data_1L4L
#
_model_server_result.job_id            bIzIhuE8dzHYbPLMHAiHXA 
_model_server_result.datetime_utc      '2024-10-12 23:25:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1l4l 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":990}' 
#
_entry.id    1L4L 
#
_exptl.entry_id    1L4L 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              121.18 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2,5-DIMETHYLANILINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1L4L 
_cell.length_a            71.77 
_cell.length_b            90 
_cell.length_c            47.58 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1L4L 
_symmetry.cell_setting             orthorhombic 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 71.77 90 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             160 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              160 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            A 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             256 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              256 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.028 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C8 H11 N' 
_chem_comp.formula_weight    121.18 
_chem_comp.id                XYD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2,5-DIMETHYLANILINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     2,5-XYLIDINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 XYD doub 413 n y 
C1 C6 XYD sing 414 n y 
C1 N XYD sing 415 n n 
C2 C3 XYD sing 416 n y 
C2 C9 XYD sing 417 n n 
C3 C4 XYD doub 418 n y 
C3 H3 XYD sing 419 n n 
C4 C5 XYD sing 420 n y 
C4 H4 XYD sing 421 n n 
C5 C6 XYD doub 422 n y 
C5 C8 XYD sing 423 n n 
C6 H6 XYD sing 424 n n 
N H1N XYD sing 425 n n 
N H2N XYD sing 426 n n 
C8 H81 XYD sing 427 n n 
C8 H82 XYD sing 428 n n 
C8 H83 XYD sing 429 n n 
C9 H91 XYD sing 430 n n 
C9 H92 XYD sing 431 n n 
C9 H93 XYD sing 432 n n 
#
_atom_sites.entry_id                     1L4L 
_atom_sites.fract_transf_matrix[1][1]    0.013933 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011111 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.021017 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 XYD A 1 990 990 XYD XYD . 
C 3 NCN A 1 991 991 NCN NCN . 
D 4 HOH A 1 1001 1001 HOH HOH . 
D 4 HOH A 2 1002 1002 HOH HOH . 
D 4 HOH A 3 1003 1003 HOH HOH . 
D 4 HOH A 4 1004 1004 HOH HOH . 
D 4 HOH A 5 1005 1005 HOH HOH . 
D 4 HOH A 6 1006 1006 HOH HOH . 
D 4 HOH A 7 1007 1007 HOH HOH . 
D 4 HOH A 8 1008 1008 HOH HOH . 
D 4 HOH A 9 1009 1009 HOH HOH . 
D 4 HOH A 10 1010 1010 HOH HOH . 
D 4 HOH A 11 1011 1011 HOH HOH . 
D 4 HOH A 12 1012 1012 HOH HOH . 
D 4 HOH A 13 1013 1013 HOH HOH . 
D 4 HOH A 14 1014 1014 HOH HOH . 
D 4 HOH A 15 1015 1015 HOH HOH . 
D 4 HOH A 16 1016 1016 HOH HOH . 
D 4 HOH A 17 1017 1017 HOH HOH . 
D 4 HOH A 18 1018 1018 HOH HOH . 
D 4 HOH A 19 1019 1019 HOH HOH . 
D 4 HOH A 20 1020 1020 HOH HOH . 
D 4 HOH A 21 1021 1021 HOH HOH . 
D 4 HOH A 22 1022 1022 HOH HOH . 
D 4 HOH A 23 1023 1023 HOH HOH . 
D 4 HOH A 24 1024 1024 HOH HOH . 
D 4 HOH A 25 1025 1025 HOH HOH . 
D 4 HOH A 26 1026 1026 HOH HOH . 
D 4 HOH A 27 1027 1027 HOH HOH . 
D 4 HOH A 28 1028 1028 HOH HOH . 
D 4 HOH A 29 1029 1029 HOH HOH . 
D 4 HOH A 30 1030 1030 HOH HOH . 
D 4 HOH A 31 1031 1031 HOH HOH . 
D 4 HOH A 32 1032 1032 HOH HOH . 
D 4 HOH A 33 1033 1033 HOH HOH . 
D 4 HOH A 34 1034 1034 HOH HOH . 
D 4 HOH A 35 1035 1035 HOH HOH . 
D 4 HOH A 36 1037 1037 HOH HOH . 
D 4 HOH A 37 1038 1038 HOH HOH . 
D 4 HOH A 38 1039 1039 HOH HOH . 
D 4 HOH A 39 1040 1040 HOH HOH . 
D 4 HOH A 40 1041 1041 HOH HOH . 
D 4 HOH A 41 1042 1042 HOH HOH . 
D 4 HOH A 42 1043 1043 HOH HOH . 
D 4 HOH A 43 1044 1044 HOH HOH . 
D 4 HOH A 44 1046 1046 HOH HOH . 
D 4 HOH A 45 1047 1047 HOH HOH . 
D 4 HOH A 46 1048 1048 HOH HOH . 
D 4 HOH A 47 1049 1049 HOH HOH . 
D 4 HOH A 48 1050 1050 HOH HOH . 
D 4 HOH A 49 1051 1051 HOH HOH . 
D 4 HOH A 50 1052 1052 HOH HOH . 
D 4 HOH A 51 1053 1053 HOH HOH . 
D 4 HOH A 52 1054 1054 HOH HOH . 
D 4 HOH A 53 1055 1055 HOH HOH . 
D 4 HOH A 54 1056 1056 HOH HOH . 
D 4 HOH A 55 1057 1057 HOH HOH . 
D 4 HOH A 56 1058 1058 HOH HOH . 
D 4 HOH A 57 1059 1059 HOH HOH . 
D 4 HOH A 58 1060 1060 HOH HOH . 
D 4 HOH A 59 1061 1061 HOH HOH . 
D 4 HOH A 60 1062 1062 HOH HOH . 
D 4 HOH A 61 1063 1063 HOH HOH . 
D 4 HOH A 62 1064 1064 HOH HOH . 
D 4 HOH A 63 1065 1065 HOH HOH . 
D 4 HOH A 64 1067 1067 HOH HOH . 
D 4 HOH A 65 1068 1068 HOH HOH . 
D 4 HOH A 66 1069 1069 HOH HOH . 
D 4 HOH A 67 1070 1070 HOH HOH . 
D 4 HOH A 68 1071 1071 HOH HOH . 
D 4 HOH A 69 1072 1072 HOH HOH . 
D 4 HOH A 70 1073 1073 HOH HOH . 
D 4 HOH A 71 1074 1074 HOH HOH . 
D 4 HOH A 72 1075 1075 HOH HOH . 
D 4 HOH A 73 1076 1076 HOH HOH . 
D 4 HOH A 74 1077 1077 HOH HOH . 
D 4 HOH A 75 1078 1078 HOH HOH . 
D 4 HOH A 76 1079 1079 HOH HOH . 
D 4 HOH A 77 1080 1080 HOH HOH . 
D 4 HOH A 78 1081 1081 HOH HOH . 
D 4 HOH A 79 1082 1082 HOH HOH . 
D 4 HOH A 80 1083 1083 HOH HOH . 
D 4 HOH A 81 1084 1084 HOH HOH . 
D 4 HOH A 82 1085 1085 HOH HOH . 
D 4 HOH A 83 1086 1086 HOH HOH . 
D 4 HOH A 84 1088 1088 HOH HOH . 
D 4 HOH A 85 1089 1089 HOH HOH . 
D 4 HOH A 86 1090 1090 HOH HOH . 
D 4 HOH A 87 1091 1091 HOH HOH . 
D 4 HOH A 88 1092 1092 HOH HOH . 
D 4 HOH A 89 1093 1093 HOH HOH . 
D 4 HOH A 90 1094 1094 HOH HOH . 
D 4 HOH A 91 1097 1097 HOH HOH . 
D 4 HOH A 92 1099 1099 HOH HOH . 
D 4 HOH A 93 1100 1100 HOH HOH . 
D 4 HOH A 94 1101 1101 HOH HOH . 
D 4 HOH A 95 1104 1104 HOH HOH . 
D 4 HOH A 96 1105 1105 HOH HOH . 
D 4 HOH A 97 1106 1106 HOH HOH . 
D 4 HOH A 98 1107 1107 HOH HOH . 
D 4 HOH A 99 1108 1108 HOH HOH . 
D 4 HOH A 100 1109 1109 HOH HOH . 
D 4 HOH A 101 1110 1110 HOH HOH . 
D 4 HOH A 102 1111 1111 HOH HOH . 
D 4 HOH A 103 1112 1112 HOH HOH . 
D 4 HOH A 104 1113 1113 HOH HOH . 
D 4 HOH A 105 1114 1114 HOH HOH . 
D 4 HOH A 106 1115 1115 HOH HOH . 
D 4 HOH A 107 1116 1116 HOH HOH . 
D 4 HOH A 108 1118 1118 HOH HOH . 
D 4 HOH A 109 1119 1119 HOH HOH . 
D 4 HOH A 110 1122 1122 HOH HOH . 
D 4 HOH A 111 1123 1123 HOH HOH . 
D 4 HOH A 112 1124 1124 HOH HOH . 
D 4 HOH A 113 1125 1125 HOH HOH . 
D 4 HOH A 114 1127 1127 HOH HOH . 
D 4 HOH A 115 1128 1128 HOH HOH . 
D 4 HOH A 116 1129 1129 HOH HOH . 
D 4 HOH A 117 1130 1130 HOH HOH . 
D 4 HOH A 118 1132 1132 HOH HOH . 
D 4 HOH A 119 1133 1133 HOH HOH . 
D 4 HOH A 120 1136 1136 HOH HOH . 
D 4 HOH A 121 1137 1137 HOH HOH . 
D 4 HOH A 122 1138 1138 HOH HOH . 
D 4 HOH A 123 1141 1141 HOH HOH . 
D 4 HOH A 124 1200 1200 HOH HOH . 
D 4 HOH A 125 1201 1201 HOH HOH . 
D 4 HOH A 126 1202 1202 HOH HOH . 
D 4 HOH A 127 1203 1203 HOH HOH . 
D 4 HOH A 128 1204 1204 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 XYD . . . B 2 57.8 42.369 13.652 1 39.38 ? C1 XYD 990 A 1 
HETATM 2 C C2 XYD . . . B 2 58.405 42.189 12.394 1 45.95 ? C2 XYD 990 A 1 
HETATM 3 C C3 XYD . . . B 2 59.473 42.915 12.042 1 30.65 ? C3 XYD 990 A 1 
HETATM 4 C C4 XYD . . . B 2 59.978 43.841 12.902 1 44.97 ? C4 XYD 990 A 1 
HETATM 5 C C5 XYD . . . B 2 59.379 44.014 14.145 1 51.15 ? C5 XYD 990 A 1 
HETATM 6 C C6 XYD . . . B 2 58.291 43.268 14.499 1 26.92 ? C6 XYD 990 A 1 
HETATM 7 N N XYD . . . B 2 56.652 41.583 14.059 1 46.75 ? N XYD 990 A 1 
HETATM 8 C C8 XYD . . . B 2 59.929 45.031 15.096 1 30.91 ? C8 XYD 990 A 1 
HETATM 9 C C9 XYD . . . B 2 57.862 41.176 11.425 1 71.28 ? C9 XYD 990 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           275 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           9 
#