC . A HEC 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.812 ? covale ? covale5 A SG CYS 62 A CYS 62 1_555 D CAB HEC . A HEC 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.816 ? covale ? covale6 A SG CYS 65 A CYS 65 1_555 D CAC HEC . A HEC 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.817 ? metalc ? metalc1 A NE2 HIS 17 A HIS 17 1_555 B FE HEC . A HEC 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.975 ? metalc ? metalc2 A NE2 HIS 20 A HIS 20 1_555 C FE HEC . A HEC 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? metalc ? metalc3 A NE2 HIS 30 A HIS 30 1_555 B FE HEC . A HEC 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? metalc ? metalc4 A NE2 HIS 45 A HIS 45 1_555 D FE HEC . A HEC 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? metalc ? metalc5 A NE2 HIS 53 A HIS 53 1_555 C FE HEC . A HEC 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc6 A NE2 HIS 66 A HIS 66 1_555 D FE HEC . A HEC 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1KWJ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEC A 1 130 30 HEC HEM . C 2 HEC A 1 153 53 HEC HEM . D 2 HEC A 1 166 66 HEC HEM . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . B 2 -9.378 -1.674 1.215 1 10 ? FE HEC 130 A 1 HETATM 2 C CHA HEC . . . B 2 -10.28 -0.798 -1.895 1 10 ? CHA HEC 130 A 1 HETATM 3 C CHB HEC . . . B 2 -12.423 -2.58 1.934 1 10 ? CHB HEC 130 A 1 HETATM 4 C CHC HEC . . . B 2 -8.226 -3.015 4.023 1 10 ? CHC HEC 130 A 1 HETATM 5 C CHD HEC . . . B 2 -6.4 -0.302 0.671 1 10 ? CHD HEC 130 A 1 HETATM 6 N NA HEC . . . B 2 -11 -1.647 0.249 1 10 ? NA HEC 130 A 1 HETATM 7 C C1A HEC . . . B 2 -11.188 -1.291 -1.037 1 10 ? C1A HEC 130 A 1 HETATM 8 C C2A HEC . . . B 2 -12.552 -1.58 -1.423 1 10 ? C2A HEC 130 A 1 HETATM 9 C C3A HEC . . . B 2 -13.197 -1.895 -0.263 1 10 ? C3A HEC 130 A 1 HETATM 10 C C4A HEC . . . B 2 -12.163 -2.068 0.727 1 10 ? C4A HEC 130 A 1 HETATM 11 C CMA HEC . . . B 2 -14.691 -2.069 -0.071 1 10 ? CMA HEC 130 A 1 HETATM 12 C CAA HEC . . . B 2 -13.126 -1.694 -2.827 1 10 ? CAA HEC 130 A 1 HETATM 13 C CBA HEC . . . B 2 -13.705 -3.086 -3.16 1 10 ? CBA HEC 130 A 1 HETATM 14 C CGA HEC . . . B 2 -12.772 -4.306 -2.972 1 10 ? CGA HEC 130 A 1 HETATM 15 O O1A HEC . . . B 2 -13.25 -5.446 -3.178 1 10 ? O1A HEC 130 A 1 HETATM 16 O O2A HEC . . . B 2 -11.581 -4.165 -2.604 1 10 ? O2A HEC 130 A 1 HETATM 17 N NB HEC . . . B 2 -10.156 -2.6 2.677 1 10 ? NB HEC 130 A 1 HETATM 18 C C1B HEC . . . B 2 -11.447 -2.857 2.802 1 10 ? C1B HEC 130 A 1 HETATM 19 C C2B HEC . . . B 2 -11.707 -3.542 4.047 1 10 ? C2B HEC 130 A 1 HETATM 20 C C3B HEC . . . B 2 -10.486 -3.722 4.64 1 10 ? C3B HEC 130 A 1 HETATM 21 C C4B HEC . . . B 2 -9.532 -3.094 3.75 1 10 ? C4B HEC 130 A 1 HETATM 22 C CMB HEC . . . B 2 -13.063 -3.99 4.564 1 10 ? CMB HEC 130 A 1 HETATM 23 C CAB HEC . . . B 2 -10.186 -4.49 5.922 1 10 ? CAB HEC 130 A 1 HETATM 24 C CBB HEC . . . B 2 -10.407 -5.999 5.77 1 10 ? CBB HEC 130 A 1 HETATM 25 N NC HEC . . . B 2 -7.689 -1.664 2.138 1 10 ? NC HEC 130 A 1 HETATM 26 C C1C HEC . . . B 2 -7.406 -2.287 3.278 1 10 ? C1C HEC 130 A 1 HETATM 27 C C2C HEC . . . B 2 -6.007 -2.131 3.603 1 10 ? C2C HEC 130 A 1 HETATM 28 C C3C HEC . . . B 2 -5.544 -1.19 2.732 1 10 ? C3C HEC 130 A 1 HETATM 29 C C4C HEC . . . B 2 -6.595 -1.015 1.764 1 10 ? C4C HEC 130 A 1 HETATM 30 C CMC HEC . . . B 2 -5.185 -2.895 4.627 1 10 ? CMC HEC 130 A 1 HETATM 31 C CAC HEC . . . B 2 -4.299 -0.337 2.884 1 10 ? CAC HEC 130 A 1 HETATM 32 C CBC HEC . . . B 2 -2.996 -1.066 2.559 1 10 ? CBC HEC 130 A 1 HETATM 33 N ND HEC . . . B 2 -8.53 -0.723 -0.285 1 10 ? ND HEC 130 A 1 HETATM 34 C C1D HEC . . . B 2 -7.289 -0.271 -0.295 1 10 ? C1D HEC 130 A 1 HETATM 35 C C2D HEC . . . B 2 -6.93 0.217 -1.599 1 10 ? C2D HEC 130 A 1 HETATM 36 C C3D HEC . . . B 2 -8.048 0.075 -2.364 1 10 ? C3D HEC 130 A 1 HETATM 37 C C4D HEC . . . B 2 -9.045 -0.51 -1.494 1 10 ? C4D HEC 130 A 1 HETATM 38 C CMD HEC . . . B 2 -5.542 0.6 -2.072 1 10 ? CMD HEC 130 A 1 HETATM 39 C CAD HEC . . . B 2 -8.144 0.326 -3.854 1 10 ? CAD HEC 130 A 1 HETATM 40 C CBD HEC . . . B 2 -8.081 -0.986 -4.655 1 10 ? CBD HEC 130 A 1 HETATM 41 C CGD HEC . . . B 2 -8.449 -0.825 -6.139 1 10 ? CGD HEC 130 A 1 HETATM 42 O O1D HEC . . . B 2 -9.553 -0.294 -6.403 1 10 ? O1D HEC 130 A 1 HETATM 43 O O2D HEC . . . B 2 -7.619 -1.242 -6.98 1 10 ? O2D HEC 130 A 1 HETATM 44 H HHA HEC . . . B 2 -10.543 -0.606 -2.915 1 10 ? HHA HEC 130 A 1 HETATM 45 H HHB HEC . . . B 2 -13.426 -2.877 2.168 1 10 ? HHB HEC 130 A 1 HETATM 46 H HHC HEC . . . B 2 -7.823 -3.468 4.897 1 10 ? HHC HEC 130 A 1 HETATM 47 H HHD HEC . . . B 2 -5.442 0.133 0.497 1 10 ? HHD HEC 130 A 1 HETATM 48 H HMA1 HEC . . . B 2 -15.227 -1.665 -0.929 1 10 ? HMA1 HEC 130 A 1 HETATM 49 H HMA2 HEC . . . B 2 -14.931 -3.128 0.032 1 10 ? HMA2 HEC 130 A 1 HETATM 50 H HMA3 HEC . . . B 2 -15.019 -1.526 0.818 1 10 ? HMA3 HEC 130 A 1 HETATM 51 H HAA1 HEC . . . B 2 -12.362 -1.505 -3.578 1 10 ? HAA1 HEC 130 A 1 HETATM 52 H HAA2 HEC . . . B 2 -13.912 -0.949 -2.951 1 10 ? HAA2 HEC 130 A 1 HETATM 53 H HBA1 HEC . . . B 2 -14.024 -3.059 -4.203 1 10 ? HBA1 HEC 130 A 1 HETATM 54 H HBA2 HEC . . . B 2 -14.597 -3.245 -2.552 1 10 ? HBA2 HEC 130 A 1 HETATM 55 H HMB1 HEC . . . B 2 -13.526 -4.676 3.855 1 10 ? HMB1 HEC 130 A 1 HETATM 56 H HMB2 HEC . . . B 2 -12.973 -4.499 5.521 1 10 ? HMB2 HEC 130 A 1 HETATM 57 H HMB3 HEC . . . B 2 -13.703 -3.12 4.706 1 10 ? HMB3 HEC 130 A 1 HETATM 58 H HAB HEC . . . B 2 -9.152 -4.355 6.203 1 10 ? HAB HEC 130 A 1 HETATM 59 H HBB1 HEC . . . B 2 -11.44 -6.214 5.498 1 10 ? HBB1 HEC 130 A 1 HETATM 60 H HBB2 HEC . . . B 2 -9.749 -6.395 4.995 1 10 ? HBB2 HEC 130 A 1 HETATM 61 H HBB3 HEC . . . B 2 -10.188 -6.504 6.712 1 10 ? HBB3 HEC 130 A 1 HETATM 62 H HMC1 HEC . . . B 2 -5.712 -2.988 5.574 1 10 ? HMC1 HEC 130 A 1 HETATM 63 H HMC2 HEC . . . B 2 -4.945 -3.883 4.22 1 10 ? HMC2 HEC 130 A 1 HETATM 64 H HMC3 HEC . . . B 2 -4.253 -2.369 4.823 1 10 ? HMC3 HEC 130 A 1 HETATM 65 H HAC HEC . . . B 2 -4.327 0.517 2.211 1 10 ? HAC HEC 130 A 1 HETATM 66 H HBC1 HEC . . . B 2 -2.918 -2.019 3.08 1 10 ? HBC1 HEC 130 A 1 HETATM 67 H HBC2 HEC . . . B 2 -2.965 -1.244 1.478 1 10 ? HBC2 HEC 130 A 1 HETATM 68 H HBC3 HEC . . . B 2 -2.156 -0.438 2.841 1 10 ? HBC3 HEC 130 A 1 HETATM 69 H HMD1 HEC . . . B 2 -5.464 0.391 -3.136 1 10 ? HMD1 HEC 130 A 1 HETATM 70 H HMD2 HEC . . . B 2 -5.379 1.661 -1.889 1 10 ? HMD2 HEC 130 A 1 HETATM 71 H HMD3 HEC . . . B 2 -4.767 0.016 -1.565 1 10 ? HMD3 HEC 130 A 1 HETATM 72 H HAD1 HEC . . . B 2 -7.346 0.991 -4.183 1 10 ? HAD1 HEC 130 A 1 HETATM 73 H HAD2 HEC . . . B 2 -9.069 0.836 -4.095 1 10 ? HAD2 HEC 130 A 1 HETATM 74 H HBD1 HEC . . . B 2 -8.773 -1.703 -4.212 1 10 ? HBD1 HEC 130 A 1 HETATM 75 H HBD2 HEC . . . B 2 -7.072 -1.393 -4.557 1 10 ? HBD2 HEC 130 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 246 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 75 #