data_1L3P
#
_model_server_result.job_id            a7mIKAeZW43bXuaNmjX9gg 
_model_server_result.datetime_utc      '2024-10-20 00:47:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1l3p 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":252}' 
#
_entry.id    1L3P 
#
_exptl.entry_id    1L3P 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              94.971 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHATE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1L3P 
_cell.length_a            38.975 
_cell.length_b            50.355 
_cell.length_c            107.804 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1L3P 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 38.975 0 53.902 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 56 A CYS 205 1_555 A SG CYS 56 A CYS 205 4_566 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? 
metalc ? metalc1 A OG1 THR 21 A THR 170 1_555 C MG MG . A MG 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.772 ? 
metalc ? metalc2 D O HOH . A HOH 253 1_555 C MG MG . A MG 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.838 ? 
metalc ? metalc3 D O HOH . A HOH 263 3_655 C MG MG . A MG 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.809 ? 
#
_chem_comp.formula           'O4 P -3' 
_chem_comp.formula_weight    94.971 
_chem_comp.id                PO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1 PO4 doub 213 n n 
P O2 PO4 sing 214 n n 
P O3 PO4 sing 215 n n 
P O4 PO4 sing 216 n n 
#
_atom_sites.entry_id                     1L3P 
_atom_sites.fract_transf_matrix[1][1]    0.025657 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019859 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009276 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 PO4 A 1 252 252 PO4 PO4 . 
C 3 MG A 1 350 350 MG MG . 
D 4 HOH A 1 253 253 HOH HOH . 
D 4 HOH A 2 254 254 HOH HOH . 
D 4 HOH A 3 255 255 HOH HOH . 
D 4 HOH A 4 256 256 HOH HOH . 
D 4 HOH A 5 257 257 HOH HOH . 
D 4 HOH A 6 258 258 HOH HOH . 
D 4 HOH A 7 259 259 HOH HOH . 
D 4 HOH A 8 260 260 HOH HOH . 
D 4 HOH A 9 261 261 HOH HOH . 
D 4 HOH A 10 262 262 HOH HOH . 
D 4 HOH A 11 263 263 HOH HOH . 
D 4 HOH A 12 264 264 HOH HOH . 
D 4 HOH A 13 265 265 HOH HOH . 
D 4 HOH A 14 266 266 HOH HOH . 
D 4 HOH A 15 267 267 HOH HOH . 
D 4 HOH A 16 268 268 HOH HOH . 
D 4 HOH A 17 269 269 HOH HOH . 
D 4 HOH A 18 270 270 HOH HOH . 
D 4 HOH A 19 271 271 HOH HOH . 
D 4 HOH A 20 272 272 HOH HOH . 
D 4 HOH A 21 273 273 HOH HOH . 
D 4 HOH A 22 274 274 HOH HOH . 
D 4 HOH A 23 275 275 HOH HOH . 
D 4 HOH A 24 276 276 HOH HOH . 
D 4 HOH A 25 277 277 HOH HOH . 
D 4 HOH A 26 278 278 HOH HOH . 
D 4 HOH A 27 279 279 HOH HOH . 
D 4 HOH A 28 280 280 HOH HOH . 
D 4 HOH A 29 281 281 HOH HOH . 
D 4 HOH A 30 282 282 HOH HOH . 
D 4 HOH A 31 283 283 HOH HOH . 
D 4 HOH A 32 284 284 HOH HOH . 
D 4 HOH A 33 285 285 HOH HOH . 
D 4 HOH A 34 286 286 HOH HOH . 
D 4 HOH A 35 287 287 HOH HOH . 
D 4 HOH A 36 288 288 HOH HOH . 
D 4 HOH A 37 289 289 HOH HOH . 
D 4 HOH A 38 290 290 HOH HOH . 
D 4 HOH A 39 291 291 HOH HOH . 
D 4 HOH A 40 292 292 HOH HOH . 
D 4 HOH A 41 293 293 HOH HOH . 
D 4 HOH A 42 294 294 HOH HOH . 
D 4 HOH A 43 295 295 HOH HOH . 
D 4 HOH A 44 296 296 HOH HOH . 
D 4 HOH A 45 297 297 HOH HOH . 
D 4 HOH A 46 298 298 HOH HOH . 
D 4 HOH A 47 299 299 HOH HOH . 
D 4 HOH A 48 300 300 HOH HOH . 
D 4 HOH A 49 301 301 HOH HOH . 
D 4 HOH A 50 302 302 HOH HOH . 
D 4 HOH A 51 303 303 HOH HOH . 
D 4 HOH A 52 304 304 HOH HOH . 
D 4 HOH A 53 305 305 HOH HOH . 
D 4 HOH A 54 306 306 HOH HOH . 
D 4 HOH A 55 307 307 HOH HOH . 
D 4 HOH A 56 308 308 HOH HOH . 
D 4 HOH A 57 309 309 HOH HOH . 
D 4 HOH A 58 310 310 HOH HOH . 
D 4 HOH A 59 311 311 HOH HOH . 
D 4 HOH A 60 312 312 HOH HOH . 
D 4 HOH A 61 313 313 HOH HOH . 
D 4 HOH A 62 314 314 HOH HOH . 
D 4 HOH A 63 315 315 HOH HOH . 
D 4 HOH A 64 316 316 HOH HOH . 
D 4 HOH A 65 317 317 HOH HOH . 
D 4 HOH A 66 318 318 HOH HOH . 
D 4 HOH A 67 319 319 HOH HOH . 
D 4 HOH A 68 320 320 HOH HOH . 
D 4 HOH A 69 321 321 HOH HOH . 
D 4 HOH A 70 322 322 HOH HOH . 
D 4 HOH A 71 323 323 HOH HOH . 
D 4 HOH A 72 324 324 HOH HOH . 
D 4 HOH A 73 325 325 HOH HOH . 
D 4 HOH A 74 326 326 HOH HOH . 
D 4 HOH A 75 327 327 HOH HOH . 
D 4 HOH A 76 328 328 HOH HOH . 
D 4 HOH A 77 329 329 HOH HOH . 
D 4 HOH A 78 330 330 HOH HOH . 
D 4 HOH A 79 331 331 HOH HOH . 
D 4 HOH A 80 332 332 HOH HOH . 
D 4 HOH A 81 333 333 HOH HOH . 
D 4 HOH A 82 334 334 HOH HOH . 
D 4 HOH A 83 335 335 HOH HOH . 
D 4 HOH A 84 336 336 HOH HOH . 
D 4 HOH A 85 337 337 HOH HOH . 
D 4 HOH A 86 338 338 HOH HOH . 
D 4 HOH A 87 339 339 HOH HOH . 
D 4 HOH A 88 340 340 HOH HOH . 
D 4 HOH A 89 341 341 HOH HOH . 
D 4 HOH A 90 342 342 HOH HOH . 
D 4 HOH A 91 343 343 HOH HOH . 
D 4 HOH A 92 344 344 HOH HOH . 
D 4 HOH A 93 345 345 HOH HOH . 
D 4 HOH A 94 346 346 HOH HOH . 
D 4 HOH A 95 347 347 HOH HOH . 
D 4 HOH A 96 348 348 HOH HOH . 
D 4 HOH A 97 349 349 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P PO4 . . . B 2 15.399 29.691 27.791 0.6 23.2 ? P PO4 252 A 1 
HETATM 2 O O1 PO4 . . . B 2 16.414 30.543 28.455 0.6 22.75 ? O1 PO4 252 A 1 
HETATM 3 O O2 PO4 . . . B 2 14.259 29.461 28.719 0.6 20.91 ? O2 PO4 252 A 1 
HETATM 4 O O3 PO4 . . . B 2 14.908 30.368 26.567 0.6 19.13 ? O3 PO4 252 A 1 
HETATM 5 O O4 PO4 . . . B 2 16.015 28.389 27.424 0.6 21.73 ? O4 PO4 252 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           277 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           5 
#