data_1L7P # _model_server_result.job_id sd8SbtOSew1nD3NFq66Fyg _model_server_result.datetime_utc '2024-11-28 16:46:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1l7p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":270}' # _entry.id 1L7P # _exptl.entry_id 1L7P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 185.072 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHOSPHOSERINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1L7P _cell.length_a 70.799 _cell.length_b 70.428 _cell.length_c 90.045 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1L7P _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,G 1 1 B,D,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 42 A ALA 42 1_555 A N MSE 43 A MSE 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C MSE 43 A MSE 43 1_555 A N GLU 44 A GLU 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale3 A C SER 173 A SER 173 1_555 A N MSE 174 A MSE 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 A C MSE 174 A MSE 174 1_555 A N PHE 175 A PHE 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale5 B C ALA 42 B ALA 542 1_555 B N MSE 43 B MSE 543 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale6 B C MSE 43 B MSE 543 1_555 B N GLU 44 B GLU 544 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale7 B C SER 173 B SER 673 1_555 B N MSE 174 B MSE 674 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale8 B C MSE 174 B MSE 674 1_555 B N PHE 175 B PHE 675 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? # _chem_comp.formula 'C3 H8 N O6 P' _chem_comp.formula_weight 185.072 _chem_comp.id SEP _chem_comp.mon_nstd_flag n _chem_comp.name PHOSPHOSERINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms PHOSPHONOSERINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA SEP sing 279 n n N H SEP sing 280 n n N H2 SEP sing 281 n n CA CB SEP sing 282 n n CA C SEP sing 283 n n CA HA SEP sing 284 n n CB OG SEP sing 285 n n CB HB2 SEP sing 286 n n CB HB3 SEP sing 287 n n OG P SEP sing 288 n n C O SEP doub 289 n n C OXT SEP sing 290 n n OXT HXT SEP sing 291 n n P O1P SEP doub 292 n n P O2P SEP sing 293 n n P O3P SEP sing 294 n n O2P HOP2 SEP sing 295 n n O3P HOP3 SEP sing 296 n n # _atom_sites.entry_id 1L7P _atom_sites.fract_transf_matrix[1][1] 0.014124 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014199 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011106 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SEP A 1 770 770 SEP PLS . D 3 PO4 B 1 230 230 PO4 PO4 . E 3 PO4 B 1 240 240 PO4 PO4 . F 2 SEP B 1 270 270 SEP PLS . G 4 HOH A 1 801 801 HOH HOH . G 4 HOH A 2 803 803 HOH HOH . G 4 HOH A 3 804 804 HOH HOH . G 4 HOH A 4 807 807 HOH HOH . G 4 HOH A 5 808 808 HOH HOH . G 4 HOH A 6 809 809 HOH HOH . G 4 HOH A 7 811 811 HOH HOH . G 4 HOH A 8 812 812 HOH HOH . G 4 HOH A 9 813 813 HOH HOH . G 4 HOH A 10 815 815 HOH HOH . G 4 HOH A 11 817 817 HOH HOH . G 4 HOH A 12 818 818 HOH HOH . G 4 HOH A 13 821 821 HOH HOH . G 4 HOH A 14 823 823 HOH HOH . G 4 HOH A 15 825 825 HOH HOH . G 4 HOH A 16 826 826 HOH HOH . G 4 HOH A 17 827 827 HOH HOH . G 4 HOH A 18 829 829 HOH HOH . G 4 HOH A 19 830 830 HOH HOH . G 4 HOH A 20 832 832 HOH HOH . G 4 HOH A 21 834 834 HOH HOH . G 4 HOH A 22 836 836 HOH HOH . G 4 HOH A 23 837 837 HOH HOH . G 4 HOH A 24 841 841 HOH HOH . G 4 HOH A 25 844 844 HOH HOH . G 4 HOH A 26 849 849 HOH HOH . G 4 HOH A 27 850 850 HOH HOH . G 4 HOH A 28 855 855 HOH HOH . G 4 HOH A 29 858 858 HOH HOH . G 4 HOH A 30 859 859 HOH HOH . G 4 HOH A 31 861 861 HOH HOH . G 4 HOH A 32 862 862 HOH HOH . G 4 HOH A 33 863 863 HOH HOH . G 4 HOH A 34 864 864 HOH HOH . G 4 HOH A 35 865 865 HOH HOH . G 4 HOH A 36 867 867 HOH HOH . G 4 HOH A 37 869 869 HOH HOH . G 4 HOH A 38 871 871 HOH HOH . G 4 HOH A 39 872 872 HOH HOH . G 4 HOH A 40 873 873 HOH HOH . G 4 HOH A 41 874 874 HOH HOH . G 4 HOH A 42 880 880 HOH HOH . G 4 HOH A 43 881 881 HOH HOH . G 4 HOH A 44 884 884 HOH HOH . G 4 HOH A 45 887 887 HOH HOH . G 4 HOH A 46 889 889 HOH HOH . G 4 HOH A 47 890 890 HOH HOH . G 4 HOH A 48 891 891 HOH HOH . G 4 HOH A 49 892 892 HOH HOH . G 4 HOH A 50 893 893 HOH HOH . G 4 HOH A 51 895 895 HOH HOH . G 4 HOH A 52 896 896 HOH HOH . G 4 HOH A 53 897 897 HOH HOH . G 4 HOH A 54 900 900 HOH HOH . G 4 HOH A 55 901 901 HOH HOH . G 4 HOH A 56 902 902 HOH HOH . G 4 HOH A 57 904 904 HOH HOH . G 4 HOH A 58 907 907 HOH HOH . G 4 HOH A 59 909 909 HOH HOH . G 4 HOH A 60 912 912 HOH HOH . G 4 HOH A 61 913 913 HOH HOH . G 4 HOH A 62 914 914 HOH HOH . G 4 HOH A 63 915 915 HOH HOH . G 4 HOH A 64 916 916 HOH HOH . G 4 HOH A 65 917 917 HOH HOH . G 4 HOH A 66 919 919 HOH HOH . G 4 HOH A 67 926 926 HOH HOH . G 4 HOH A 68 928 928 HOH HOH . G 4 HOH A 69 931 931 HOH HOH . G 4 HOH A 70 932 932 HOH HOH . G 4 HOH A 71 934 934 HOH HOH . G 4 HOH A 72 937 937 HOH HOH . G 4 HOH A 73 939 939 HOH HOH . G 4 HOH A 74 940 940 HOH HOH . G 4 HOH A 75 941 941 HOH HOH . G 4 HOH A 76 942 942 HOH HOH . G 4 HOH A 77 948 948 HOH HOH . G 4 HOH A 78 949 949 HOH HOH . G 4 HOH A 79 950 950 HOH HOH . G 4 HOH A 80 952 952 HOH HOH . G 4 HOH A 81 955 955 HOH HOH . G 4 HOH A 82 962 962 HOH HOH . G 4 HOH A 83 970 970 HOH HOH . G 4 HOH A 84 971 971 HOH HOH . G 4 HOH A 85 972 972 HOH HOH . G 4 HOH A 86 973 973 HOH HOH . G 4 HOH A 87 975 975 HOH HOH . G 4 HOH A 88 977 977 HOH HOH . G 4 HOH A 89 978 978 HOH HOH . G 4 HOH A 90 983 983 HOH HOH . G 4 HOH A 91 985 985 HOH HOH . G 4 HOH A 92 986 986 HOH HOH . G 4 HOH A 93 988 988 HOH HOH . G 4 HOH A 94 989 989 HOH HOH . G 4 HOH A 95 991 991 HOH HOH . G 4 HOH A 96 992 992 HOH HOH . G 4 HOH A 97 993 993 HOH HOH . G 4 HOH A 98 994 994 HOH HOH . G 4 HOH A 99 995 995 HOH HOH . G 4 HOH A 100 996 996 HOH HOH . H 4 HOH B 1 802 802 HOH HOH . H 4 HOH B 2 805 805 HOH HOH . H 4 HOH B 3 806 806 HOH HOH . H 4 HOH B 4 814 814 HOH HOH . H 4 HOH B 5 816 816 HOH HOH . H 4 HOH B 6 819 819 HOH HOH . H 4 HOH B 7 820 820 HOH HOH . H 4 HOH B 8 822 822 HOH HOH . H 4 HOH B 9 824 824 HOH HOH . H 4 HOH B 10 828 828 HOH HOH . H 4 HOH B 11 831 831 HOH HOH . H 4 HOH B 12 833 833 HOH HOH . H 4 HOH B 13 835 835 HOH HOH . H 4 HOH B 14 838 838 HOH HOH . H 4 HOH B 15 839 839 HOH HOH . H 4 HOH B 16 840 840 HOH HOH . H 4 HOH B 17 842 842 HOH HOH . H 4 HOH B 18 843 843 HOH HOH . H 4 HOH B 19 845 845 HOH HOH . H 4 HOH B 20 846 846 HOH HOH . H 4 HOH B 21 847 847 HOH HOH . H 4 HOH B 22 848 848 HOH HOH . H 4 HOH B 23 851 851 HOH HOH . H 4 