data_1L0V # _model_server_result.job_id gEADGqXCeA225kysHt7Hdg _model_server_result.datetime_utc '2024-10-12 12:25:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1l0v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":803}' # _entry.id 1L0V # _exptl.entry_id 1L0V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1L0V _cell.length_a 96.59 _cell.length_b 138.09 _cell.length_c 275.25 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1L0V _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 PQS octameric 8 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,I,J,K,L,M,N,O,P,Q 1 1 E,F,G,H,R,S,T,U,V,W,X,Y,Z 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 J N N ? 6 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NE2 HIS 45 A HIS 44 1_555 J C8M FAD . A FAD 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.82 ? covale ? covale2 E NE2 HIS 45 M HIS 44 1_555 S C8M FAD . M FAD 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? metalc ? metalc1 B SG CYS 57 B CYS 57 1_555 K FE2 FES . B FES 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc2 B SG CYS 62 B CYS 62 1_555 K FE2 FES . B FES 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc3 B SG CYS 65 B CYS 65 1_555 K FE1 FES . B FES 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc4 B SG CYS 77 B CYS 77 1_555 K FE1 FES . B FES 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc5 B SG CYS 148 B CYS 148 1_555 M FE3 SF4 . B SF4 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc6 B SG CYS 151 B CYS 151 1_555 M FE1 SF4 . B SF4 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc7 B SG CYS 154 B CYS 154 1_555 M FE2 SF4 . B SF4 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc8 B SG CYS 158 B CYS 158 1_555 L FE4 F3S . B F3S 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc9 B SG CYS 204 B CYS 204 1_555 L FE1 F3S . B F3S 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc10 B SG CYS 210 B CYS 210 1_555 L FE3 F3S . B F3S 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc11 B SG CYS 214 B CYS 214 1_555 M FE4 SF4 . B SF4 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc12 F SG CYS 57 N CYS 57 1_555 T FE2 FES . N FES 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc13 F SG CYS 62 N CYS 62 1_555 T FE2 FES . N FES 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? metalc ? metalc14 F SG CYS 65 N CYS 65 1_555 T FE1 FES . N FES 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc15 F SG CYS 77 N CYS 77 1_555 T FE1 FES . N FES 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc16 F SG CYS 148 N CYS 148 1_555 V FE3 SF4 . N SF4 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc17 F SG CYS 151 N CYS 151 1_555 V FE1 SF4 . N SF4 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc18 F SG CYS 154 N CYS 154 1_555 V FE2 SF4 . N SF4 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc19 F SG CYS 158 N CYS 158 1_555 U FE4 F3S . N F3S 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc20 F SG CYS 204 N CYS 204 1_555 U FE1 F3S . N F3S 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc21 F SG CYS 210 N CYS 210 1_555 U FE3 F3S . N F3S 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc22 F SG CYS 214 N CYS 214 1_555 V FE4 SF4 . N SF4 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 186 n n PA O2A FAD sing 187 n n PA O5B FAD sing 188 n n PA O3P FAD sing 189 n n O2A HOA2 FAD sing 190 n n O5B C5B FAD sing 191 n n C5B C4B FAD sing 192 n n C5B H51A FAD sing 193 n n C5B H52A FAD sing 194 n n C4B O4B FAD sing 195 n n C4B C3B FAD sing 196 n n C4B H4B FAD sing 197 n n O4B C1B FAD sing 198 n n C3B O3B FAD sing 199 n n C3B C2B FAD sing 200 n n C3B H3B FAD sing 201 n n O3B HO3A FAD sing 202 n n C2B O2B FAD sing 203 n n C2B C1B FAD sing 204 n n C2B H2B FAD sing 205 n n O2B HO2A FAD sing 206 n n C1B N9A FAD sing 207 n n C1B H1B FAD sing 208 n n N9A C8A FAD sing 209 n y N9A C4A FAD sing 210 n y C8A N7A FAD doub 211 n y C8A H8A FAD sing 212 n n N7A C5A FAD sing 213 n y C5A C6A FAD sing 214 n y C5A C4A FAD doub 215 n y C6A N6A FAD sing 216 n n C6A N1A FAD doub 217 n y N6A H61A FAD sing 218 n n N6A H62A FAD sing 219 n n N1A C2A FAD sing 220 n y C2A N3A FAD doub 221 n y C2A H2A FAD sing 222 n n N3A C4A FAD sing 223 n y N1 C2 FAD sing 224 n n N1 C10 FAD doub 225 n n C2 O2 FAD doub 226 n n C2 N3 FAD sing 227 n n N3 C4 FAD sing 228 n n N3 HN3 FAD sing 229 n n C4 O4 FAD doub 230 n n C4 C4X FAD sing 231 n n C4X N5 FAD doub 232 n n C4X C10 FAD sing 233 n n N5 C5X FAD sing 234 n n C5X C6 FAD doub 235 n y C5X C9A FAD sing 236 n y C6 C7 FAD sing 237 n y C6 H6 FAD sing 238 n n C7 C7M FAD sing 239 n n C7 C8 FAD doub 240 n y C7M HM71 FAD sing 241 n n C7M HM72 FAD sing 242 n n C7M HM73 FAD sing 243 n n C8 C8M FAD sing 244 n n C8 C9 FAD sing 245 n y C8M HM81 FAD sing 246 n n C8M HM82 FAD sing 247 n n C8M HM83 FAD sing 248 n n C9 C9A FAD doub 249 n y C9 H9 FAD sing 250 n n C9A N10 FAD sing 251 n n N10 C10 FAD sing 252 n n N10 C1' FAD sing 253 n n C1' C2' FAD sing 254 n n C1' "H1'1" FAD sing 255 n n C1' "H1'2" FAD sing 256 n n C2' O2' FAD sing 257 n n C2' C3' FAD sing 258 n n C2' H2' FAD sing 259 n n O2' HO2' FAD sing 260 n n C3' O3' FAD sing 261 n n C3' C4' FAD sing 262 n n C3' H3' FAD sing 263 n n O3' HO3' FAD sing 264 n n C4' O4' FAD sing 265 n n C4' C5' FAD sing 266 n n C4' H4' FAD sing 267 n n O4' HO4' FAD sing 268 n n C5' O5' FAD sing 269 n n C5' "H5'1" FAD sing 270 n n C5' "H5'2" FAD sing 271 n n O5' P FAD sing 272 n n P O1P FAD doub 273 n n P O2P FAD sing 274 n n P O3P FAD sing 275 n n O2P HOP2 FAD sing 276 n n # _atom_sites.entry_id 1L0V _atom_sites.fract_transf_matrix[1][1] 0.010353 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007242 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003633 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 5 OAA A 1 702 2 OAA OAA . J 6 FAD A 1 703 1 FAD FAD . K 7 FES B 1 244 1 FES FES . L 8 F3S B 1 245 1 F3S F3S . M 9 SF4 B 1 246 1 SF4 FS4 . N 10 MQ7 B 1 701 4 MQ7 MQ7 . O 10 MQ7 D 1 700 3 MQ7 MQ7 . P 11 CE1 D 1 810 5 CE1 CE1 . Q 11 CE1 D 1 710 6 CE1 CE1 . R 5 OAA M 1 802 2 OAA OAA . S 6 FAD M 1 803 1 FAD FAD . T 7 FES N 1 244 1 FES FES . U 8 F3S N 1 245 1 F3S F3S . V 9 SF4 N 1 246 1 SF4 FS4 . W 10 MQ7 N 1 801 4 MQ7 MQ7 . X 11 CE1 O 1 811 7 CE1 CE1 . Y 11 CE1 O 1 812 8 CE1 CE1 . Z 10 MQ7 P 1 800 3 MQ7 MQ7 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . S 6 17.264 -40.156 -20.101 1 50.89 ? PA FAD 803 M 1 HETATM 2 O O1A FAD . . . S 6 17.651 -40.294 -21.575 1 50.89 ? O1A FAD 803 M 1 HETATM 3 O O2A FAD . . . S 6 17.537 -41.474 -19.347 1 50.89 ? O2A FAD 803 M 1 HETATM 4 O O5B FAD . . . S 6 18.132 -39.033 -19.508 1 50.89 ? O5B FAD 803 M 1 HETATM 5 C C5B FAD . . . S 6 18.16 -38.675 -18.096 1 50.89 ? C5B FAD 803 M 1 HETATM 6 C C4B FAD . . . S 6 18.317 -37.169 -17.916 1 50.89 ? C4B FAD 803 M 1 HETATM 7 O O4B FAD . . . S 6 18.326 -36.827 -16.501 1 50.89 ? O4B FAD 803 M 1 HETATM 8 C C3B FAD . . . S 6 19.655 -36.689 -18.46 1 50.89 ? C3B FAD 803 M 1 HETATM 9 O O3B FAD . . . S 6 19.513 -35.545 -19.328 1 50.89 ? O3B FAD 803 M 1 HETATM 10 C C2B FAD . . . S 6 20.573 -36.501 -17.212 1 50.89 ? C2B FAD 803 M 1 HETATM 11 O O2B FAD . . . S 6 21.592 -35.509 -17.432 1 50.89 ? O2B FAD 803 M 1 HETATM 12 C C1B FAD . . . S 6 19.555 -36.156 -16.141 1 50.89 ? C1B FAD 803 M 1 HETATM 13 N N9A FAD . . . S 6 20.032 -36.551 -14.764 1 50.89 ? N9A FAD 803 M 1 HETATM 14 C C8A FAD . . . S 6 20.172 -37.832 -14.289 1 50.89 ? C8A FAD 803 M 1 HETATM 15 N N7A FAD . . . S 6 20.624 -37.8 -13.028 1 50.89 ? N7A FAD 803 M 1 HETATM 16 C C5A FAD . . . S 6 20.778 -36.515 -12.691 1 50.89 ? C5A FAD 803 M 1 HETATM 17 C C6A FAD . . . S 6 21.19 -35.837 -11.552 1 50.89 ? C6A FAD 803 M 1 HETATM 18 N N6A FAD . . . S 6 21.576 -36.531 -10.452 1 50.89 ? N6A FAD 803 M 1 HETATM 19 N N1A FAD . . . S 6 21.237 -34.444 -11.526 1 50.89 ? N1A FAD 803 M 1 HETATM 20 C C2A FAD . . . S 6 20.861 -33.704 -12.615 1 50.89 ? C2A FAD 803 M 1 HETATM 21 N N3A FAD . . . S 6 20.439 -34.305 -13.748 1 50.89 ? N3A FAD 803 M 1 HETATM 22 C C4A FAD . . . S 6 20.395 -35.689 -13.813 1 50.89 ? C4A FAD 803 M 1 HETATM 23 N N1 FAD . . . S 6 12.77 -47.745 -26.453 1 50.89 ? N1 FAD 803 M 1 HETATM 24 C C2 FAD . . . S 6 12.019 -47.907 -27.574 1 50.89 ? C2 FAD 803 M 1 HETATM 25 O O2 FAD . . . S 6 10.799 -48.033 -27.515 1 50.89 ? O2 FAD 803 M 1 HETATM 26 N N3 FAD . . . S 6 12.671 -48.228 -28.806 1 50.89 ? N3 FAD 803 M 1 HETATM 27 C C4 FAD . . . S 6 14.073 -48.37 -28.84 1 50.89 ? C4 FAD 803 M 1 HETATM 28 O O4 FAD . . . S 6 14.666 -48.621 -29.905 1 50.89 ? O4 FAD 803 M 1 HETATM 29 C C4X FAD . . . S 6 14.786 -48.23 -27.655 1 50.89 ? C4X FAD 803 M 1 HETATM 30 N N5 FAD . . . S 6 16.147 -48.377 -27.657 1 50.89 ? N5 FAD 803 M 1 HETATM 31 C C5X FAD . . . S 6 16.926 -48.276 -26.541 1 50.89 ? C5X FAD 803 M 1 HETATM 32 C C6 FAD . . . S 6 18.283 -48.459 -26.662 1 50.89 ? C6 FAD 803 M 1 HETATM 33 C C7 FAD . . . S 6 19.092 -48.361 -25.514 1 50.89 ? C7 FAD 803 M 1 HETATM 34 C C7M FAD . . . S 6 20.598 -48.62 -25.742 1 50.89 ? C7M FAD 803 M 1 HETATM 35 C C8 FAD . . . S 6 18.526 -48.035 -24.244 1 50.89 ? C8 FAD 803 M 1 HETATM 36 C C8M FAD . . . S 6 19.426 -47.93 -22.99 1 50.89 ? C8M FAD 803 M 1 HETATM 37 C C9 FAD . . . S 6 17.126 -47.833 -24.121 1 50.89 ? C9 FAD 803 M 1 HETATM 38 C C9A FAD . . . S 6 16.295 -47.936 -25.264 1 50.89 ? C9A FAD 803 M 1 HETATM 39 N N10 FAD . . . S 6 14.847 -47.764 -25.273 1 50.89 ? N10 FAD 803 M 1 HETATM 40 C C10 FAD . . . S 6 14.098 -47.937 -26.482 1 50.89 ? C10 FAD 803 M 1 HETATM 41 C C1' FAD . . . S 6 14.143 -47.46 -23.973 1 50.89 ? C1' FAD 803 M 1 HETATM 42 C C2' FAD . . . S 6 13.669 -46.014 -23.781 1 50.89 ? C2' FAD 803 M 1 HETATM 43 O O2' FAD . . . S 6 13.646 -45.322 -25.059 1 50.89 ? O2' FAD 803 M 1 HETATM 44 C C3' FAD . . . S 6 14.571 -45.237 -22.813 1 50.89 ? C3' FAD 803 M 1 HETATM 45 O O3' FAD . . . S 6 14.562 -45.983 -21.612 1 50.89 ? O3' FAD 803 M 1 HETATM 46 C C4' FAD . . . S 6 14.003 -43.785 -22.606 1 50.89 ? C4' FAD 803 M 1 HETATM 47 O O4' FAD . . . S 6 14.28 -43.067 -23.809 1 50.89 ? O4' FAD 803 M 1 HETATM 48 C C5' FAD . . . S 6 14.575 -42.971 -21.408 1 50.89 ? C5' FAD 803 M 1 HETATM 49 O O5' FAD . . . S 6 14.82 -41.588 -21.691 1 50.89 ? O5' FAD 803 M 1 HETATM 50 P P FAD . . . S 6 14.465 -40.426 -20.75 1 50.89 ? P FAD 803 M 1 HETATM 51 O O1P FAD . . . S 6 13.47 -40.902 -19.69 1 50.89 ? O1P FAD 803 M 1 HETATM 52 O O2P FAD . . . S 6 13.811 -39.327 -21.584 1 50.89 ? O2P FAD 803 M 1 HETATM 53 O O3P FAD . . . S 6 15.752 -39.849 -20.057 1 50.89 ? O3P FAD 803 M 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 45 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 53 #