data_1L2B # _model_server_result.job_id A_LpuBSDkgKcBradH7op6w _model_server_result.datetime_utc '2024-12-26 15:42:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1l2b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":300}' # _entry.id 1L2B # _exptl.entry_id 1L2B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1L2B _cell.length_a 45.179 _cell.length_b 94.518 _cell.length_c 105.004 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1L2B _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B O3' DC 7 C DC 16 1_555 B P1 AD2 8 C AD2 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.605 ? metalc ? metalc1 D SG CYS 249 A CYS 249 1_555 E ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.542 ? metalc ? metalc2 D SG CYS 252 A CYS 252 1_555 E ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc3 D SG CYS 269 A CYS 269 1_555 E ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? metalc ? metalc4 D SG CYS 272 A CYS 272 1_555 E ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? hydrog WATSON-CRICK hydrog1 A N1 DG 6 B DG 4 1_555 C N3 DC 3 D DC 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N2 DG 6 B DG 4 1_555 C O2 DC 3 D DC 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O6 DG 6 B DG 4 1_555 C N4 DC 3 D DC 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N1 DA 7 B DA 5 1_555 C N3 DT 2 D DT 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N6 DA 7 B DA 5 1_555 C O4 DT 2 D DT 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A N3 DC 8 B DC 6 1_555 C N1 DG 1 D DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N4 DC 8 B DC 6 1_555 C O6 DG 1 D DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A O2 DC 8 B DC 6 1_555 C N2 DG 1 D DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N3 DT 10 B DT 8 1_555 B N1 AD2 8 C AD2 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A O4 DT 10 B DT 8 1_555 B N6 AD2 8 C AD2 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N1 DG 11 B DG 9 1_555 B N3 DC 7 C DC 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N2 DG 11 B DG 9 1_555 B O2 DC 7 C DC 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A O6 DG 11 B DG 9 1_555 B N4 DC 7 C DC 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DG-AD2 MISPAIR' hydrog14 A N2 DG 11 B DG 9 1_555 B N1 AD2 8 C AD2 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DG-DC PAIR' hydrog15 A N2 DG 12 B DG 10 1_555 B N3 DC 6 C DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DA-DT PAIR' hydrog16 A N1 DA 13 B DA 11 1_555 B N3 DT 5 C DT 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DC-DG PAIR' hydrog17 A O2 DC 14 B DC 12 1_555 B N2 DG 4 C DG 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1L2B _atom_sites.fract_transf_matrix[1][1] 0.022134 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01058 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009523 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 ZN A 1 300 300 ZN ZN . F 6 HOH B 1 35 35 HOH HOH . F 6 HOH B 2 64 64 HOH HOH . F 6 HOH B 3 77 77 HOH HOH . F 6 HOH B 4 85 85 HOH HOH . F 6 HOH B 5 98 98 HOH HOH . F 6 HOH B 6 113 113 HOH HOH . F 6 HOH B 7 115 115 HOH HOH . F 6 HOH B 8 122 122 HOH HOH . G 6 HOH C 1 81 81 HOH HOH . G 6 HOH C 2 104 104 HOH HOH . H 6 HOH D 1 26 26 HOH HOH . H 6 HOH D 2 32 32 HOH HOH . H 6 HOH D 3 103 103 HOH HOH . H 6 HOH D 4 112 112 HOH HOH . I 6 HOH A 1 301 1 HOH HOH . I 6 HOH A 2 302 2 HOH HOH . I 6 HOH A 3 303 3 HOH HOH . I 6 HOH A 4 304 4 HOH HOH . I 6 HOH A 5 305 5 HOH HOH . I 6 HOH A 6 306 6 HOH HOH . I 6 HOH A 7 307 7 HOH HOH . I 6 HOH A 8 308 8 HOH HOH . I 6 HOH A 9 309 9 HOH HOH . I 6 HOH A 10 310 10 HOH HOH . I 6 HOH A 11 311 11 HOH HOH . I 6 HOH A 12 312 12 HOH HOH . I 6 HOH A 13 313 13 HOH HOH . I 6 HOH A 14 314 14 HOH HOH . I 6 HOH A 15 315 15 HOH HOH . I 6 HOH A 16 316 16 HOH HOH . I 6 HOH A 17 317 17 HOH HOH . I 6 HOH A 18 318 18 HOH HOH . I 6 HOH A 19 319 19 HOH HOH . I 6 HOH A 20 320 20 HOH HOH . I 6 HOH A 21 321 21 HOH HOH . I 6 HOH A 22 322 22 HOH HOH . I 6 HOH A 23 323 23 HOH HOH . I 6 HOH A 24 324 24 HOH HOH . I 6 HOH A 25 325 25 HOH HOH . I 6 HOH A 26 326 27 HOH HOH . I 6 HOH A 27 327 28 HOH HOH . I 6 HOH A 28 328 29 HOH HOH . I 6 HOH A 29 329 30 HOH HOH . I 6 HOH A 30 330 31 HOH HOH . I 6 HOH A 31 331 33 HOH HOH . I 6 HOH A 32 332 34 HOH HOH . I 6 HOH A 33 333 36 HOH HOH . I 6 HOH A 34 334 37 HOH HOH . I 6 HOH A 35 335 38 HOH HOH . I 6 HOH A 36 336 39 HOH HOH . I 6 HOH A 37 337 40 HOH HOH . I 6 HOH A 38 338 41 HOH HOH . I 6 HOH A 39 339 42 HOH HOH . I 6 HOH A 40 340 43 HOH HOH . I 6 HOH A 41 341 44 HOH HOH . I 6 HOH A 42 342 45 HOH HOH . I 6 HOH A 43 343 46 HOH HOH . I 6 HOH A 44 344 47 HOH HOH . I 6 HOH A 45 345 48 HOH HOH . I 6 HOH A 46 346 49 HOH HOH . I 6 HOH A 47 347 50 HOH HOH . I 6 HOH A 48 348 51 HOH HOH . I 6 HOH A 49 349 52 HOH HOH . I 6 HOH A 50 350 53 HOH HOH . I 6 HOH A 51 351 54 HOH HOH . I 6 HOH A 52 352 55 HOH HOH . I 6 HOH A 53 353 56 HOH HOH . I 6 HOH A 54 354 57 HOH HOH . I 6 HOH A 55 355 58 HOH HOH . I 6 HOH A 56 356 59 HOH HOH . I 6 HOH A 57 357 60 HOH HOH . I 6 HOH A 58 358 61 HOH HOH . I 6 HOH A 59 359 62 HOH HOH . I 6 HOH A 60 360 63 HOH HOH . I 6 HOH A 61 361 66 HOH HOH . I 6 HOH A 62 362 67 HOH HOH . I 6 HOH A 63 363 68 HOH HOH . I 6 HOH A 64 364 69 HOH HOH . I 6 HOH A 65 365 70 HOH HOH . I 6 HOH A 66 366 71 HOH HOH . I 6 HOH A 67 367 72 HOH HOH . I 6 HOH A 68 368 73 HOH HOH . I 6 HOH A 69 369 74 HOH HOH . I 6 HOH A 70 370 75 HOH HOH . I 6 HOH A 71 371 76 HOH HOH . I 6 HOH A 72 372 78 HOH HOH . I 6 HOH A 73 373 79 HOH HOH . I 6 HOH A 74 374 80 HOH HOH . I 6 HOH A 75 375 82 HOH HOH . I 6 HOH A 76 376 83 HOH HOH . I 6 HOH A 77 377 84 HOH HOH . I 6 HOH A 78 378 86 HOH HOH . I 6 HOH A 79 379 87 HOH HOH . I 6 HOH A 80 380 88 HOH HOH . I 6 HOH A 81 381 89 HOH HOH . I 6 HOH A 82 382 90 HOH HOH . I 6 HOH A 83 383 91 HOH HOH . I 6 HOH A 84 384 92 HOH HOH . I 6 HOH A 85 385 93 HOH HOH . I 6 HOH A 86 386 94 HOH HOH . I 6 HOH A 87 387 95 HOH HOH . I 6 HOH A 88 388 96 HOH HOH . I 6 HOH A 89 389 97 HOH HOH . I 6 HOH A 90 390 99 HOH HOH . I 6 HOH A 91 391 100 HOH HOH . I 6 HOH A 92 392 101 HOH HOH . I 6 HOH A 93 393 102 HOH HOH . I 6 HOH A 94 394 105 HOH HOH . I 6 HOH A 95 395 106 HOH HOH . I 6 HOH A 96 396 107 HOH HOH . I 6 HOH A 97 397 108 HOH HOH . I 6 HOH A 98 398 109 HOH HOH . I 6 HOH A 99 399 110 HOH HOH . I 6 HOH A 100 400 111 HOH HOH . I 6 HOH A 101 401 114 HOH HOH . I 6 HOH A 102 402 116 HOH HOH . I 6 HOH A 103 403 117 HOH HOH . I 6 HOH A 104 404 118 HOH HOH . I 6 HOH A 105 405 119 HOH HOH . I 6 HOH A 106 406 120 HOH HOH . I 6 HOH A 107 407 121 HOH HOH . I 6 HOH A 108 408 123 HOH HOH . I 6 HOH A 109 409 124 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 5 _atom_site.Cartn_x -16.407 _atom_site.Cartn_y 31.511 _atom_site.Cartn_z 37.233 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 27.34 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 300 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #