data_1KYN # _model_server_result.job_id kPFR-mhmtCDKb8AIZ8IdcQ _model_server_result.datetime_utc '2024-10-19 03:55:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1kyn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":701}' # _entry.id 1KYN # _exptl.entry_id 1KYN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 376.342 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2-NAPHTHALEN-2-YL-1-NAPHTHALEN-1-YL-2-OXO-ETHYL)-PHOSPHONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1KYN _cell.length_a 59.44 _cell.length_b 59.44 _cell.length_c 130.62 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KYN _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C 1 1 B,D 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 29 A CYS 42 1_555 A SG CYS 45 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 122 A CYS 136 1_555 A SG CYS 187 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 A SG CYS 152 A CYS 168 1_555 A SG CYS 166 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 B SG CYS 29 B CYS 342 1_555 B SG CYS 45 B CYS 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf5 B SG CYS 122 B CYS 436 1_555 B SG CYS 187 B CYS 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf6 B SG CYS 152 B CYS 468 1_555 B SG CYS 166 B CYS 482 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C22 H17 O4 P' _chem_comp.formula_weight 376.342 _chem_comp.id KTP _chem_comp.mon_nstd_flag . _chem_comp.name '(2-NAPHTHALEN-2-YL-1-NAPHTHALEN-1-YL-2-OXO-ETHYL)-PHOSPHONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'BIS-NAPTHYL BETA-KETOPHOSPHONIC ACID' # _atom_sites.entry_id 1KYN _atom_sites.fract_transf_matrix[1][1] 0.016824 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016824 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007656 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 KTP A 1 601 601 KTP INH . D 2 KTP B 1 701 701 KTP INH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P1 KTP . . . D 2 58.423 0.42 11.18 1 26 ? P1 KTP 701 B 1 HETATM 2 O O1 KTP . . . D 2 58.506 -0.95 11.701 1 26 ? O1 KTP 701 B 1 HETATM 3 O O2 KTP . . . D 2 56.194 -0.236 7.891 1 26 ? O2 KTP 701 B 1 HETATM 4 C C1 KTP . . . D 2 57.647 1.035 9.543 1 26 ? C1 KTP 701 B 1 HETATM 5 C C2 KTP . . . D 2 56.124 0.554 8.757 1 26 ? C2 KTP 701 B 1 HETATM 6 O O3 KTP . . . D 2 58.527 1.454 12.422 1 26 ? O3 KTP 701 B 1 HETATM 7 O O4 KTP . . . D 2 56.897 0.171 11.618 1 26 ? O4 KTP 701 B 1 HETATM 8 C C3 KTP . . . D 2 54.598 0.848 8.832 1 26 ? C3 KTP 701 B 1 HETATM 9 C C4 KTP . . . D 2 54.061 1.758 9.762 1 26 ? C4 KTP 701 B 1 HETATM 10 C C5 KTP . . . D 2 52.67 2.008 9.814 1 26 ? C5 KTP 701 B 1 HETATM 11 C C6 KTP . . . D 2 52.143 2.922 10.743 1 26 ? C6 KTP 701 B 1 HETATM 12 C C7 KTP . . . D 2 50.753 3.159 10.783 1 26 ? C7 KTP 701 B 1 HETATM 13 C C8 KTP . . . D 2 49.872 2.469 9.882 1 26 ? C8 KTP 701 B 1 HETATM 14 C C9 KTP . . . D 2 50.386 1.543 8.936 1 26 ? C9 KTP 701 B 1 HETATM 15 C C10 KTP . . . D 2 51.762 1.306 8.892 1 26 ? C10 KTP 701 B 1 HETATM 16 C C11 KTP . . . D 2 52.278 0.404 7.974 1 26 ? C11 KTP 701 B 1 HETATM 17 C C12 KTP . . . D 2 53.668 0.179 7.943 1 26 ? C12 KTP 701 B 1 HETATM 18 C C13 KTP . . . D 2 58.587 3.1 8.395 1 26 ? C13 KTP 701 B 1 HETATM 19 C C14 KTP . . . D 2 57.861 2.62 9.504 1 26 ? C14 KTP 701 B 1 HETATM 20 C C15 KTP . . . D 2 57.384 3.645 10.499 1 26 ? C15 KTP 701 B 1 HETATM 21 C C16 KTP . . . D 2 56.643 3.326 11.661 1 26 ? C16 KTP 701 B 1 HETATM 22 C C17 KTP . . . D 2 56.226 4.35 12.573 1 26 ? C17 KTP 701 B 1 HETATM 23 C C18 KTP . . . D 2 56.551 5.719 12.325 1 26 ? C18 KTP 701 B 1 HETATM 24 C C19 KTP . . . D 2 57.293 6.076 11.16 1 26 ? C19 KTP 701 B 1 HETATM 25 C C20 KTP . . . D 2 57.709 5.077 10.254 1 26 ? C20 KTP 701 B 1 HETATM 26 C C21 KTP . . . D 2 58.44 5.452 9.12 1 26 ? C21 KTP 701 B 1 HETATM 27 C C22 KTP . . . D 2 58.875 4.473 8.193 1 26 ? C22 KTP 701 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 27 #