data_1L8D
#
_model_server_result.job_id            Rg5jrIp82EI6BheiGPw06A 
_model_server_result.datetime_utc      '2025-02-28 12:26:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1l8d 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":507}' 
#
_entry.id    1L8D 
#
_exptl.entry_id    1L8D 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              192.124 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CITRIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          91.55 
_cell.angle_gamma         90 
_cell.entry_id            1L8D 
_cell.length_a            31.958 
_cell.length_b            77.868 
_cell.length_c            53.33 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1L8D 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             I 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 C HG HG . A HG 201 1_555 A SG CYS 50 A CYS 444 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? 
metalc ? metalc2 C HG HG . A HG 201 1_555 A SG CYS 53 A CYS 447 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? 
metalc ? metalc3 C HG HG . A HG 201 1_555 B SG CYS 50 B CYS 444 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? 
metalc ? metalc4 C HG HG . A HG 201 1_555 B SG CYS 53 B CYS 447 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.542 ? 
#
_chem_comp.formula           'C6 H8 O7' 
_chem_comp.formula_weight    192.124 
_chem_comp.id                CIT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CITRIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 CIT doub 70 n n 
C1 O2 CIT sing 71 n n 
C1 C2 CIT sing 72 n n 
O2 HO2 CIT sing 73 n n 
C2 C3 CIT sing 74 n n 
C2 H21 CIT sing 75 n n 
C2 H22 CIT sing 76 n n 
C3 O7 CIT sing 77 n n 
C3 C4 CIT sing 78 n n 
C3 C6 CIT sing 79 n n 
O7 HO7 CIT sing 80 n n 
C4 C5 CIT sing 81 n n 
C4 H41 CIT sing 82 n n 
C4 H42 CIT sing 83 n n 
C5 O3 CIT doub 84 n n 
C5 O4 CIT sing 85 n n 
O4 HO4 CIT sing 86 n n 
C6 O5 CIT doub 87 n n 
C6 O6 CIT sing 88 n n 
O6 HO6 CIT sing 89 n n 
#
_atom_sites.entry_id                     1L8D 
_atom_sites.fract_transf_matrix[1][1]    0.031291 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000847 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012842 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018758 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HG A 1 201 1 HG HG2 . 
D 3 PO4 A 1 302 2 PO4 PO4 . 
E 3 PO4 A 1 303 3 PO4 PO4 . 
F 3 PO4 A 1 304 4 PO4 PO4 . 
G 3 PO4 A 1 305 5 PO4 PO4 . 
H 3 PO4 A 1 306 6 PO4 PO4 . 
I 4 CIT A 1 507 6 CIT CIT . 
J 3 PO4 B 1 301 1 PO4 PO4 . 
K 5 HOH A 1 1 1 HOH HOH . 
K 5 HOH A 2 2 2 HOH HOH . 
K 5 HOH A 3 3 3 HOH HOH . 
K 5 HOH A 4 4 4 HOH HOH . 
K 5 HOH A 5 5 5 HOH HOH . 
K 5 HOH A 6 13 13 HOH HOH . 
K 5 HOH A 7 21 21 HOH HOH . 
K 5 HOH A 8 22 22 HOH HOH . 
K 5 HOH A 9 23 23 HOH HOH . 
K 5 HOH A 10 26 26 HOH HOH . 
K 5 HOH A 11 27 27 HOH HOH . 
K 5 HOH A 12 30 30 HOH HOH . 
K 5 HOH A 13 32 32 HOH HOH . 
K 5 HOH A 14 33 33 HOH HOH . 
K 5 HOH A 15 37 37 HOH HOH . 
K 5 HOH A 16 40 40 HOH HOH . 
K 5 HOH A 17 41 41 HOH HOH . 
K 5 HOH A 18 45 45 HOH HOH . 
K 5 HOH A 19 46 46 HOH HOH . 
K 5 HOH A 20 48 48 HOH HOH . 
K 5 HOH A 21 50 50 HOH HOH . 
K 5 HOH A 22 52 52 HOH HOH . 
K 5 HOH A 23 54 54 HOH HOH . 
K 5 HOH A 24 56 56 HOH HOH . 
K 5 HOH A 25 60 60 HOH HOH . 
K 5 HOH A 26 67 67 HOH HOH . 
K 5 HOH A 27 69 69 HOH HOH . 
K 5 HOH A 28 70 70 HOH HOH . 
K 5 HOH A 29 71 71 HOH HOH . 
K 5 HOH A 30 74 74 HOH HOH . 
K 5 HOH A 31 75 75 HOH HOH . 
K 5 HOH A 32 76 76 HOH HOH . 
K 5 HOH A 33 78 78 HOH HOH . 
K 5 HOH A 34 81 81 HOH HOH . 
K 5 HOH A 35 82 82 HOH HOH . 
K 5 HOH A 36 83 83 HOH HOH . 
K 5 HOH A 37 84 84 HOH HOH . 
K 5 HOH A 38 85 85 HOH HOH . 
K 5 HOH A 39 87 87 HOH HOH . 
K 5 HOH A 40 88 88 HOH HOH . 
K 5 HOH A 41 89 89 HOH HOH . 
K 5 HOH A 42 90 90 HOH HOH . 
K 5 HOH A 43 91 91 HOH HOH . 
K 5 HOH A 44 92 92 HOH HOH . 
K 5 HOH A 45 93 93 HOH HOH . 
K 5 HOH A 46 95 95 HOH HOH . 
K 5 HOH A 47 96 96 HOH HOH . 
K 5 HOH A 48 98 98 HOH HOH . 
K 5 HOH A 49 100 100 HOH HOH . 
K 5 HOH A 50 101 101 HOH HOH . 
K 5 HOH A 51 102 102 HOH HOH . 
K 5 HOH A 52 103 103 HOH HOH . 
K 5 HOH A 53 104 104 HOH HOH . 
K 5 HOH A 54 107 107 HOH HOH . 
K 5 HOH A 55 108 108 HOH HOH . 
K 5 HOH A 56 109 109 HOH HOH . 
K 5 HOH A 57 119 119 HOH HOH . 
K 5 HOH A 58 121 121 HOH HOH . 
K 5 HOH A 59 125 125 HOH HOH . 
K 5 HOH A 60 127 127 HOH HOH . 
K 5 HOH A 61 128 128 HOH HOH . 
K 5 HOH A 62 129 129 HOH HOH . 
K 5 HOH A 63 130 130 HOH HOH . 
K 5 HOH A 64 131 131 HOH HOH . 
K 5 HOH A 65 132 132 HOH HOH . 
K 5 HOH A 66 135 135 HOH HOH . 
K 5 HOH A 67 136 136 HOH HOH . 
K 5 HOH A 68 137 137 HOH HOH . 
K 5 HOH A 69 138 138 HOH HOH . 
K 5 HOH A 70 139 139 HOH HOH . 
K 5 HOH A 71 140 140 HOH HOH . 
K 5 HOH A 72 141 141 HOH HOH . 
K 5 HOH A 73 142 142 HOH HOH . 
K 5 HOH A 74 144 144 HOH HOH . 
L 5 HOH B 1 6 6 HOH HOH . 
L 5 HOH B 2 7 7 HOH HOH . 
L 5 HOH B 3 8 8 HOH HOH . 
L 5 HOH B 4 11 11 HOH HOH . 
L 5 HOH B 5 15 15 HOH HOH . 
L 5 HOH B 6 16 16 HOH HOH . 
L 5 HOH B 7 17 17 HOH HOH . 
L 5 HOH B 8 18 18 HOH HOH . 
L 5 HOH B 9 20 20 HOH HOH . 
L 5 HOH B 10 24 24 HOH HOH . 
L 5 HOH B 11 28 28 HOH HOH . 
L 5 HOH B 12 29 29 HOH HOH . 
L 5 HOH B 13 31 31 HOH HOH . 
L 5 HOH B 14 35 35 HOH HOH . 
L 5 HOH B 15 38 38 HOH HOH . 
L 5 HOH B 16 39 39 HOH HOH . 
L 5 HOH B 17 42 42 HOH HOH . 
L 5 HOH B 18 43 43 HOH HOH . 
L 5 HOH B 19 44 44 HOH HOH . 
L 5 HOH B 20 47 47 HOH HOH . 
L 5 HOH B 21 49 49 HOH HOH . 
L 5 HOH B 22 51 51 HOH HOH . 
L 5 HOH B 23 53 53 HOH HOH . 
L 5 HOH B 24 55 55 HOH HOH . 
L 5 HOH B 25 57 57 HOH HOH . 
L 5 HOH B 26 59 59 HOH HOH . 
L 5 HOH B 27 61 61 HOH HOH . 
L 5 HOH B 28 62 62 HOH HOH . 
L 5 HOH B 29 63 63 HOH HOH . 
L 5 HOH B 30 64 64 HOH HOH . 
L 5 HOH B 31 65 65 HOH HOH . 
L 5 HOH B 32 66 66 HOH HOH . 
L 5 HOH B 33 68 68 HOH HOH . 
L 5 HOH B 34 72 72 HOH HOH . 
L 5 HOH B 35 73 73 HOH HOH . 
L 5 HOH B 36 77 77 HOH HOH . 
L 5 HOH B 37 80 80 HOH HOH . 
L 5 HOH B 38 86 86 HOH HOH . 
L 5 HOH B 39 94 94 HOH HOH . 
L 5 HOH B 40 97 97 HOH HOH . 
L 5 HOH B 41 105 105 HOH HOH . 
L 5 HOH B 42 106 106 HOH HOH . 
L 5 HOH B 43 110 110 HOH HOH . 
L 5 HOH B 44 114 114 HOH HOH . 
L 5 HOH B 45 116 116 HOH HOH . 
L 5 HOH B 46 118 118 HOH HOH . 
L 5 HOH B 47 120 120 HOH HOH . 
L 5 HOH B 48 123 123 HOH HOH . 
L 5 HOH B 49 126 126 HOH HOH . 
L 5 HOH B 50 143 143 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 CIT . . . I 4 -16.949 -35.505 17.269 1 74.65 ? C1 CIT 507 A 1 
HETATM 2 O O1 CIT . . . I 4 -17.266 -35.492 16.219 1 75.67 ? O1 CIT 507 A 1 
HETATM 3 O O2 CIT . . . I 4 -16.56 -36.414 17.927 1 74.04 ? O2 CIT 507 A 1 
HETATM 4 C C2 CIT . . . I 4 -16.969 -34.206 18.124 1 74.27 ? C2 CIT 507 A 1 
HETATM 5 C C3 CIT . . . I 4 -18.314 -33.467 18.455 1 74.27 ? C3 CIT 507 A 1 
HETATM 6 O O7 CIT . . . I 4 -18.98 -33.014 17.227 1 74.02 ? O7 CIT 507 A 1 
HETATM 7 C C4 CIT . . . I 4 -19.303 -34.47 19.153 1 73.87 ? C4 CIT 507 A 1 
HETATM 8 C C5 CIT . . . I 4 -20.668 -33.912 19.533 1 72.48 ? C5 CIT 507 A 1 
HETATM 9 O O3 CIT . . . I 4 -21.455 -34.8 20.117 1 72.48 ? O3 CIT 507 A 1 
HETATM 10 O O4 CIT . . . I 4 -21.077 -32.796 19.355 1 72.1 ? O4 CIT 507 A 1 
HETATM 11 C C6 CIT . . . I 4 -17.963 -32.248 19.314 1 74.34 ? C6 CIT 507 A 1 
HETATM 12 O O5 CIT . . . I 4 -17.779 -32.454 20.566 1 74.12 ? O5 CIT 507 A 1 
HETATM 13 O O6 CIT . . . I 4 -17.858 -31.111 18.742 1 73.64 ? O6 CIT 507 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           294 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           13 
#