data_1LB8
#
_model_server_result.job_id            xoo3SqLyg-Ddhzs6CxRE7g 
_model_server_result.datetime_utc      '2024-11-29 02:16:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1lb8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":428}' 
#
_entry.id    1LB8 
#
_exptl.entry_id    1LB8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              186.165 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(S)-ALPHA-AMINO-3-HYDROXY-5-METHYL-4-ISOXAZOLEPROPIONIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1LB8 
_cell.length_a            98.56 
_cell.length_b            121.376 
_cell.length_c            47.342 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1LB8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 206 A CYS 206 1_555 A SG CYS 261 A CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf2 B SG CYS 206 B CYS 206 1_555 B SG CYS 261 B CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
#
_chem_comp.formula           'C7 H10 N2 O4' 
_chem_comp.formula_weight    186.165 
_chem_comp.id                AMQ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(S)-ALPHA-AMINO-3-HYDROXY-5-METHYL-4-ISOXAZOLEPROPIONIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     AMPA 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA AMQ sing 13 n n 
N H AMQ sing 14 n n 
N HN2 AMQ sing 15 n n 
CA C AMQ sing 16 n n 
CA CB AMQ sing 17 n n 
CA HA AMQ sing 18 n n 
C OT1 AMQ doub 19 n n 
C OT2 AMQ sing 20 n n 
OT2 HXT AMQ sing 21 n n 
CB CG AMQ sing 22 n n 
CB HB1 AMQ sing 23 n n 
CB HB2 AMQ sing 24 n n 
CG CD1 AMQ sing 25 n y 
CG CD2 AMQ doub 26 n y 
CD1 OE1 AMQ sing 27 n n 
CD1 NE1 AMQ doub 28 n y 
CD2 CE2 AMQ sing 29 n n 
CD2 OE2 AMQ sing 30 n y 
CE2 HE21 AMQ sing 31 n n 
CE2 HE22 AMQ sing 32 n n 
CE2 HE23 AMQ sing 33 n n 
OE1 HE1 AMQ sing 34 n n 
NE1 OE2 AMQ sing 35 n y 
#
_atom_sites.entry_id                     1LB8 
_atom_sites.fract_transf_matrix[1][1]    0.010146 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008239 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.021123 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 AMQ A 1 427 427 AMQ AMP . 
D 2 AMQ B 1 428 428 AMQ AMP . 
E 3 HOH A 1 428 2 HOH TIP . 
E 3 HOH A 2 429 5 HOH TIP . 
E 3 HOH A 3 430 6 HOH TIP . 
E 3 HOH A 4 431 8 HOH TIP . 
E 3 HOH A 5 432 9 HOH TIP . 
E 3 HOH A 6 433 11 HOH TIP . 
E 3 HOH A 7 434 13 HOH TIP . 
E 3 HOH A 8 435 14 HOH TIP . 
E 3 HOH A 9 436 15 HOH TIP . 
E 3 HOH A 10 437 17 HOH TIP . 
E 3 HOH A 11 438 19 HOH TIP . 
E 3 HOH A 12 439 21 HOH TIP . 
E 3 HOH A 13 440 22 HOH TIP . 
E 3 HOH A 14 441 23 HOH TIP . 
E 3 HOH A 15 442 29 HOH TIP . 
E 3 HOH A 16 443 30 HOH TIP . 
E 3 HOH A 17 444 31 HOH TIP . 
E 3 HOH A 18 445 32 HOH TIP . 
E 3 HOH A 19 446 33 HOH TIP . 
E 3 HOH A 20 447 34 HOH TIP . 
E 3 HOH A 21 448 35 HOH TIP . 
E 3 HOH A 22 449 36 HOH TIP . 
E 3 HOH A 23 450 38 HOH TIP . 
E 3 HOH A 24 451 39 HOH TIP . 
E 3 HOH A 25 452 42 HOH TIP . 
E 3 HOH A 26 453 44 HOH TIP . 
E 3 HOH A 27 454 45 HOH TIP . 
E 3 HOH A 28 455 46 HOH TIP . 
E 3 HOH A 29 456 47 HOH TIP . 
E 3 HOH A 30 457 48 HOH TIP . 
E 3 HOH A 31 458 50 HOH TIP . 
E 3 HOH A 32 459 51 HOH TIP . 
E 3 HOH A 33 460 54 HOH TIP . 
E 3 HOH A 34 461 56 HOH TIP . 
E 3 HOH A 35 462 57 HOH TIP . 
E 3 HOH A 36 463 58 HOH TIP . 
E 3 HOH A 37 464 59 HOH TIP . 
E 3 HOH A 38 465 60 HOH TIP . 
E 3 HOH A 39 466 61 HOH TIP . 
E 3 HOH A 40 467 62 HOH TIP . 
E 3 HOH A 41 468 65 HOH TIP . 
E 3 HOH A 42 469 66 HOH TIP . 
E 3 HOH A 43 470 68 HOH TIP . 
E 3 HOH A 44 471 70 HOH TIP . 
E 3 HOH A 45 472 72 HOH TIP . 
E 3 HOH A 46 473 75 HOH TIP . 
E 3 HOH A 47 474 76 HOH TIP . 
E 3 HOH A 48 475 77 HOH TIP . 
E 3 HOH A 49 476 79 HOH TIP . 
E 3 HOH A 50 477 80 HOH TIP . 
E 3 HOH A 51 478 81 HOH TIP . 
E 3 HOH A 52 479 82 HOH TIP . 
E 3 HOH A 53 480 84 HOH TIP . 
E 3 HOH A 54 481 87 HOH TIP . 
E 3 HOH A 55 482 90 HOH TIP . 
E 3 HOH A 56 483 93 HOH TIP . 
E 3 HOH A 57 484 94 HOH TIP . 
E 3 HOH A 58 485 99 HOH TIP . 
E 3 HOH A 59 486 102 HOH TIP . 
E 3 HOH A 60 487 105 HOH TIP . 
E 3 HOH A 61 488 106 HOH TIP . 
E 3 HOH A 62 489 107 HOH TIP . 
E 3 HOH A 63 490 108 HOH TIP . 
E 3 HOH A 64 491 109 HOH TIP . 
E 3 HOH A 65 492 110 HOH TIP . 
E 3 HOH A 66 493 112 HOH TIP . 
E 3 HOH A 67 494 113 HOH TIP . 
E 3 HOH A 68 495 115 HOH TIP . 
E 3 HOH A 69 496 118 HOH TIP . 
E 3 HOH A 70 497 121 HOH TIP . 
E 3 HOH A 71 498 123 HOH TIP . 
E 3 HOH A 72 499 124 HOH TIP . 
E 3 HOH A 73 500 125 HOH TIP . 
E 3 HOH A 74 501 129 HOH TIP . 
E 3 HOH A 75 502 131 HOH TIP . 
E 3 HOH A 76 503 132 HOH TIP . 
E 3 HOH A 77 504 135 HOH TIP . 
E 3 HOH A 78 505 137 HOH TIP . 
E 3 HOH A 79 506 139 HOH TIP . 
E 3 HOH A 80 507 140 HOH TIP . 
E 3 HOH A 81 508 144 HOH TIP . 
E 3 HOH A 82 509 145 HOH TIP . 
E 3 HOH A 83 510 146 HOH TIP . 
E 3 HOH A 84 511 147 HOH TIP . 
E 3 HOH A 85 512 148 HOH TIP . 
E 3 HOH A 86 513 149 HOH TIP . 
E 3 HOH A 87 514 151 HOH TIP . 
E 3 HOH A 88 515 153 HOH TIP . 
E 3 HOH A 89 516 154 HOH TIP . 
E 3 HOH A 90 517 156 HOH TIP . 
E 3 HOH A 91 518 159 HOH TIP . 
E 3 HOH A 92 519 162 HOH TIP . 
E 3 HOH A 93 520 164 HOH TIP . 
E 3 HOH A 94 521 166 HOH TIP . 
E 3 HOH A 95 522 168 HOH TIP . 
E 3 HOH A 96 523 169 HOH TIP . 
E 3 HOH A 97 524 171 HOH TIP . 
E 3 HOH A 98 525 172 HOH TIP . 
E 3 HOH A 99 526 173 HOH TIP . 
E 3 HOH A 100 527 175 HOH TIP . 
E 3 HOH A 101 528 176 HOH TIP . 
E 3 HOH A 102 529 180 HOH TIP . 
E 3 HOH A 103 530 183 HOH TIP . 
E 3 HOH A 104 531 186 HOH TIP . 
E 3 HOH A 105 532 190 HOH TIP . 
E 3 HOH A 106 533 192 HOH TIP . 
E 3 HOH A 107 534 193 HOH TIP . 
E 3 HOH A 108 535 194 HOH TIP . 
E 3 HOH A 109 536 197 HOH TIP . 
E 3 HOH A 110 537 198 HOH TIP . 
E 3 HOH A 111 538 200 HOH TIP . 
E 3 HOH A 112 539 203 HOH TIP . 
E 3 HOH A 113 540 205 HOH TIP . 
E 3 HOH A 114 541 206 HOH TIP . 
E 3 HOH A 115 542 208 HOH TIP . 
E 3 HOH A 116 543 210 HOH TIP . 
E 3 HOH A 117 544 211 HOH TIP . 
E 3 HOH A 118 545 219 HOH TIP . 
E 3 HOH A 119 546 220 HOH TIP . 
E 3 HOH A 120 547 221 HOH TIP . 
E 3 HOH A 121 548 222 HOH TIP . 
E 3 HOH A 122 549 224 HOH TIP . 
F 3 HOH B 1 429 1 HOH TIP . 
F 3 HOH B 2 430 3 HOH TIP . 
F 3 HOH B 3 431 4 HOH TIP . 
F 3 HOH B 4 432 7 HOH TIP . 
F 3 HOH B 5 433 10 HOH TIP . 
F 3 HOH B 6 434 12 HOH TIP . 
F 3 HOH B 7 435 16 HOH TIP . 
F 3 HOH B 8 436 18 HOH TIP . 
F 3 HOH B 9 437 20 HOH TIP . 
F 3 HOH B 10 438 24 HOH TIP . 
F 3 HOH B 11 439 25 HOH TIP . 
F 3 HOH B 12 440 26 HOH TIP . 
F 3 HOH B 13 441 27 HOH TIP . 
F 3 HOH B 14 442 28 HOH TIP . 
F 3 HOH B 15 443 37 HOH TIP . 
F 3 HOH B 16 444 40 HOH TIP . 
F 3 HOH B 17 445 41 HOH TIP . 
F 3 HOH B 18 446 43 HOH TIP . 
F 3 HOH B 19 447 49 HOH TIP . 
F 3 HOH B 20 448 52 HOH TIP . 
F 3 HOH B 21 449 53 HOH TIP . 
F 3 HOH B 22 450 55 HOH TIP . 
F 3 HOH B 23 451 63 HOH TIP . 
F 3 HOH B 24 452 64 HOH TIP . 
F 3 HOH B 25 453 67 HOH TIP . 
F 3 HOH B 26 454 69 HOH TIP . 
F 3 HOH B 27 455 71 HOH TIP . 
F 3 HOH B 28 456 73 HOH TIP . 
F 3 HOH B 29 457 74 HOH TIP . 
F 3 HOH B 30 458 78 HOH TIP . 
F 3 HOH B 31 459 83 HOH TIP . 
F 3 HOH B 32 460 85 HOH TIP . 
F 3 HOH B 33 461 86 HOH TIP . 
F 3 HOH B 34 462 88 HOH TIP . 
F 3 HOH B 35 463 89 HOH TIP . 
F 3 HOH B 36 464 91 HOH TIP . 
F 3 HOH B 37 465 92 HOH TIP . 
F 3 HOH B 38 466 95 HOH TIP . 
F 3 HOH B 39 467 96 HOH TIP . 
F 3 HOH B 40 468 97 HOH TIP . 
F 3 HOH B 41 469 98 HOH TIP . 
F 3 HOH B 42 470 100 HOH TIP . 
F 3 HOH B 43 471 101 HOH TIP . 
F 3 HOH B 44 472 103 HOH TIP . 
F 3 HOH B 45 473 104 HOH TIP . 
F 3 HOH B 46 474 111 HOH TIP . 
F 3 HOH B 47 475 114 HOH TIP . 
F 3 HOH B 48 476 116 HOH TIP . 
F 3 HOH B 49 477 117 HOH TIP . 
F 3 HOH B 50 478 119 HOH TIP . 
F 3 HOH B 51 479 120 HOH TIP . 
F 3 HOH B 52 480 122 HOH TIP . 
F 3 HOH B 53 481 126 HOH TIP . 
F 3 HOH B 54 482 127 HOH TIP . 
F 3 HOH B 55 483 128 HOH TIP . 
F 3 HOH B 56 484 130 HOH TIP . 
F 3 HOH B 57 485 133 HOH TIP . 
F 3 HOH B 58 486 134 HOH TIP . 
F 3 HOH B 59 487 136 HOH TIP . 
F 3 HOH B 60 488 138 HOH TIP . 
F 3 HOH B 61 489 141 HOH TIP . 
F 3 HOH B 62 490 142 HOH TIP . 
F 3 HOH B 63 491 143 HOH TIP . 
F 3 HOH B 64 492 150 HOH TIP . 
F 3 HOH B 65 493 152 HOH TIP . 
F 3 HOH B 66 494 155 HOH TIP . 
F 3 HOH B 67 495 157 HOH TIP . 
F 3 HOH B 68 496 158 HOH TIP . 
F 3 HOH B 69 497 160 HOH TIP . 
F 3 HOH B 70 498 161 HOH TIP . 
F 3 HOH B 71 499 163 HOH TIP . 
F 3 HOH B 72 500 165 HOH TIP . 
F 3 HOH B 73 501 167 HOH TIP . 
F 3 HOH B 74 502 170 HOH TIP . 
F 3 HOH B 75 503 174 HOH TIP . 
F 3 HOH B 76 504 177 HOH TIP . 
F 3 HOH B 77 505 178 HOH TIP . 
F 3 HOH B 78 506 179 HOH TIP . 
F 3 HOH B 79 507 181 HOH TIP . 
F 3 HOH B 80 508 182 HOH TIP . 
F 3 HOH B 81 509 184 HOH TIP . 
F 3 HOH B 82 510 185 HOH TIP . 
F 3 HOH B 83 511 187 HOH TIP . 
F 3 HOH B 84 512 188 HOH TIP . 
F 3 HOH B 85 513 189 HOH TIP . 
F 3 HOH B 86 514 191 HOH TIP . 
F 3 HOH B 87 515 195 HOH TIP . 
F 3 HOH B 88 516 196 HOH TIP . 
F 3 HOH B 89 517 199 HOH TIP . 
F 3 HOH B 90 518 201 HOH TIP . 
F 3 HOH B 91 519 202 HOH TIP . 
F 3 HOH B 92 520 204 HOH TIP . 
F 3 HOH B 93 521 207 HOH TIP . 
F 3 HOH B 94 522 209 HOH TIP . 
F 3 HOH B 95 523 212 HOH TIP . 
F 3 HOH B 96 524 213 HOH TIP . 
F 3 HOH B 97 525 214 HOH TIP . 
F 3 HOH B 98 526 215 HOH TIP . 
F 3 HOH B 99 527 216 HOH TIP . 
F 3 HOH B 100 528 217 HOH TIP . 
F 3 HOH B 101 529 218 HOH TIP . 
F 3 HOH B 102 530 223 HOH TIP . 
F 3 HOH B 103 531 225 HOH TIP . 
F 3 HOH B 104 532 226 HOH TIP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N AMQ . . . D 2 39.194 34.801 19.528 1 12.98 ? N AMQ 428 B 1 
HETATM 2 C CA AMQ . . . D 2 40.7 34.831 19.417 1 13.89 ? CA AMQ 428 B 1 
HETATM 3 C C AMQ . . . D 2 41.161 34.943 17.935 1 12.15 ? C AMQ 428 B 1 
HETATM 4 O OT1 AMQ . . . D 2 42.386 35.031 17.719 1 13.59 ? OT1 AMQ 428 B 1 
HETATM 5 O OT2 AMQ . . . D 2 40.275 34.971 17.058 1 13.34 ? OT2 AMQ 428 B 1 
HETATM 6 C CB AMQ . . . D 2 41.295 33.564 20.059 1 13.99 ? CB AMQ 428 B 1 
HETATM 7 C CG AMQ . . . D 2 41.036 33.45 21.54 1 15.13 ? CG AMQ 428 B 1 
HETATM 8 C CD1 AMQ . . . D 2 41.75 34.085 22.599 1 15.83 ? CD1 AMQ 428 B 1 
HETATM 9 C CD2 AMQ . . . D 2 40.026 32.858 22.228 1 13.83 ? CD2 AMQ 428 B 1 
HETATM 10 C CE2 AMQ . . . D 2 38.857 32.011 21.841 1 11.95 ? CE2 AMQ 428 B 1 
HETATM 11 O OE1 AMQ . . . D 2 42.871 34.722 22.259 1 15.31 ? OE1 AMQ 428 B 1 
HETATM 12 N NE1 AMQ . . . D 2 41.296 33.958 23.819 1 17.53 ? NE1 AMQ 428 B 1 
HETATM 13 O OE2 AMQ . . . D 2 40.133 33.13 23.581 1 14.85 ? OE2 AMQ 428 B 1 
#
_model_server_stats.io_time_ms              57 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           292 
_model_server_stats.encode_time_ms          25 
_model_server_stats.element_count           13 
#