data_1L8L # _model_server_result.job_id Q7tP0_O-COBDq6w8odcctg _model_server_result.datetime_utc '2025-04-25 06:45:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1l8l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":801}' # _entry.id 1L8L # _exptl.entry_id 1L8L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 169.073 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'D-2-AMINO-3-PHOSPHONO-PROPIONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1L8L _cell.length_a 106.213 _cell.length_b 106.213 _cell.length_c 87.812 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1L8L _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C3 H8 N O5 P' _chem_comp.formula_weight 169.073 _chem_comp.id APO _chem_comp.mon_nstd_flag . _chem_comp.name 'D-2-AMINO-3-PHOSPHONO-PROPIONIC ACID' _chem_comp.type 'd-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N2 APO sing 13 n n C1 C3 APO sing 14 n n C1 C6 APO sing 15 n n C1 HC1 APO sing 16 n n N2 HN21 APO sing 17 n n N2 HN22 APO sing 18 n n C3 O4 APO doub 19 n n C3 O5 APO sing 20 n n O5 HO5 APO sing 21 n n C6 P7 APO sing 22 n n C6 HC61 APO sing 23 n n C6 HC62 APO sing 24 n n P7 O8 APO sing 25 n n P7 O9 APO sing 26 n n P7 O10 APO doub 27 n n O8 HO8 APO sing 28 n n O9 HO9 APO sing 29 n n # _atom_sites.entry_id 1L8L _atom_sites.fract_transf_matrix[1][1] 0.009415 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009415 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011388 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 APO A 1 800 800 APO AP3 . D 2 APO B 1 801 800 APO AP3 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 APO . . . D 2 -13.064 22.167 -57.311 1 35.11 ? C1 APO 801 B 1 HETATM 2 N N2 APO . . . D 2 -12.324 20.981 -56.746 1 33.12 ? N2 APO 801 B 1 HETATM 3 C C3 APO . . . D 2 -12.045 23.313 -57.734 1 35.63 ? C3 APO 801 B 1 HETATM 4 O O4 APO . . . D 2 -11.812 24.29 -56.987 1 35.45 ? O4 APO 801 B 1 HETATM 5 O O5 APO . . . D 2 -11.434 23.125 -58.96 1 33.51 ? O5 APO 801 B 1 HETATM 6 C C6 APO . . . D 2 -14.032 21.64 -58.467 1 33.36 ? C6 APO 801 B 1 HETATM 7 P P7 APO . . . D 2 -15.682 21.119 -57.989 1 32.46 ? P7 APO 801 B 1 HETATM 8 O O8 APO . . . D 2 -15.513 19.834 -57.098 1 32.46 ? O8 APO 801 B 1 HETATM 9 O O9 APO . . . D 2 -16.445 22.2 -57.104 1 25.43 ? O9 APO 801 B 1 HETATM 10 O O10 APO . . . D 2 -16.51 20.648 -59.271 1 31.14 ? O10 APO 801 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 10 #