HOH B 24 852 852 HOH HOH . H 4 HOH B 25 853 853 HOH HOH . H 4 HOH B 26 854 854 HOH HOH . H 4 HOH B 27 856 856 HOH HOH . H 4 HOH B 28 857 857 HOH HOH . H 4 HOH B 29 860 860 HOH HOH . H 4 HOH B 30 866 866 HOH HOH . H 4 HOH B 31 868 868 HOH HOH . H 4 HOH B 32 870 870 HOH HOH . H 4 HOH B 33 875 875 HOH HOH . H 4 HOH B 34 876 876 HOH HOH . H 4 HOH B 35 877 877 HOH HOH . H 4 HOH B 36 878 878 HOH HOH . H 4 HOH B 37 879 879 HOH HOH . H 4 HOH B 38 882 882 HOH HOH . H 4 HOH B 39 883 883 HOH HOH . H 4 HOH B 40 885 885 HOH HOH . H 4 HOH B 41 886 886 HOH HOH . H 4 HOH B 42 888 888 HOH HOH . H 4 HOH B 43 894 894 HOH HOH . H 4 HOH B 44 898 898 HOH HOH . H 4 HOH B 45 899 899 HOH HOH . H 4 HOH B 46 903 903 HOH HOH . H 4 HOH B 47 905 905 HOH HOH . H 4 HOH B 48 906 906 HOH HOH . H 4 HOH B 49 908 908 HOH HOH . H 4 HOH B 50 910 910 HOH HOH . H 4 HOH B 51 911 911 HOH HOH . H 4 HOH B 52 918 918 HOH HOH . H 4 HOH B 53 920 920 HOH HOH . H 4 HOH B 54 921 921 HOH HOH . H 4 HOH B 55 922 922 HOH HOH . H 4 HOH B 56 923 923 HOH HOH . H 4 HOH B 57 924 924 HOH HOH . H 4 HOH B 58 925 925 HOH HOH . H 4 HOH B 59 927 927 HOH HOH . H 4 HOH B 60 929 929 HOH HOH . H 4 HOH B 61 930 930 HOH HOH . H 4 HOH B 62 933 933 HOH HOH . H 4 HOH B 63 935 935 HOH HOH . H 4 HOH B 64 936 936 HOH HOH . H 4 HOH B 65 938 938 HOH HOH . H 4 HOH B 66 944 944 HOH HOH . H 4 HOH B 67 945 945 HOH HOH . H 4 HOH B 68 946 946 HOH HOH . H 4 HOH B 69 947 947 HOH HOH . H 4 HOH B 70 951 951 HOH HOH . H 4 HOH B 71 953 953 HOH HOH . H 4 HOH B 72 954 954 HOH HOH . H 4 HOH B 73 956 956 HOH HOH . H 4 HOH B 74 957 957 HOH HOH . H 4 HOH B 75 959 959 HOH HOH . H 4 HOH B 76 960 960 HOH HOH . H 4 HOH B 77 961 961 HOH HOH . H 4 HOH B 78 963 963 HOH HOH . H 4 HOH B 79 964 964 HOH HOH . H 4 HOH B 80 965 965 HOH HOH . H 4 HOH B 81 966 966 HOH HOH . H 4 HOH B 82 967 967 HOH HOH . H 4 HOH B 83 968 968 HOH HOH . H 4 HOH B 84 969 969 HOH HOH . H 4 HOH B 85 974 974 HOH HOH . H 4 HOH B 86 976 976 HOH HOH . H 4 HOH B 87 979 979 HOH HOH . H 4 HOH B 88 980 980 HOH HOH . H 4 HOH B 89 981 981 HOH HOH . H 4 HOH B 90 982 982 HOH HOH . H 4 HOH B 91 984 984 HOH HOH . H 4 HOH B 92 987 987 HOH HOH . H 4 HOH B 93 990 990 HOH HOH . H 4 HOH B 94 997 997 HOH HOH . H 4 HOH B 95 998 998 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N SEP . . . F 2 60.679 12.565 52.739 1 32.43 ? N SEP 270 B 1 HETATM 2 C CA SEP . . . F 2 59.837 11.405 52.474 1 33.63 ? CA SEP 270 B 1 HETATM 3 C CB SEP . . . F 2 59.813 11.124 50.971 1 32.72 ? CB SEP 270 B 1 HETATM 4 O OG SEP . . . F 2 59.45 12.301 50.269 1 30 ? OG SEP 270 B 1 HETATM 5 C C SEP . . . F 2 60.357 10.182 53.228 1 35.33 ? C SEP 270 B 1 HETATM 6 O O SEP . . . F 2 61.523 10.24 53.678 1 37.9 ? O SEP 270 B 1 HETATM 7 O OXT SEP . . . F 2 59.589 9.215 53.423 1 34.72 ? OXT SEP 270 B 1 HETATM 8 P P SEP . . . F 2 60.129 12.771 49.027 1 27.9 ? P SEP 270 B 1 HETATM 9 O O1P SEP . . . F 2 59.264 13.743 48.337 1 24.75 ? O1P SEP 270 B 1 HETATM 10 O O2P SEP . . . F 2 60.387 11.618 48.132 1 24.69 ? O2P SEP 270 B 1 HETATM 11 O O3P SEP . . . F 2 61.408 13.425 49.383 1 24.94 ? O3P SEP 270 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 238 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 11 #