data_1L61 # _model_server_result.job_id z5ZcpreCVVJVrndczlc3Yg _model_server_result.datetime_utc '2024-11-25 15:19:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1l61 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":900}' # _entry.id 1L61 # _exptl.entry_id 1L61 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-MERCAPTOETHANOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1L61 _cell.length_a 61 _cell.length_b 61 _cell.length_c 97.1 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1L61 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id D _struct_conn.ptnr1_label_atom_id S2 _struct_conn.ptnr1_label_comp_id BME _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id BME _struct_conn.ptnr1_auth_seq_id 900 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id D _struct_conn.ptnr2_label_atom_id S2 _struct_conn.ptnr2_label_comp_id BME _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id BME _struct_conn.ptnr2_auth_seq_id 900 _struct_conn.ptnr2_symmetry 5_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.001 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id BME _chem_comp.mon_nstd_flag . _chem_comp.name BETA-MERCAPTOETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BME sing 70 n n C1 O1 BME sing 71 n n C1 H11 BME sing 72 n n C1 H12 BME sing 73 n n C2 S2 BME sing 74 n n C2 H21 BME sing 75 n n C2 H22 BME sing 76 n n O1 HO1 BME sing 77 n n S2 HS2 BME sing 78 n n # _atom_sites.entry_id 1L61 _atom_sites.fract_transf_matrix[1][1] 0.016393 _atom_sites.fract_transf_matrix[1][2] 0.009465 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01893 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010299 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 173 173 CL CL . C 2 CL A 1 178 178 CL CL . D 3 BME A 1 900 900 BME SEO . E 4 HOH A 1 171 171 HOH HOH . E 4 HOH A 2 172 172 HOH HOH . E 4 HOH A 3 174 174 HOH HOH . E 4 HOH A 4 175 175 HOH HOH . E 4 HOH A 5 177 177 HOH HOH . E 4 HOH A 6 179 179 HOH HOH . E 4 HOH A 7 180 180 HOH HOH . E 4 HOH A 8 181 181 HOH HOH . E 4 HOH A 9 182 182 HOH HOH . E 4 HOH A 10 183 183 HOH HOH . E 4 HOH A 11 184 184 HOH HOH . E 4 HOH A 12 185 185 HOH HOH . E 4 HOH A 13 186 186 HOH HOH . E 4 HOH A 14 187 187 HOH HOH . E 4 HOH A 15 188 188 HOH HOH . E 4 HOH A 16 189 189 HOH HOH . E 4 HOH A 17 190 190 HOH HOH . E 4 HOH A 18 191 191 HOH HOH . E 4 HOH A 19 192 192 HOH HOH . E 4 HOH A 20 193 193 HOH HOH . E 4 HOH A 21 194 194 HOH HOH . E 4 HOH A 22 195 195 HOH HOH . E 4 HOH A 23 196 196 HOH HOH . E 4 HOH A 24 197 197 HOH HOH . E 4 HOH A 25 198 198 HOH HOH . E 4 HOH A 26 200 200 HOH HOH . E 4 HOH A 27 201 201 HOH HOH . E 4 HOH A 28 202 202 HOH HOH . E 4 HOH A 29 203 203 HOH HOH . E 4 HOH A 30 204 204 HOH HOH . E 4 HOH A 31 206 206 HOH HOH . E 4 HOH A 32 207 207 HOH HOH . E 4 HOH A 33 208 208 HOH HOH . E 4 HOH A 34 209 209 HOH HOH . E 4 HOH A 35 210 210 HOH HOH . E 4 HOH A 36 211 211 HOH HOH . E 4 HOH A 37 212 212 HOH HOH . E 4 HOH A 38 213 213 HOH HOH . E 4 HOH A 39 214 214 HOH HOH . E 4 HOH A 40 215 215 HOH HOH . E 4 HOH A 41 216 216 HOH HOH . E 4 HOH A 42 217 217 HOH HOH . E 4 HOH A 43 218 218 HOH HOH . E 4 HOH A 44 219 219 HOH HOH . E 4 HOH A 45 220 220 HOH HOH . E 4 HOH A 46 221 221 HOH HOH . E 4 HOH A 47 222 222 HOH HOH . E 4 HOH A 48 223 223 HOH HOH . E 4 HOH A 49 224 224 HOH HOH . E 4 HOH A 50 225 225 HOH HOH . E 4 HOH A 51 226 226 HOH HOH . E 4 HOH A 52 227 227 HOH HOH . E 4 HOH A 53 228 228 HOH HOH . E 4 HOH A 54 229 229 HOH HOH . E 4 HOH A 55 230 230 HOH HOH . E 4 HOH A 56 231 231 HOH HOH . E 4 HOH A 57 232 232 HOH HOH . E 4 HOH A 58 233 233 HOH HOH . E 4 HOH A 59 234 234 HOH HOH . E 4 HOH A 60 235 235 HOH HOH . E 4 HOH A 61 236 236 HOH HOH . E 4 HOH A 62 237 237 HOH HOH . E 4 HOH A 63 238 238 HOH HOH . E 4 HOH A 64 239 239 HOH HOH . E 4 HOH A 65 240 240 HOH HOH . E 4 HOH A 66 242 242 HOH HOH . E 4 HOH A 67 244 244 HOH HOH . E 4 HOH A 68 245 245 HOH HOH . E 4 HOH A 69 246 246 HOH HOH . E 4 HOH A 70 247 247 HOH HOH . E 4 HOH A 71 248 248 HOH HOH . E 4 HOH A 72 249 249 HOH HOH . E 4 HOH A 73 250 250 HOH HOH . E 4 HOH A 74 251 251 HOH HOH . E 4 HOH A 75 253 253 HOH HOH . E 4 HOH A 76 254 254 HOH HOH . E 4 HOH A 77 256 256 HOH HOH . E 4 HOH A 78 257 257 HOH HOH . E 4 HOH A 79 258 258 HOH HOH . E 4 HOH A 80 259 259 HOH HOH . E 4 HOH A 81 260 260 HOH HOH . E 4 HOH A 82 261 261 HOH HOH . E 4 HOH A 83 263 263 HOH HOH . E 4 HOH A 84 265 265 HOH HOH . E 4 HOH A 85 266 266 HOH HOH . E 4 HOH A 86 267 267 HOH HOH . E 4 HOH A 87 268 268 HOH HOH . E 4 HOH A 88 269 269 HOH HOH . E 4 HOH A 89 270 270 HOH HOH . E 4 HOH A 90 271 271 HOH HOH . E 4 HOH A 91 272 272 HOH HOH . E 4 HOH A 92 273 273 HOH HOH . E 4 HOH A 93 274 274 HOH HOH . E 4 HOH A 94 275 275 HOH HOH . E 4 HOH A 95 276 276 HOH HOH . E 4 HOH A 96 277 277 HOH HOH . E 4 HOH A 97 278 278 HOH HOH . E 4 HOH A 98 279 279 HOH HOH . E 4 HOH A 99 280 280 HOH HOH . E 4 HOH A 100 281 281 HOH HOH . E 4 HOH A 101 282 282 HOH HOH . E 4 HOH A 102 283 283 HOH HOH . E 4 HOH A 103 284 284 HOH HOH . E 4 HOH A 104 285 285 HOH HOH . E 4 HOH A 105 286 286 HOH HOH . E 4 HOH A 106 288 288 HOH HOH . E 4 HOH A 107 289 289 HOH HOH . E 4 HOH A 108 290 290 HOH HOH . E 4 HOH A 109 291 291 HOH HOH . E 4 HOH A 110 292 292 HOH HOH . E 4 HOH A 111 293 293 HOH HOH . E 4 HOH A 112 294 294 HOH HOH . E 4 HOH A 113 295 295 HOH HOH . E 4 HOH A 114 296 296 HOH HOH . E 4 HOH A 115 297 297 HOH HOH . E 4 HOH A 116 298 298 HOH HOH . E 4 HOH A 117 299 299 HOH HOH . E 4 HOH A 118 300 300 HOH HOH . E 4 HOH A 119 301 301 HOH HOH . E 4 HOH A 120 302 302 HOH HOH . E 4 HOH A 121 303 303 HOH HOH . E 4 HOH A 122 304 304 HOH HOH . E 4 HOH A 123 305 305 HOH HOH . E 4 HOH A 124 306 306 HOH HOH . E 4 HOH A 125 307 307 HOH HOH . E 4 HOH A 126 308 308 HOH HOH . E 4 HOH A 127 309 309 HOH HOH . E 4 HOH A 128 311 311 HOH HOH . E 4 HOH A 129 312 312 HOH HOH . E 4 HOH A 130 313 313 HOH HOH . E 4 HOH A 131 314 314 HOH HOH . E 4 HOH A 132 316 316 HOH HOH . E 4 HOH A 133 317 317 HOH HOH . E 4 HOH A 134 318 318 HOH HOH . E 4 HOH A 135 319 319 HOH HOH . E 4 HOH A 136 320 320 HOH HOH . E 4 HOH A 137 321 321 HOH HOH . E 4 HOH A 138 501 501 HOH HOH . E 4 HOH A 139 502 502 HOH HOH . E 4 HOH A 140 503 503 HOH HOH . E 4 HOH A 141 504 504 HOH HOH . E 4 HOH A 142 505 505 HOH HOH . E 4 HOH A 143 506 506 HOH HOH . E 4 HOH A 144 507 507 HOH HOH . E 4 HOH A 145 508 508 HOH HOH . E 4 HOH A 146 509 509 HOH HOH . E 4 HOH A 147 510 510 HOH HOH . E 4 HOH A 148 511 511 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BME . . . D 3 32.146 -0.831 13.269 1 52.52 ? C1 BME 900 A 1 HETATM 2 C C2 BME . . . D 3 31.782 -1.239 14.706 1 20.36 ? C2 BME 900 A 1 HETATM 3 O O1 BME . . . D 3 33.528 -1.061 13.048 1 44.55 ? O1 BME 900 A 1 HETATM 4 S S2 BME . . . D 3 33.166 -0.939 15.838 1 56.71 ? S2 BME 900 A 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #