data_1L0V # _model_server_result.job_id slAFN9uTGO3tSEAOsawZLQ _model_server_result.datetime_utc '2024-11-28 14:04:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1l0v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Y","auth_seq_id":812}' # _entry.id 1L0V # _exptl.entry_id 1L0V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 538.755 _entity.id 11 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'O-DODECANYL OCTAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1L0V _cell.length_a 96.59 _cell.length_b 138.09 _cell.length_c 275.25 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1L0V _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 PQS octameric 8 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,I,J,K,L,M,N,O,P,Q 1 1 E,F,G,H,R,S,T,U,V,W,X,Y,Z 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 11 P N N ? 11 Q N N ? 11 X N N ? 11 Y N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NE2 HIS 45 A HIS 44 1_555 J C8M FAD . A FAD 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.82 ? covale ? covale2 E NE2 HIS 45 M HIS 44 1_555 S C8M FAD . M FAD 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? metalc ? metalc1 B SG CYS 57 B CYS 57 1_555 K FE2 FES . B FES 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc2 B SG CYS 62 B CYS 62 1_555 K FE2 FES . B FES 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc3 B SG CYS 65 B CYS 65 1_555 K FE1 FES . B FES 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc4 B SG CYS 77 B CYS 77 1_555 K FE1 FES . B FES 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc5 B SG CYS 148 B CYS 148 1_555 M FE3 SF4 . B SF4 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc6 B SG CYS 151 B CYS 151 1_555 M FE1 SF4 . B SF4 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc7 B SG CYS 154 B CYS 154 1_555 M FE2 SF4 . B SF4 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc8 B SG CYS 158 B CYS 158 1_555 L FE4 F3S . B F3S 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc9 B SG CYS 204 B CYS 204 1_555 L FE1 F3S . B F3S 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc10 B SG CYS 210 B CYS 210 1_555 L FE3 F3S . B F3S 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc11 B SG CYS 214 B CYS 214 1_555 M FE4 SF4 . B SF4 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc12 F SG CYS 57 N CYS 57 1_555 T FE2 FES . N FES 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc13 F SG CYS 62 N CYS 62 1_555 T FE2 FES . N FES 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? metalc ? metalc14 F SG CYS 65 N CYS 65 1_555 T FE1 FES . N FES 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc15 F SG CYS 77 N CYS 77 1_555 T FE1 FES . N FES 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc16 F SG CYS 148 N CYS 148 1_555 V FE3 SF4 . N SF4 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc17 F SG CYS 151 N CYS 151 1_555 V FE1 SF4 . N SF4 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc18 F SG CYS 154 N CYS 154 1_555 V FE2 SF4 . N SF4 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc19 F SG CYS 158 N CYS 158 1_555 U FE4 F3S . N F3S 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc20 F SG CYS 204 N CYS 204 1_555 U FE1 F3S . N F3S 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc21 F SG CYS 210 N