data_1KZ6 # _model_server_result.job_id slZAL194zZ5NiGHWnCnJNw _model_server_result.datetime_utc '2024-11-14 15:21:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1kz6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1004}' # _entry.id 1KZ6 # _exptl.entry_id 1KZ6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1KZ6 _cell.length_a 111.521 _cell.length_b 145.378 _cell.length_c 129.119 _cell.Z_PDB 40 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KZ6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA pentameric 5 author_and_software_defined_assembly 1 PISA decameric 10 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 111.521 0 64.5595 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 247 n n P O2 PO4 sing 248 n n P O3 PO4 sing 249 n n P O4 PO4 sing 250 n n # _atom_sites.entry_id 1KZ6 _atom_sites.fract_transf_matrix[1][1] 0.008967 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006879 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007745 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 PO4 A 1 1004 4 PO4 PO4 . G 2 PO4 B 1 1001 1 PO4 PO4 . H 2 PO4 C 1 1003 3 PO4 PO4 . I 2 PO4 D 1 1005 5 PO4 PO4 . J 2 PO4 E 1 1002 2 PO4 PO4 . K 3 HOH A 1 1005 1 HOH HOH . K 3 HOH A 2 1006 3 HOH HOH . K 3 HOH A 3 1007 4 HOH HOH . K 3 HOH A 4 1008 26 HOH HOH . K 3 HOH A 5 1009 28 HOH HOH . K 3 HOH A 6 1010 29 HOH HOH . K 3 HOH A 7 1011 30 HOH HOH . K 3 HOH A 8 1012 34 HOH HOH . K 3 HOH A 9 1013 45 HOH HOH . K 3 HOH A 10 1014 52 HOH HOH . K 3 HOH A 11 1015 53 HOH HOH . K 3 HOH A 12 1016 54 HOH HOH . K 3 HOH A 13 1017 62 HOH HOH . K 3 HOH A 14 1018 66 HOH HOH . K 3 HOH A 15 1019 74 HOH HOH . K 3 HOH A 16 1020 76 HOH HOH . K 3 HOH A 17 1021 82 HOH HOH . K 3 HOH A 18 1022 83 HOH HOH . K 3 HOH A 19 1023 89 HOH HOH . L 3 HOH B 1 1002 2 HOH HOH . L 3 HOH B 2 1003 7 HOH HOH . L 3 HOH B 3 1004 9 HOH HOH . L 3 HOH B 4 1005 11 HOH HOH . L 3 HOH B 5 1006 24 HOH HOH . L 3 HOH B 6 1007 39 HOH HOH . L 3 HOH B 7 1008 46 HOH HOH . L 3 HOH B 8 1009 47 HOH HOH . L 3 HOH B 9 1010 49 HOH HOH . L 3 HOH B 10 1011 60 HOH HOH . L 3 HOH B 11 1012 61 HOH HOH . L 3 HOH B 12 1013 68 HOH HOH . L 3 HOH B 13 1014 69 HOH HOH . L 3 HOH B 14 1015 70 HOH HOH . L 3 HOH B 15 1016 79 HOH HOH . L 3 HOH B 16 1017 81 HOH HOH . L 3 HOH B 17 1018 85 HOH HOH . L 3 HOH B 18 1019 86 HOH HOH . M 3 HOH C 1 1004 10 HOH HOH . M 3 HOH C 2 1005 12 HOH HOH . M 3 HOH C 3 1006 13 HOH HOH . M 3 HOH C 4 1007 16 HOH HOH . M 3 HOH C 5 1008 20 HOH HOH . M 3 HOH C 6 1009 21 HOH HOH . M 3 HOH C 7 1010 22 HOH HOH . M 3 HOH C 8 1011 23 HOH HOH . M 3 HOH C 9 1012 32 HOH HOH . M 3 HOH C 10 1013 37 HOH HOH . M 3 HOH C 11 1014 41 HOH HOH . M 3 HOH C 12 1015 42 HOH HOH . M 3 HOH C 13 1016 48 HOH HOH . M 3 HOH C 14 1017 55 HOH HOH . M 3 HOH C 15 1018 56 HOH HOH . M 3 HOH C 16 1019 63 HOH HOH . M 3 HOH C 17 1020 64 HOH HOH . M 3 HOH C 18 1021 72 HOH HOH . M 3 HOH C 19 1022 73 HOH HOH . M 3 HOH C 20 1023 78 HOH HOH . M 3 HOH C 21 1024 80 HOH HOH . M 3 HOH C 22 1025 88 HOH HOH . N 3 HOH D 1 1006 5 HOH HOH . N 3 HOH D 2 1007 19 HOH HOH . N 3 HOH D 3 1008 25 HOH HOH . N 3 HOH D 4 1009 31 HOH HOH . N 3 HOH D 5 1010 35 HOH HOH . N 3 HOH D 6 1011 57 HOH HOH . N 3 HOH D 7 1012 67 HOH HOH . N 3 HOH D 8 1013 71 HOH HOH . N 3 HOH D 9 1014 75 HOH HOH . N 3 HOH D 10 1015 77 HOH HOH . O 3 HOH E 1 1003 6 HOH HOH . O 3 HOH E 2 1004 8 HOH HOH . O 3 HOH E 3 1005 14 HOH HOH . O 3 HOH E 4 1006 15 HOH HOH . O 3 HOH E 5 1007 17 HOH HOH . O 3 HOH E 6 1008 18 HOH HOH . O 3 HOH E 7 1009 27 HOH HOH . O 3 HOH E 8 1010 33 HOH HOH . O 3 HOH E 9 1011 36 HOH HOH . O 3 HOH E 10 1012 38 HOH HOH . O 3 HOH E 11 1013 40 HOH HOH . O 3 HOH E 12 1014 43 HOH HOH . O 3 HOH E 13 1015 44 HOH HOH . O 3 HOH E 14 1016 50 HOH HOH . O 3 HOH E 15 1017 51 HOH HOH . O 3 HOH E 16 1018 58 HOH HOH . O 3 HOH E 17 1019 59 HOH HOH . O 3 HOH E 18 1020 65 HOH HOH . O 3 HOH E 19 1021 84 HOH HOH . O 3 HOH E 20 1022 87 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . F 2 67.353 48.565 41.567 1 39.45 ? P PO4 1004 A 1 HETATM 2 O O1 PO4 . . . F 2 68.355 47.58 42.04 1 38.72 ? O1 PO4 1004 A 1 HETATM 3 O O2 PO4 . . . F 2 68.042 49.846 41.219 1 40 ? O2 PO4 1004 A 1 HETATM 4 O O3 PO4 . . . F 2 66.663 48.02 40.365 1 36.77 ? O3 PO4 1004 A 1 HETATM 5 O O4 PO4 . . . F 2 66.357 48.822 42.644 1 38.45 ? O4 PO4 1004 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #