data_1L8H # _model_server_result.job_id raErXl0v4dLzKl0uvz7nDg _model_server_result.datetime_utc '2025-03-04 23:27:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1l8h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":307}' # _entry.id 1L8H # _exptl.entry_id 1L8H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1L8H _cell.length_a 91.265 _cell.length_b 91.265 _cell.length_c 239.714 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1L8H _symmetry.cell_setting ? _symmetry.Int_Tables_number 145 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 N N N ? 3 O N N ? 3 Q N N ? 3 R N N ? 3 T N N ? 3 V N N ? 3 W N N ? 3 X N N ? 3 Z N N ? 3 DA N N ? 3 GA N N ? 3 IA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OE1 GLU 82 B GLU 82 1_555 P K K . B K 256 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.709 ? metalc ? metalc2 B OE2 GLU 82 B GLU 82 1_555 P K K . B K 256 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.717 ? metalc ? metalc3 C OD2 ASP 146 C ASP 146 1_555 S K K . C K 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.242 ? metalc ? metalc4 S K K . C K 262 1_555 F OD2 ASP 146 F ASP 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.682 ? metalc ? metalc5 E OE1 GLU 82 E GLU 82 1_555 Y K K . E K 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.709 ? metalc ? metalc6 E OE2 GLU 82 E GLU 82 1_555 Y K K . E K 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.59 ? metalc ? metalc7 G OD2 ASP 146 G ASP 146 1_555 CA K K . G K 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.325 ? metalc ? metalc8 G NH1 ARG 153 G ARG 153 1_555 BA K K . G K 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.932 ? metalc ? metalc9 FA K K . J K 258 1_555 TA O HOH . J HOH 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.277 ? metalc ? metalc10 K OE1 GLU 82 K GLU 82 1_555 HA K K . K K 257 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.717 ? metalc ? metalc11 K OE2 GLU 82 K GLU 82 1_555 HA K K . K K 257 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.703 ? metalc ? metalc12 HA K K . K K 257 1_555 VA O HOH . L HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.048 ? metalc ? metalc13 JA K K . L K 255 1_555 VA O HOH . L HOH 589 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.064 ? # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 334 n n C C2 TRS sing 335 n n C C3 TRS sing 336 n n C N TRS sing 337 n n C1 O1 TRS sing 338 n n C1 H11 TRS sing 339 n n C1 H12 TRS sing 340 n n C2 O2 TRS sing 341 n n C2 H21 TRS sing 342 n n C2 H22 TRS sing 343 n n C3 O3 TRS sing 344 n n C3 H31 TRS sing 345 n n C3 H32 TRS sing 346 n n N HN1 TRS sing 347 n n N HN2 TRS sing 348 n n N HN3 TRS sing 349 n n O1 HO1 TRS sing 350 n n O2 HO2 TRS sing 351 n n O3 HO3 TRS sing 352 n n # _atom_sites.entry_id 1L8H _atom_sites.fract_transf_matrix[1][1] 0.010957 _atom_sites.fract_transf_matrix[1][2] 0.006326 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012652 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004172 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 2 K A 1 252 252 K K . N 3 TRS A 1 301 301 TRS TRS . O 3 TRS A 1 309 309 TRS TRS . P 2 K B 1 256 256 K K . Q 3 TRS B 1 304 304 TRS TRS . R 3 TRS B 1 312 312 TRS TRS . S 2 K C 1 262 262 K K . T 3 TRS C 1 307 307 TRS TRS . U 2 K D 1 261 261 K K . V 3 TRS D 1 305 305 TRS TRS . W 3 TRS D 1 306 306 TRS TRS . X 3 TRS D 1 310 310 TRS TRS . Y 2 K E 1 251 251 K K . Z 3 TRS E 1 311 311 TRS TRS . AA 2 K G 1 254 254 K K . BA 2 K G 1 259 259 K K . CA 2 K G 1 260 260 K K . DA 3 TRS G 1 303 303 TRS TRS . EA 2 K H 1 253 253 K K . FA 2 K J 1 258 258 K K . GA 3 TRS J 1 308 308 TRS TRS . HA 2 K K 1 257 257 K K . IA 3 TRS K 1 302 302 TRS TRS . JA 2 K L 1 255 255 K K . KA 4 HOH A 1 538 538 HOH HOH . KA 4 HOH A 2 546 546 HOH HOH . KA 4 HOH A 3 551 551 HOH HOH . KA 4 HOH A 4 557 557 HOH HOH . KA 4 HOH A 5 567 567 HOH HOH . KA 4 HOH A 6 571 571 HOH HOH . KA 4 HOH A 7 575 575 HOH HOH . KA 4 HOH A 8 580 580 HOH HOH . KA 4 HOH A 9 581 581 HOH HOH . KA 4 HOH A 10 585 585 HOH HOH . KA 4 HOH A 11 595 595 HOH HOH . LA 4 HOH B 1 583 583 HOH HOH . LA 4 HOH B 2 587 587 HOH HOH . LA 4 HOH B 3 588 588 HOH HOH . LA 4 HOH B 4 591 591 HOH HOH . LA 4 HOH B 5 599 599 HOH HOH . LA 4 HOH B 6 600 600 HOH HOH . LA 4 HOH B 7 613 613 HOH HOH . MA 4 HOH C 1 537 537 HOH HOH . MA 4 HOH C 2 553 553 HOH HOH . MA 4 HOH C 3 555 555 HOH HOH . MA 4 HOH C 4 559 559 HOH HOH . MA 4 HOH C 5 569 569 HOH HOH . MA 4 HOH C 6 578 578 HOH HOH . MA 4 HOH C 7 582 582 HOH HOH . NA 4 HOH D 1 504 504 HOH HOH . NA 4 HOH D 2 508 508 HOH HOH . NA 4 HOH D 3 509 509 HOH HOH . NA 4 HOH D 4 511 511 HOH HOH . NA 4 HOH D 5 514 514 HOH HOH . NA 4 HOH D 6 516 516 HOH HOH . NA 4 HOH D 7 517 517 HOH HOH . NA 4 HOH D 8 519 519 HOH HOH . NA 4 HOH D 9 521 521 HOH HOH . NA 4 HOH D 10 525 525 HOH HOH . NA 4 HOH D 11 526 526 HOH HOH . NA 4 HOH D 12 529 529 HOH HOH . NA 4 HOH D 13 530 530 HOH HOH . NA 4 HOH D 14 531 531 HOH HOH . NA 4 HOH D 15 535 535 HOH HOH . NA 4 HOH D 16 542 542 HOH HOH . OA 4 HOH E 1 552 552 HOH HOH . OA 4 HOH E 2 554 554 HOH HOH . OA 4 HOH E 3 561 561 HOH HOH . OA 4 HOH E 4 565 565 HOH HOH . OA 4 HOH E 5 572 572 HOH HOH . OA 4 HOH E 6 574 574 HOH HOH . OA 4 HOH E 7 592 592 HOH HOH . PA 4 HOH F 1 505 505 HOH HOH . PA 4 HOH F 2 507 507 HOH HOH . PA 4 HOH F 3 522 522 HOH HOH . PA 4 HOH F 4 540 540 HOH HOH . PA 4 HOH F 5 558 558 HOH HOH . PA 4 HOH F 6 562 562 HOH HOH . PA 4 HOH F 7 573 573 HOH HOH . PA 4 HOH F 8 579 579 HOH HOH . PA 4 HOH F 9 590 590 HOH HOH . PA 4 HOH F 10 604 604 HOH HOH . QA 4 HOH G 1 515 515 HOH HOH . QA 4 HOH G 2 528 528 HOH HOH . QA 4 HOH G 3 532 532 HOH HOH . QA 4 HOH G 4 539 539 HOH HOH . QA 4 HOH G 5 550 550 HOH HOH . QA 4 HOH G 6 560 560 HOH HOH . QA 4 HOH G 7 563 563 HOH HOH . QA 4 HOH G 8 566 566 HOH HOH . QA 4 HOH G 9 570 570 HOH HOH . RA 4 HOH H 1 564 564 HOH HOH . RA 4 HOH H 2 568 568 HOH HOH . RA 4 HOH H 3 576 576 HOH HOH . RA 4 HOH H 4 584 584 HOH HOH . RA 4 HOH H 5 594 594 HOH HOH . RA 4 HOH H 6 597 597 HOH HOH . RA 4 HOH H 7 602 602 HOH HOH . RA 4 HOH H 8 605 605 HOH HOH . RA 4 HOH H 9 608 608 HOH HOH . RA 4 HOH H 10 614 614 HOH HOH . SA 4 HOH I 1 502 502 HOH HOH . SA 4 HOH I 2 503 503 HOH HOH . SA 4 HOH I 3 510 510 HOH HOH . SA 4 HOH I 4 512 512 HOH HOH . SA 4 HOH I 5 524 524 HOH HOH . SA 4 HOH I 6 527 527 HOH HOH . SA 4 HOH I 7 533 533 HOH HOH . SA 4 HOH I 8 536 536 HOH HOH . SA 4 HOH I 9 541 541 HOH HOH . SA 4 HOH I 10 544 544 HOH HOH . SA 4 HOH I 11 545 545 HOH HOH . SA 4 HOH I 12 548 548 HOH HOH . SA 4 HOH I 13 549 549 HOH HOH . TA 4 HOH J 1 501 501 HOH HOH . TA 4 HOH J 2 506 506 HOH HOH . TA 4 HOH J 3 513 513 HOH HOH . TA 4 HOH J 4 518 518 HOH HOH . TA 4 HOH J 5 520 520 HOH HOH . TA 4 HOH J 6 523 523 HOH HOH . TA 4 HOH J 7 534 534 HOH HOH . TA 4 HOH J 8 543 543 HOH HOH . TA 4 HOH J 9 547 547 HOH HOH . TA 4 HOH J 10 556 556 HOH HOH . UA 4 HOH K 1 593 593 HOH HOH . UA 4 HOH K 2 596 596 HOH HOH . UA 4 HOH K 3 598 598 HOH HOH . UA 4 HOH K 4 606 606 HOH HOH . UA 4 HOH K 5 607 607 HOH HOH . UA 4 HOH K 6 609 609 HOH HOH . VA 4 HOH L 1 577 577 HOH HOH . VA 4 HOH L 2 586 586 HOH HOH . VA 4 HOH L 3 589 589 HOH HOH . VA 4 HOH L 4 601 601 HOH HOH . VA 4 HOH L 5 603 603 HOH HOH . VA 4 HOH L 6 610 610 HOH HOH . VA 4 HOH L 7 611 611 HOH HOH . VA 4 HOH L 8 612 612 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . T 3 23.749 13.602 -26.783 1 31.13 ? C TRS 307 C 1 HETATM 2 C C1 TRS . . . T 3 23.364 12.224 -26.214 1 30.02 ? C1 TRS 307 C 1 HETATM 3 C C2 TRS . . . T 3 25.28 13.801 -26.579 1 32.07 ? C2 TRS 307 C 1 HETATM 4 C C3 TRS . . . T 3 22.901 14.762 -26.189 1 32.62 ? C3 TRS 307 C 1 HETATM 5 N N TRS . . . T 3 23.534 13.413 -28.247 1 30.81 ? N TRS 307 C 1 HETATM 6 O O1 TRS . . . T 3 24.156 11.178 -26.737 1 27.66 ? O1 TRS 307 C 1 HETATM 7 O O2 TRS . . . T 3 25.661 15.188 -26.595 1 32.48 ? O2 TRS 307 C 1 HETATM 8 O O3 TRS . . . T 3 21.498 14.585 -26.373 1 34.4 ? O3 TRS 307 C 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 8 #