CYS 210 1_555 U FE3 F3S . N F3S 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc22 F SG CYS 214 N CYS 214 1_555 V FE4 SF4 . N SF4 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? # _chem_comp.formula 'C28 H58 O9' _chem_comp.formula_weight 538.755 _chem_comp.id CE1 _chem_comp.mon_nstd_flag . _chem_comp.name 'O-DODECANYL OCTAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms THESIT # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CE1 sing 70 n n C1 H11 CE1 sing 71 n n C1 H12 CE1 sing 72 n n C1 H13 CE1 sing 73 n n C2 C3 CE1 sing 74 n n C2 H21 CE1 sing 75 n n C2 H22 CE1 sing 76 n n C3 C4 CE1 sing 77 n n C3 H31 CE1 sing 78 n n C3 H32 CE1 sing 79 n n C4 C5 CE1 sing 80 n n C4 H41 CE1 sing 81 n n C4 H42 CE1 sing 82 n n C5 C6 CE1 sing 83 n n C5 H51 CE1 sing 84 n n C5 H52 CE1 sing 85 n n C6 C7 CE1 sing 86 n n C6 H61 CE1 sing 87 n n C6 H62 CE1 sing 88 n n C7 C8 CE1 sing 89 n n C7 H71 CE1 sing 90 n n C7 H72 CE1 sing 91 n n C8 C9 CE1 sing 92 n n C8 H81 CE1 sing 93 n n C8 H82 CE1 sing 94 n n C9 C10 CE1 sing 95 n n C9 H91 CE1 sing 96 n n C9 H92 CE1 sing 97 n n C10 C11 CE1 sing 98 n n C10 H101 CE1 sing 99 n n C10 H102 CE1 sing 100 n n C11 C12 CE1 sing 101 n n C11 H111 CE1 sing 102 n n C11 H112 CE1 sing 103 n n C12 O13 CE1 sing 104 n n C12 H121 CE1 sing 105 n n C12 H122 CE1 sing 106 n n O13 C14 CE1 sing 107 n n C14 C15 CE1 sing 108 n n C14 H141 CE1 sing 109 n n C14 H142 CE1 sing 110 n n C15 O16 CE1 sing 111 n n C15 H151 CE1 sing 112 n n C15 H152 CE1 sing 113 n n O16 C17 CE1 sing 114 n n C17 C18 CE1 sing 115 n n C17 H171 CE1 sing 116 n n C17 H172 CE1 sing 117 n n C18 O19 CE1 sing 118 n n C18 H181 CE1 sing 119 n n C18 H182 CE1 sing 120 n n O19 C20 CE1 sing 121 n n C20 C21 CE1 sing 122 n n C20 H201 CE1 sing 123 n n C20 H202 CE1 sing 124 n n C21 O22 CE1 sing 125 n n C21 H211 CE1 sing 126 n n C21 H212 CE1 sing 127 n n O22 C23 CE1 sing 128 n n C23 C24 CE1 sing 129 n n C23 H231 CE1 sing 130 n n C23 H232 CE1 sing 131 n n C24 O25 CE1 sing 132 n n C24 H241 CE1 sing 133 n n C24 H242 CE1 sing 134 n n O25 C26 CE1 sing 135 n n C26 C27 CE1 sing 136 n n C26 H261 CE1 sing 137 n n C26 H262 CE1 sing 138 n n C27 O28 CE1 sing 139 n n C27 H271 CE1 sing 140 n n C27 H272 CE1 sing 141 n n O28 C29 CE1 sing 142 n n C29 C30 CE1 sing 143 n n C29 H291 CE1 sing 144 n n C29 H292 CE1 sing 145 n n C30 O31 CE1 sing 146 n n C30 H301 CE1 sing 147 n n C30 H302 CE1 sing 148 n n O31 C32 CE1 sing 149 n n C32 C33 CE1 sing 150 n n C32 H321 CE1 sing 151 n n C32 H322 CE1 sing 152 n n C33 O34 CE1 sing 153 n n C33 H331 CE1 sing 154 n n C33 H332 CE1 sing 155 n n O34 C35 CE1 sing 156 n n C35 C36 CE1 sing 157 n n C35 H351 CE1 sing 158 n n C35 H352 CE1 sing 159 n n C36 O37 CE1 sing 160 n n C36 H361 CE1 sing 161 n n C36 H362 CE1 sing 162 n n O37 H37 CE1 sing 163 n n # _atom_sites.entry_id 1L0V _atom_sites.fract_transf_matrix[1][1] 0.010353 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007242 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003633 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 5 OAA A 1 702 2 OAA OAA . J 6 FAD A 1 703 1 FAD FAD . K 7 FES B 1 244 1 FES FES . L 8 F3S B 1 245 1 F3S F3S . M 9 SF4 B 1 246 1 SF4 FS4 . N 10 MQ7 B 1 701 4 MQ7 MQ7 . O 10 MQ7 D 1 700 3 MQ7 MQ7 . P 11 CE1 D 1 810 5 CE1 CE1 . Q 11 CE1 D 1 710 6 CE1 CE1 . R 5 OAA M 1 802 2 OAA OAA . S 6 FAD M 1 803 1 FAD FAD . T 7 FES N 1 244 1 FES FES . U 8 F3S N 1 245 1 F3S F3S . V 9 SF4 N 1 246 1 SF4 FS4 . W 10 MQ7 N 1 801 4 MQ7 MQ7 . X 11 CE1 O 1 811 7 CE1 CE1 . Y 11 CE1 O 1 812 8 CE1 CE1 . Z 10 MQ7 P 1 800 3 MQ7 MQ7 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CE1 . . . Y 11 49.396 -0.431 -76.55 1 87.01 ? C1 CE1 812 O 1 HETATM 2 C C2 CE1 . . . Y 11 50.626 -0.328 -77.331 1 87.01 ? C2 CE1 812 O 1 HETATM 3 C C3 CE1 . . . Y 11 50.704 -1.45 -78.258 1 87.01 ? C3 CE1 812 O 1 HETATM 4 C C4 CE1 . . . Y 11 51.971 -1.412 -78.98 1 87.01 ? C4 CE1 812 O 1 HETATM 5 C C5 CE1 . . . Y 11 51.781 -1.93 -80.337 1 87.01 ? C5 CE1 812 O 1 HETATM 6 C C6 CE1 . . . Y 11 52.583 -1.167 -81.296 1 87.01 ? C6 CE1 812 O 1 HETATM 7 C C7 CE1 . . . Y 11 51.974 -1.224 -82.626 1 87.01 ? C7 CE1 812 O 1 HETATM 8 C C8 CE1 . . . Y 11 52.815 -0.482 -83.561 1 87.01 ? C8 CE1 812 O 1 HETATM 9 C C9 CE1 . . . Y 11 53.056 -1.3 -84.751 1 87.01 ? C9 CE1 812 O 1 HETATM 10 C C10 CE1 . . . Y 11 54.328 -0.93 -85.376 1 87.01 ? C10 CE1 812 O 1 HETATM 11 C C11 CE1 . . . Y 11 54.565 -1.812 -86.519 1 87.01 ? C11 CE1 812 O 1 HETATM 12 C C12 CE1 . . . Y 11 55.846 -1.458 -87.142 1 87.01 ? C12 CE1 812 O 1 HETATM 13 O O13 CE1 . . . Y 11 56.321 -2.226 -88.278 1 87.01 ? O13 CE1 812 O 1 HETATM 14 C C14 CE1 . . . Y 11 57.12 -3.351 -87.82 1 87.01 ? C14 CE1 812 O 1 HETATM 15 C C15 CE1 . . . Y 11 57.57 -4.413 -88.843 1 87.01 ? C15 CE1 812 O 1 HETATM 16 O O16 CE1 . . . Y 11 56.557 -5.091 -89.646 1 87.01 ? O16 CE1 812 O 1 HETATM 17 C C17 CE1 . . . Y 11 56.719 -4.835 -91.089 1 87.01 ? C17 CE1 812 O 1 HETATM 18 C C18 CE1 . . . Y 11 57.079 -3.41 -91.684 1 87.01 ? C18 CE1 812 O 1 HETATM 19 O O19 CE1 . . . Y 11 57.342 -3.171 -93.133 1 87.01 ? O19 CE1 812 O 1 HETATM 20 C C20 CE1 . . . Y 11 57.88 -4.355 -93.839 1 87.01 ? C20 CE1 812 O 1 HETATM 21 C C21 CE1 . . . Y 11 59.31 -4.904 -93.458 1 87.01 ? C21 CE1 812 O 1 HETATM 22 O O22 CE1 . . . Y 11 59.827 -6.169 -93.919 1 87.01 ? O22 CE1 812 O 1 HETATM 23 C C23 CE1 . . . Y 11 59.104 -7.246 -93.257 1 87.01 ? C23 CE1 812 O 1 HETATM 24 C C24 CE1 . . . Y 11 58.363 -8.317 -94.124 1 87.01 ? C24 CE1 812 O 1 HETATM 25 O O25 CE1 . . . Y 11 58.824 -9.652 -93.929 1 87.01 ? O25 CE1 812 O 1 HETATM 26 C C26 CE1 . . . Y 11 58.566 -10.578 -94.997 1 87.01 ? C26 CE1 812 O 1 HETATM 27 C C27 CE1 . . . Y 11 59.268 -11.934 -94.766 1 87.01 ? C27 CE1 812 O 1 HETATM 28 O O28 CE1 . . . Y 11 59.877 -12.015 -93.447 1 87.01 ? O28 CE1 812 O 1 HETATM 29 C C29 CE1 . . . Y 11 60.843 -13.053 -93.239 1 87.01 ? C29 CE1 812 O 1 HETATM 30 C C30 CE1 . . . Y 11 61.981 -12.709 -92.236 1 87.01 ? C30 CE1 812 O 1 HETATM 31 O O31 CE1 . . . Y 11 61.641 -12.247 -90.872 1 87.01 ? O31 CE1 812 O 1 HETATM 32 C C32 CE1 . . . Y 11 61.445 -13.424 -90.036 1 87.01 ? C32 CE1 812 O 1 HETATM 33 C C33 CE1 . . . Y 11 62.687 -14.339 -89.728 1 87.01 ? C33 CE1 812 O 1 HETATM 34 O O34 CE1 . . . Y 11 62.554 -15.676 -89.156 1 87.01 ? O34 CE1 812 O 1 HETATM 35 C C35 CE1 . . . Y 11 62.76 -16.632 -90.241 1 87.01 ? C35 CE1 812 O 1 HETATM 36 C C36 CE1 . . . Y 11 62.549 -18.185 -90.091 1 87.01 ? C36 CE1 812 O 1 HETATM 37 O O37 CE1 . . . Y 11 62.221 -19.012 -91.272 1 87.01 ? O37 CE1 812 O 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 37 #