data_1LAF # _model_server_result.job_id -JRGv2qXQGsV19WM1Guugg _model_server_result.datetime_utc '2024-12-06 07:05:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1laf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":240}' # _entry.id 1LAF # _exptl.entry_id 1LAF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 175.209 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ARGININE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1LAF _cell.length_a 37.79 _cell.length_b 59.63 _cell.length_c 115.93 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LAF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 38 _struct_conn.ptnr1_auth_asym_id E _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 38 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 45 _struct_conn.ptnr2_auth_asym_id E _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 45 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.304 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C6 H15 N4 O2 1' _chem_comp.formula_weight 175.209 _chem_comp.id ARG _chem_comp.mon_nstd_flag y _chem_comp.name ARGININE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA ARG sing 13 n n N H ARG sing 14 n n N H2 ARG sing 15 n n CA C ARG sing 16 n n CA CB ARG sing 17 n n CA HA ARG sing 18 n n C O ARG doub 19 n n C OXT ARG sing 20 n n CB CG ARG sing 21 n n CB HB2 ARG sing 22 n n CB HB3 ARG sing 23 n n CG CD ARG sing 24 n n CG HG2 ARG sing 25 n n CG HG3 ARG sing 26 n n CD NE ARG sing 27 n n CD HD2 ARG sing 28 n n CD HD3 ARG sing 29 n n NE CZ ARG sing 30 n n NE HE ARG sing 31 n n CZ NH1 ARG sing 32 n n CZ NH2 ARG doub 33 n n NH1 HH11 ARG sing 34 n n NH1 HH12 ARG sing 35 n n NH2 HH21 ARG sing 36 n n NH2 HH22 ARG sing 37 n n OXT HXT ARG sing 38 n n # _atom_sites.entry_id 1LAF _atom_sites.fract_transf_matrix[1][1] 0.026462 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01677 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008626 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ARG E 1 240 240 ARG ARG . C 3 HOH E 1 401 401 HOH HOH . C 3 HOH E 2 402 402 HOH HOH . C 3 HOH E 3 403 403 HOH HOH . C 3 HOH E 4 404 404 HOH HOH . C 3 HOH E 5 405 405 HOH HOH . C 3 HOH E 6 406 406 HOH HOH . C 3 HOH E 7 407 407 HOH HOH . C 3 HOH E 8 408 408 HOH HOH . C 3 HOH E 9 409 409 HOH HOH . C 3 HOH E 10 410 410 HOH HOH . C 3 HOH E 11 411 411 HOH HOH . C 3 HOH E 12 412 412 HOH HOH . C 3 HOH E 13 413 413 HOH HOH . C 3 HOH E 14 414 414 HOH HOH . C 3 HOH E 15 415 415 HOH HOH . C 3 HOH E 16 416 416 HOH HOH . C 3 HOH E 17 417 417 HOH HOH . C 3 HOH E 18 418 418 HOH HOH . C 3 HOH E 19 419 419 HOH HOH . C 3 HOH E 20 420 420 HOH HOH . C 3 HOH E 21 421 421 HOH HOH . C 3 HOH E 22 422 422 HOH HOH . C 3 HOH E 23 423 423 HOH HOH . C 3 HOH E 24 424 424 HOH HOH . C 3 HOH E 25 425 425 HOH HOH . C 3 HOH E 26 426 426 HOH HOH . C 3 HOH E 27 427 427 HOH HOH . C 3 HOH E 28 428 428 HOH HOH . C 3 HOH E 29 429 429 HOH HOH . C 3 HOH E 30 430 430 HOH HOH . C 3 HOH E 31 431 431 HOH HOH . C 3 HOH E 32 432 432 HOH HOH . C 3 HOH E 33 433 433 HOH HOH . C 3 HOH E 34 434 434 HOH HOH . C 3 HOH E 35 435 435 HOH HOH . C 3 HOH E 36 436 436 HOH HOH . C 3 HOH E 37 437 437 HOH HOH . C 3 HOH E 38 438 438 HOH HOH . C 3 HOH E 39 439 439 HOH HOH . C 3 HOH E 40 440 440 HOH HOH . C 3 HOH E 41 441 441 HOH HOH . C 3 HOH E 42 442 442 HOH HOH . C 3 HOH E 43 443 443 HOH HOH . C 3 HOH E 44 444 444 HOH HOH . C 3 HOH E 45 445 445 HOH HOH . C 3 HOH E 46 446 446 HOH HOH . C 3 HOH E 47 447 447 HOH HOH . C 3 HOH E 48 448 448 HOH HOH . C 3 HOH E 49 449 449 HOH HOH . C 3 HOH E 50 450 450 HOH HOH . C 3 HOH E 51 451 451 HOH HOH . C 3 HOH E 52 452 452 HOH HOH . C 3 HOH E 53 453 453 HOH HOH . C 3 HOH E 54 454 454 HOH HOH . C 3 HOH E 55 455 455 HOH HOH . C 3 HOH E 56 456 456 HOH HOH . C 3 HOH E 57 457 457 HOH HOH . C 3 HOH E 58 458 458 HOH HOH . C 3 HOH E 59 459 459 HOH HOH . C 3 HOH E 60 460 460 HOH HOH . C 3 HOH E 61 461 461 HOH HOH . C 3 HOH E 62 462 462 HOH HOH . C 3 HOH E 63 463 463 HOH HOH . C 3 HOH E 64 464 464 HOH HOH . C 3 HOH E 65 465 465 HOH HOH . C 3 HOH E 66 466 466 HOH HOH . C 3 HOH E 67 467 467 HOH HOH . C 3 HOH E 68 468 468 HOH HOH . C 3 HOH E 69 469 469 HOH HOH . C 3 HOH E 70 470 470 HOH HOH . C 3 HOH E 71 471 471 HOH HOH . C 3 HOH E 72 472 472 HOH HOH . C 3 HOH E 73 473 473 HOH HOH . C 3 HOH E 74 474 474 HOH HOH . C 3 HOH E 75 475 475 HOH HOH . C 3 HOH E 76 476 476 HOH HOH . C 3 HOH E 77 477 477 HOH HOH . C 3 HOH E 78 478 478 HOH HOH . C 3 HOH E 79 479 479 HOH HOH . C 3 HOH E 80 480 480 HOH HOH . C 3 HOH E 81 481 481 HOH HOH . C 3 HOH E 82 482 482 HOH HOH . C 3 HOH E 83 483 483 HOH HOH . C 3 HOH E 84 484 484 HOH HOH . C 3 HOH E 85 485 485 HOH HOH . C 3 HOH E 86 486 486 HOH HOH . C 3 HOH E 87 487 487 HOH HOH . C 3 HOH E 88 488 488 HOH HOH . C 3 HOH E 89 489 489 HOH HOH . C 3 HOH E 90 490 490 HOH HOH . C 3 HOH E 91 491 491 HOH HOH . C 3 HOH E 92 492 492 HOH HOH . C 3 HOH E 93 493 493 HOH HOH . C 3 HOH E 94 494 494 HOH HOH . C 3 HOH E 95 495 495 HOH HOH . C 3 HOH E 96 496 496 HOH HOH . C 3 HOH E 97 497 497 HOH HOH . C 3 HOH E 98 498 498 HOH HOH . C 3 HOH E 99 499 499 HOH HOH . C 3 HOH E 100 500 500 HOH HOH . C 3 HOH E 101 501 501 HOH HOH . C 3 HOH E 102 502 502 HOH HOH . C 3 HOH E 103 503 503 HOH HOH . C 3 HOH E 104 504 504 HOH HOH . C 3 HOH E 105 505 505 HOH HOH . C 3 HOH E 106 506 506 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N ARG . . . B 2 18.756 58.155 45.918 1 7.42 ? N ARG 240 E 1 HETATM 2 C CA ARG . . . B 2 18.9 57.429 47.138 1 8.97 ? CA ARG 240 E 1 HETATM 3 C C ARG . . . B 2 18.275 58.326 48.222 1 9.68 ? C ARG 240 E 1 HETATM 4 O O ARG . . . B 2 18.121 57.877 49.348 1 12.13 ? O ARG 240 E 1 HETATM 5 C CB ARG . . . B 2 20.384 57.161 47.39 1 5.75 ? CB ARG 240 E 1 HETATM 6 C CG ARG . . . B 2 21.294 58.356 47.141 1 10.14 ? CG ARG 240 E 1 HETATM 7 C CD ARG . . . B 2 22.615 58.092 47.782 1 7.08 ? CD ARG 240 E 1 HETATM 8 N NE ARG . . . B 2 23.538 59.158 47.468 1 9.95 ? NE ARG 240 E 1 HETATM 9 C CZ ARG . . . B 2 24.777 59.157 47.972 1 8.4 ? CZ ARG 240 E 1 HETATM 10 N NH1 ARG . . . B 2 25.158 58.225 48.803 1 8.5 ? NH1 ARG 240 E 1 HETATM 11 N NH2 ARG . . . B 2 25.662 60.113 47.693 1 8.05 ? NH2 ARG 240 E 1 HETATM 12 O OXT ARG . . . B 2 17.917 59.477 47.92 1 12.01 ? OXT ARG 240 E 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 12 #