data_1KWP # _model_server_result.job_id txuJqW-1Eq5iw0j8uo5fvg _model_server_result.datetime_utc '2024-10-15 11:30:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1kwp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":407}' # _entry.id 1KWP # _exptl.entry_id 1KWP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 200.59 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MERCURY (II) ION' _entity.pdbx_number_of_molecules 14 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1KWP _cell.length_a 143.944 _cell.length_b 143.944 _cell.length_c 90.273 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KWP _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PQS hexameric 6 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,Q 1 1 B,J,K,L,M,N,O,P,R 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 3 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLN 96 A GLN 96 1_555 C HG HG . A HG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? metalc ? metalc2 A SG CYS 98 A CYS 98 1_555 C HG HG . A HG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? metalc ? metalc3 A SG CYS 140 A CYS 140 1_555 G HG HG . A HG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc4 A O SER 169 A SER 169 1_555 E HG HG . A HG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.05 ? metalc ? metalc5 A O LEU 203 A LEU 203 1_555 E HG HG . A HG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.635 ? metalc ? metalc6 E HG HG . A HG 403 1_555 Q O HOH . A HOH 465 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc7 G HG HG . A HG 405 1_555 Q O HOH . A HOH 458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc8 B SG CYS 98 B CYS 98 1_555 J HG HG . B HG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc9 B SG CYS 114 B CYS 114 1_555 K HG HG . B HG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? metalc ? metalc10 B O LEU 203 B LEU 203 1_555 L HG HG . B HG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.152 ? metalc ? metalc11 B O TYR 254 B TYR 254 1_555 P HG HG . B HG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.819 ? metalc ? metalc12 B N CYS 258 B CYS 258 1_555 P HG HG . B HG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? # _chem_comp.formula 'Hg 2' _chem_comp.formula_weight 200.59 _chem_comp.id HG _chem_comp.mon_nstd_flag . _chem_comp.name 'MERCURY (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1KWP _atom_sites.fract_transf_matrix[1][1] 0.006947 _atom_sites.fract_transf_matrix[1][2] 0.004011 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008022 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011078 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HG A 1 401 1 HG HG . D 2 HG A 1 402 2 HG HG . E 2 HG A 1 403 3 HG HG . F 2 HG A 1 404 4 HG HG . G 2 HG A 1 405 5 HG HG . H 2 HG A 1 406 6 HG HG . I 2 HG A 1 407 7 HG HG . J 2 HG B 1 401 8 HG HG . K 2 HG B 1 402 9 HG HG . L 2 HG B 1 403 10 HG HG . M 2 HG B 1 404 11 HG HG . N 2 HG B 1 405 12 HG HG . O 2 HG B 1 406 13 HG HG . P 2 HG B 1 407 14 HG HG . Q 3 HOH A 1 408 35 HOH WAT . Q 3 HOH A 2 409 36 HOH WAT . Q 3 HOH A 3 410 37 HOH WAT . Q 3 HOH A 4 411 39 HOH WAT . Q 3 HOH A 5 412 41 HOH WAT . Q 3 HOH A 6 413 47 HOH WAT . Q 3 HOH A 7 414 48 HOH WAT . Q 3 HOH A 8 415 49 HOH WAT . Q 3 HOH A 9 416 51 HOH WAT . Q 3 HOH A 10 417 54 HOH WAT . Q 3 HOH A 11 418 57 HOH WAT . Q 3 HOH A 12 419 63 HOH WAT . Q 3 HOH A 13 420 66 HOH WAT . Q 3 HOH A 14 421 70 HOH WAT . Q 3 HOH A 15 422 71 HOH WAT . Q 3 HOH A 16 423 72 HOH WAT . Q 3 HOH A 17 424 73 HOH WAT . Q 3 HOH A 18 425 74 HOH WAT . Q 3 HOH A 19 426 75 HOH WAT . Q 3 HOH A 20 427 76 HOH WAT . Q 3 HOH A 21 428 77 HOH WAT . Q 3 HOH A 22 429 78 HOH WAT . Q 3 HOH A 23 430 79 HOH WAT . Q 3 HOH A 24 431 80 HOH WAT . Q 3 HOH A 25 432 85 HOH WAT . Q 3 HOH A 26 433 86 HOH WAT . Q 3 HOH A 27 434 90 HOH WAT . Q 3 HOH A 28 435 93 HOH WAT . Q 3 HOH A 29 436 96 HOH WAT . Q 3 HOH A 30 437 97 HOH WAT . Q 3 HOH A 31 438 101 HOH WAT . Q 3 HOH A 32 439 102 HOH WAT . Q 3 HOH A 33 440 111 HOH WAT . Q 3 HOH A 34 441 112 HOH WAT . Q 3 HOH A 35 442 114 HOH WAT . Q 3 HOH A 36 443 117 HOH WAT . Q 3 HOH A 37 444 119 HOH WAT . Q 3 HOH A 38 445 121 HOH WAT . Q 3 HOH A 39 446 122 HOH WAT . Q 3 HOH A 40 447 123 HOH WAT . Q 3 HOH A 41 448 126 HOH WAT . Q 3 HOH A 42 449 127 HOH WAT . Q 3 HOH A 43 450 128 HOH WAT . Q 3 HOH A 44 451 129 HOH WAT . Q 3 HOH A 45 452 131 HOH WAT . Q 3 HOH A 46 453 134 HOH WAT . Q 3 HOH A 47 454 136 HOH WAT . Q 3 HOH A 48 455 137 HOH WAT . Q 3 HOH A 49 456 139 HOH WAT . Q 3 HOH A 50 457 141 HOH WAT . Q 3 HOH A 51 458 143 HOH WAT . Q 3 HOH A 52 459 144 HOH WAT . Q 3 HOH A 53 460 145 HOH WAT . Q 3 HOH A 54 461 150 HOH WAT . Q 3 HOH A 55 462 151 HOH WAT . Q 3 HOH A 56 463 152 HOH WAT . Q 3 HOH A 57 464 153 HOH WAT . Q 3 HOH A 58 465 157 HOH WAT . Q 3 HOH A 59 466 161 HOH WAT . Q 3 HOH A 60 467 162 HOH WAT . Q 3 HOH A 61 468 166 HOH WAT . Q 3 HOH A 62 469 167 HOH WAT . R 3 HOH B 1 408 34 HOH WAT . R 3 HOH B 2 409 38 HOH WAT . R 3 HOH B 3 410 40 HOH WAT . R 3 HOH B 4 411 42 HOH WAT . R 3 HOH B 5 412 43 HOH WAT . R 3 HOH B 6 413 44 HOH WAT . R 3 HOH B 7 414 45 HOH WAT . R 3 HOH B 8 415 46 HOH WAT . R 3 HOH B 9 416 50 HOH WAT . R 3 HOH B 10 417 52 HOH WAT . R 3 HOH B 11 418 53 HOH WAT . R 3 HOH B 12 419 55 HOH WAT . R 3 HOH B 13 420 56 HOH WAT . R 3 HOH B 14 421 58 HOH WAT . R 3 HOH B 15 422 59 HOH WAT . R 3 HOH B 16 423 60 HOH WAT . R 3 HOH B 17 424 61 HOH WAT . R 3 HOH B 18 425 62 HOH WAT . R 3 HOH B 19 426 64 HOH WAT . R 3 HOH B 20 427 65 HOH WAT . R 3 HOH B 21 428 67 HOH WAT . R 3 HOH B 22 429 68 HOH WAT . R 3 HOH B 23 430 69 HOH WAT . R 3 HOH B 24 431 81 HOH WAT . R 3 HOH B 25 432 82 HOH WAT . R 3 HOH B 26 433 83 HOH WAT . R 3 HOH B 27 434 84 HOH WAT . R 3 HOH B 28 435 87 HOH WAT . R 3 HOH B 29 436 88 HOH WAT . R 3 HOH B 30 437 89 HOH WAT . R 3 HOH B 31 438 91 HOH WAT . R 3 HOH B 32 439 92 HOH WAT . R 3 HOH B 33 440 94 HOH WAT . R 3 HOH B 34 441 95 HOH WAT . R 3 HOH B 35 442 98 HOH WAT . R 3 HOH B 36 443 99 HOH WAT . R 3 HOH B 37 444 100 HOH WAT . R 3 HOH B 38 445 103 HOH WAT . R 3 HOH B 39 446 104 HOH WAT . R 3 HOH B 40 447 105 HOH WAT . R 3 HOH B 41 448 106 HOH WAT . R 3 HOH B 42 449 107 HOH WAT . R 3 HOH B 43 450 108 HOH WAT . R 3 HOH B 44 451 109 HOH WAT . R 3 HOH B 45 452 110 HOH WAT . R 3 HOH B 46 453 113 HOH WAT . R 3 HOH B 47 454 115 HOH WAT . R 3 HOH B 48 455 116 HOH WAT . R 3 HOH B 49 456 118 HOH WAT . R 3 HOH B 50 457 120 HOH WAT . R 3 HOH B 51 458 124 HOH WAT . R 3 HOH B 52 459 125 HOH WAT . R 3 HOH B 53 460 130 HOH WAT . R 3 HOH B 54 461 132 HOH WAT . R 3 HOH B 55 462 133 HOH WAT . R 3 HOH B 56 463 135 HOH WAT . R 3 HOH B 57 464 138 HOH WAT . R 3 HOH B 58 465 140 HOH WAT . R 3 HOH B 59 466 142 HOH WAT . R 3 HOH B 60 467 146 HOH WAT . R 3 HOH B 61 468 147 HOH WAT . R 3 HOH B 62 469 148 HOH WAT . R 3 HOH B 63 470 149 HOH WAT . R 3 HOH B 64 471 154 HOH WAT . R 3 HOH B 65 472 155 HOH WAT . R 3 HOH B 66 473 156 HOH WAT . R 3 HOH B 67 474 158 HOH WAT . R 3 HOH B 68 475 159 HOH WAT . R 3 HOH B 69 476 160 HOH WAT . R 3 HOH B 70 477 163 HOH WAT . R 3 HOH B 71 478 164 HOH WAT . R 3 HOH B 72 479 165 HOH WAT . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol HG _atom_site.label_atom_id HG _atom_site.label_comp_id HG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id P _atom_site.label_entity_id 2 _atom_site.Cartn_x 8.253 _atom_site.Cartn_y 43.56 _atom_site.Cartn_z 3.952 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 70.36 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id HG _atom_site.auth_comp_id HG _atom_site.auth_seq_id 407 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #