data_1LB8 # _model_server_result.job_id c62jkuPkGTUGKtRNAZSxAg _model_server_result.datetime_utc '2024-11-25 10:54:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1lb8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":427}' # _entry.id 1LB8 # _exptl.entry_id 1LB8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 186.165 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(S)-ALPHA-AMINO-3-HYDROXY-5-METHYL-4-ISOXAZOLEPROPIONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1LB8 _cell.length_a 98.56 _cell.length_b 121.376 _cell.length_c 47.342 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LB8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 206 A CYS 206 1_555 A SG CYS 261 A CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 B SG CYS 206 B CYS 206 1_555 B SG CYS 261 B CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C7 H10 N2 O4' _chem_comp.formula_weight 186.165 _chem_comp.id AMQ _chem_comp.mon_nstd_flag . _chem_comp.name '(S)-ALPHA-AMINO-3-HYDROXY-5-METHYL-4-ISOXAZOLEPROPIONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms AMPA # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA AMQ sing 13 n n N H AMQ sing 14 n n N HN2 AMQ sing 15 n n CA C AMQ sing 16 n n CA CB AMQ sing 17 n n CA HA AMQ sing 18 n n C OT1 AMQ doub 19 n n C OT2 AMQ sing 20 n n OT2 HXT AMQ sing 21 n n CB CG AMQ sing 22 n n CB HB1 AMQ sing 23 n n CB HB2 AMQ sing 24 n n CG CD1 AMQ sing 25 n y CG CD2 AMQ doub 26 n y CD1 OE1 AMQ sing 27 n n CD1 NE1 AMQ doub 28 n y CD2 CE2 AMQ sing 29 n n CD2 OE2 AMQ sing 30 n y CE2 HE21 AMQ sing 31 n n CE2 HE22 AMQ sing 32 n n CE2 HE23 AMQ sing 33 n n OE1 HE1 AMQ sing 34 n n NE1 OE2 AMQ sing 35 n y # _atom_sites.entry_id 1LB8 _atom_sites.fract_transf_matrix[1][1] 0.010146 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008239 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021123 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 AMQ A 1 427 427 AMQ AMP . D 2 AMQ B 1 428 428 AMQ AMP . E 3 HOH A 1 428 2 HOH TIP . E 3 HOH A 2 429 5 HOH TIP . E 3 HOH A 3 430 6 HOH TIP . E 3 HOH A 4 431 8 HOH TIP . E 3 HOH A 5 432 9 HOH TIP . E 3 HOH A 6 433 11 HOH TIP . E 3 HOH A 7 434 13 HOH TIP . E 3 HOH A 8 435 14 HOH TIP . E 3 HOH A 9 436 15 HOH TIP . E 3 HOH A 10 437 17 HOH TIP . E 3 HOH A 11 438 19 HOH TIP . E 3 HOH A 12 439 21 HOH TIP . E 3 HOH A 13 440 22 HOH TIP . E 3 HOH A 14 441 23 HOH TIP . E 3 HOH A 15 442 29 HOH TIP . E 3 HOH A 16 443 30 HOH TIP . E 3 HOH A 17 444 31 HOH TIP . E 3 HOH A 18 445 32 HOH TIP . E 3 HOH A 19 446 33 HOH TIP . E 3 HOH A 20 447 34 HOH TIP . E 3 HOH A 21 448 35 HOH TIP . E 3 HOH A 22 449 36 HOH TIP . E 3 HOH A 23 450 38 HOH TIP . E 3 HOH A 24 451 39 HOH TIP . E 3 HOH A 25 452 42 HOH TIP . E 3 HOH A 26 453 44 HOH TIP . E 3 HOH A 27 454 45 HOH TIP . E 3 HOH A 28 455 46 HOH TIP . E 3 HOH A 29 456 47 HOH TIP . E 3 HOH A 30 457 48 HOH TIP . E 3 HOH A 31 458 50 HOH TIP . E 3 HOH A 32 459 51 HOH TIP . E 3 HOH A 33 460 54 HOH TIP . E 3 HOH A 34 461 56 HOH TIP . E 3 HOH A 35 462 57 HOH TIP . E 3 HOH A 36 463 58 HOH TIP . E 3 HOH A 37 464 59 HOH TIP . E 3 HOH A 38 465 60 HOH TIP . E 3 HOH A 39 466 61 HOH TIP . E 3 HOH A 40 467 62 HOH TIP . E 3 HOH A 41 468 65 HOH TIP . E 3 HOH A 42 469 66 HOH TIP . E 3 HOH A 43 470 68 HOH TIP . E 3 HOH A 44 471 70 HOH TIP . E 3 HOH A 45 472 72 HOH TIP . E 3 HOH A 46 473 75 HOH TIP . E 3 HOH A 47 474 76 HOH TIP . E 3 HOH A 48 475 77 HOH TIP . E 3 HOH A 49 476 79 HOH TIP . E 3 HOH A 50 477 80 HOH TIP . E 3 HOH A 51 478 81 HOH TIP . E 3 HOH A 52 479 82 HOH TIP . E 3 HOH A 53 480 84 HOH TIP . E 3 HOH A 54 481 87 HOH TIP . E 3 HOH A 55 482 90 HOH TIP . E 3 HOH A 56 483 93 HOH TIP . E 3 HOH A 57 484 94 HOH TIP . E 3 HOH A 58 485 99 HOH TIP . E 3 HOH A 59 486 102 HOH TIP . E 3 HOH A 60 487 105 HOH TIP . E 3 HOH A 61 488 106 HOH TIP . E 3 HOH A 62 489 107 HOH TIP . E 3 HOH A 63 490 108 HOH TIP . E 3 HOH A 64 491 109 HOH TIP . E 3 HOH A 65 492 110 HOH TIP . E 3 HOH A 66 493 112 HOH TIP . E 3 HOH A 67 494 113 HOH TIP . E 3 HOH A 68 495 115 HOH TIP . E 3 HOH A 69 496 118 HOH TIP . E 3 HOH A 70 497 121 HOH TIP . E 3 HOH A 71 498 123 HOH TIP . E 3 HOH A 72 499 124 HOH TIP . E 3 HOH A 73 500 125 HOH TIP . E 3 HOH A 74 501 129 HOH TIP . E 3 HOH A 75 502 131 HOH TIP . E 3 HOH A 76 503 132 HOH TIP . E 3 HOH A 77 504 135 HOH TIP . E 3 HOH A 78 505 137 HOH TIP . E 3 HOH A 79 506 139 HOH TIP . E 3 HOH A 80 507 140 HOH TIP . E 3 HOH A 81 508 144 HOH TIP . E 3 HOH A 82 509 145 HOH TIP . E 3 HOH A 83 510 146 HOH TIP . E 3 HOH A 84 511 147 HOH TIP . E 3 HOH A 85 512 148 HOH TIP . E 3 HOH A 86 513 149 HOH TIP . E 3 HOH A 87 514 151 HOH TIP . E 3 HOH A 88 515 153 HOH TIP . E 3 HOH A 89 516 154 HOH TIP . E 3 HOH A 90 517 156 HOH TIP . E 3 HOH A 91 518 159 HOH TIP . E 3 HOH A 92 519 162 HOH TIP . E 3 HOH A 93 520 164 HOH TIP . E 3 HOH A 94 521 166 HOH TIP . E 3 HOH A 95 522 168 HOH TIP . E 3 HOH A 96 523 169 HOH TIP . E 3 HOH A 97 524 171 HOH TIP . E 3 HOH A 98 525 172 HOH TIP . E 3 HOH A 99 526 173 HOH TIP . E 3 HOH A 100 527 175 HOH TIP . E 3 HOH A 101 528 176 HOH TIP . E 3 HOH A 102 529 180 HOH TIP . E 3 HOH A 103 530 183 HOH TIP . E 3 HOH A 104 531 186 HOH TIP . E 3 HOH A 105 532 190 HOH TIP . E 3 HOH A 106 533 192 HOH TIP . E 3 HOH A 107 534 193 HOH TIP . E 3 HOH A 108 535 194 HOH TIP . E 3 HOH A 109 536 197 HOH TIP . E 3 HOH A 110 537 198 HOH TIP . E 3 HOH A 111 538 200 HOH TIP . E 3 HOH A 112 539 203 HOH TIP . E 3 HOH A 113 540 205 HOH TIP . E 3 HOH A 114 541 206 HOH TIP . E 3 HOH A 115 542 208 HOH TIP . E 3 HOH A 116 543 210 HOH TIP . E 3 HOH A 117 544 211 HOH TIP . E 3 HOH A 118 545 219 HOH TIP . E 3 HOH A 119 546 220 HOH TIP . E 3 HOH A 120 547 221 HOH TIP . E 3 HOH A 121 548 222 HOH TIP . E 3 HOH A 122 549 224 HOH TIP . F 3 HOH B 1 429 1 HOH TIP . F 3 HOH B 2 430 3 HOH TIP . F 3 HOH B 3 431 4 HOH TIP . F 3 HOH B 4 432 7 HOH TIP . F 3 HOH B 5 433 10 HOH TIP . F 3 HOH B 6 434 12 HOH TIP . F 3 HOH B 7 435 16 HOH TIP . F 3 HOH B 8 436 18 HOH TIP . F 3 HOH B 9 437 20 HOH TIP . F 3 HOH B 10 438 24 HOH TIP . F 3 HOH B 11 439 25 HOH TIP . F 3 HOH B 12 440 26 HOH TIP . F 3 HOH B 13 441 27 HOH TIP . F 3 HOH B 14 442 28 HOH TIP . F 3 HOH B 15 443 37 HOH TIP . F 3 HOH B 16 444 40 HOH TIP . F 3 HOH B 17 445 41 HOH TIP . F 3 HOH B 18 446 43 HOH TIP . F 3 HOH B 19 447 49 HOH TIP . F 3 HOH B 20 448 52 HOH TIP . F 3 HOH B 21 449 53 HOH TIP . F 3 HOH B 22 450 55 HOH TIP . F 3 HOH B 23 451 63 HOH TIP . F 3 HOH B 24 452 64 HOH TIP . F 3 HOH B 25 453 67 HOH TIP . F 3 HOH B 26 454 69 HOH TIP . F 3 HOH B 27 455 71 HOH TIP . F 3 HOH B 28 456 73 HOH TIP . F 3 HOH B 29 457 74 HOH TIP . F 3 HOH B 30 458 78 HOH TIP . F 3 HOH B 31 459 83 HOH TIP . F 3 HOH B 32 460 85 HOH TIP . F 3 HOH B 33 461 86 HOH TIP . F 3 HOH B 34 462 88 HOH TIP . F 3 HOH B 35 463 89 HOH TIP . F 3 HOH B 36 464 91 HOH TIP . F 3 HOH B 37 465 92 HOH TIP . F 3 HOH B 38 466 95 HOH TIP . F 3 HOH B 39 467 96 HOH TIP . F 3 HOH B 40 468 97 HOH TIP . F 3 HOH B 41 469 98 HOH TIP . F 3 HOH B 42 470 100 HOH TIP . F 3 HOH B 43 471 101 HOH TIP . F 3 HOH B 44 472 103 HOH TIP . F 3 HOH B 45 473 104 HOH TIP . F 3 HOH B 46 474 111 HOH TIP . F 3 HOH B 47 475 114 HOH TIP . F 3 HOH B 48 476 116 HOH TIP . F 3 HOH B 49 477 117 HOH TIP . F 3 HOH B 50 478 119 HOH TIP . F 3 HOH B 51 479 120 HOH TIP . F 3 HOH B 52 480 122 HOH TIP . F 3 HOH B 53 481 126 HOH TIP . F 3 HOH B 54 482 127 HOH TIP . F 3 HOH B 55 483 128 HOH TIP . F 3 HOH B 56 484 130 HOH TIP . F 3 HOH B 57 485 133 HOH TIP . F 3 HOH B 58 486 134 HOH TIP . F 3 HOH B 59 487 136 HOH TIP . F 3 HOH B 60 488 138 HOH TIP . F 3 HOH B 61 489 141 HOH TIP . F 3 HOH B 62 490 142 HOH TIP . F 3 HOH B 63 491 143 HOH TIP . F 3 HOH B 64 492 150 HOH TIP . F 3 HOH B 65 493 152 HOH TIP . F 3 HOH B 66 494 155 HOH TIP . F 3 HOH B 67 495 157 HOH TIP . F 3 HOH B 68 496 158 HOH TIP . F 3 HOH B 69 497 160 HOH TIP . F 3 HOH B 70 498 161 HOH TIP . F 3 HOH B 71 499 163 HOH TIP . F 3 HOH B 72 500 165 HOH TIP . F 3 HOH B 73 501 167 HOH TIP . F 3 HOH B 74 502 170 HOH TIP . F 3 HOH B 75 503 174 HOH TIP . F 3 HOH B 76 504 177 HOH TIP . F 3 HOH B 77 505 178 HOH TIP . F 3 HOH B 78 506 179 HOH TIP . F 3 HOH B 79 507 181 HOH TIP . F 3 HOH B 80 508 182 HOH TIP . F 3 HOH B 81 509 184 HOH TIP . F 3 HOH B 82 510 185 HOH TIP . F 3 HOH B 83 511 187 HOH TIP . F 3 HOH B 84 512 188 HOH TIP . F 3 HOH B 85 513 189 HOH TIP . F 3 HOH B 86 514 191 HOH TIP . F 3 HOH B 87 515 195 HOH TIP . F 3 HOH B 88 516 196 HOH TIP . F 3 HOH B 89 517 199 HOH TIP . F 3 HOH B 90 518 201 HOH TIP . F 3 HOH B 91 519 202 HOH TIP . F 3 HOH B 92 520 204 HOH TIP . F 3 HOH B 93 521 207 HOH TIP . F 3 HOH B 94 522 209 HOH TIP . F 3 HOH B 95 523 212 HOH TIP . F 3 HOH B 96 524 213 HOH TIP . F 3 HOH B 97 525 214 HOH TIP . F 3 HOH B 98 526 215 HOH TIP . F 3 HOH B 99 527 216 HOH TIP . F 3 HOH B 100 528 217 HOH TIP . F 3 HOH B 101 529 218 HOH TIP . F 3 HOH B 102 530 223 HOH TIP . F 3 HOH B 103 531 225 HOH TIP . F 3 HOH B 104 532 226 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N AMQ . . . C 2 19.808 53.766 19.305 1 8.48 ? N AMQ 427 A 1 HETATM 2 C CA AMQ . . . C 2 18.306 53.633 19.285 1 10.12 ? CA AMQ 427 A 1 HETATM 3 C C AMQ . . . C 2 17.773 53.49 17.826 1 10.3 ? C AMQ 427 A 1 HETATM 4 O OT1 AMQ . . . C 2 18.619 53.369 16.911 1 12.15 ? OT1 AMQ 427 A 1 HETATM 5 O OT2 AMQ . . . C 2 16.532 53.462 17.662 1 12.13 ? OT2 AMQ 427 A 1 HETATM 6 C CB AMQ . . . C 2 17.659 54.85 19.982 1 10.64 ? CB AMQ 427 A 1 HETATM 7 C CG AMQ . . . C 2 17.924 54.934 21.466 1 11.45 ? CG AMQ 427 A 1 HETATM 8 C CD1 AMQ . . . C 2 17.208 54.294 22.519 1 12.01 ? CD1 AMQ 427 A 1 HETATM 9 C CD2 AMQ . . . C 2 18.938 55.51 22.159 1 11.66 ? CD2 AMQ 427 A 1 HETATM 10 C CE2 AMQ . . . C 2 20.089 56.386 21.78 1 10.52 ? CE2 AMQ 427 A 1 HETATM 11 O OE1 AMQ . . . C 2 16.068 53.698 22.176 1 13.65 ? OE1 AMQ 427 A 1 HETATM 12 N NE1 AMQ . . . C 2 17.668 54.394 23.741 1 12.19 ? NE1 AMQ 427 A 1 HETATM 13 O OE2 AMQ . . . C 2 18.837 55.215 23.509 1 9.82 ? OE2 AMQ 427 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #