data_1LBL # _model_server_result.job_id QXbXq6g3BTMcpECmfV3VSg _model_server_result.datetime_utc '2024-11-13 11:08:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1lbl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":300}' # _entry.id 1LBL # _exptl.entry_id 1LBL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 351.246 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(O-CARBOXY-PHENYLAMINO)-1-DEOXY-D-RIBULOSE-5-PHOSPHATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1LBL _cell.length_a 57.9 _cell.length_b 73.8 _cell.length_c 104.2 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LBL _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H18 N O9 P' _chem_comp.formula_weight 351.246 _chem_comp.id 137 _chem_comp.mon_nstd_flag . _chem_comp.name 1-(O-CARBOXY-PHENYLAMINO)-1-DEOXY-D-RIBULOSE-5-PHOSPHATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1P 137 doub 1 n n P O2P 137 sing 2 n n P O3P 137 sing 3 n n P O5' 137 sing 4 n n O2P HOP2 137 sing 5 n n O3P HOP3 137 sing 6 n n O5' C5' 137 sing 7 n n C5' C4' 137 sing 8 n n C5' "H5'1" 137 sing 9 n n C5' "H5'2" 137 sing 10 n n C4' O4' 137 sing 11 n n C4' C3' 137 sing 12 n n C4' H4' 137 sing 13 n n O4' "HO'4" 137 sing 14 n n C3' O3' 137 sing 15 n n C3' C2' 137 sing 16 n n C3' H3' 137 sing 17 n n O3' "HO'3" 137 sing 18 n n C2' O2' 137 sing 19 n n C2' C1' 137 sing 20 n n C2' H2' 137 sing 21 n n O2' "HO'2" 137 sing 22 n n C1' NH 137 sing 23 n n C1' "H1'1" 137 sing 24 n n C1' "H1'2" 137 sing 25 n n NH C2 137 sing 26 n n NH HNH 137 sing 27 n n C1 C2 137 doub 28 n y C1 C6 137 sing 29 n y C1 C7 137 sing 30 n n C2 C3 137 sing 31 n y C3 C4 137 doub 32 n y C3 H3 137 sing 33 n n C4 C5 137 sing 34 n y C4 H4 137 sing 35 n n C5 C6 137 doub 36 n y C5 H5 137 sing 37 n n C6 H6 137 sing 38 n n C7 O71 137 sing 39 n n C7 O72 137 doub 40 n n O71 HO7 137 sing 41 n n # _atom_sites.entry_id 1LBL _atom_sites.fract_transf_matrix[1][1] 0.017271 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01355 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009597 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 137 A 1 300 300 137 CDR . C 3 HOH A 1 901 901 HOH HOH . C 3 HOH A 2 902 902 HOH HOH . C 3 HOH A 3 903 903 HOH HOH . C 3 HOH A 4 904 904 HOH HOH . C 3 HOH A 5 905 905 HOH HOH . C 3 HOH A 6 906 906 HOH HOH . C 3 HOH A 7 907 907 HOH HOH . C 3 HOH A 8 908 908 HOH HOH . C 3 HOH A 9 909 909 HOH HOH . C 3 HOH A 10 910 910 HOH HOH . C 3 HOH A 11 911 911 HOH HOH . C 3 HOH A 12 912 912 HOH HOH . C 3 HOH A 13 913 913 HOH HOH . C 3 HOH A 14 914 914 HOH HOH . C 3 HOH A 15 915 915 HOH HOH . C 3 HOH A 16 916 916 HOH HOH . C 3 HOH A 17 917 917 HOH HOH . C 3 HOH A 18 918 918 HOH HOH . C 3 HOH A 19 919 919 HOH HOH . C 3 HOH A 20 920 920 HOH HOH . C 3 HOH A 21 921 921 HOH HOH . C 3 HOH A 22 922 922 HOH HOH . C 3 HOH A 23 923 923 HOH HOH . C 3 HOH A 24 924 924 HOH HOH . C 3 HOH A 25 925 925 HOH HOH . C 3 HOH A 26 926 926 HOH HOH . C 3 HOH A 27 927 927 HOH HOH . C 3 HOH A 28 928 928 HOH HOH . C 3 HOH A 29 929 929 HOH HOH . C 3 HOH A 30 930 930 HOH HOH . C 3 HOH A 31 932 932 HOH HOH . C 3 HOH A 32 934 934 HOH HOH . C 3 HOH A 33 935 935 HOH HOH . C 3 HOH A 34 940 940 HOH HOH . C 3 HOH A 35 941 941 HOH HOH . C 3 HOH A 36 942 942 HOH HOH . C 3 HOH A 37 943 943 HOH HOH . C 3 HOH A 38 944 944 HOH HOH . C 3 HOH A 39 945 945 HOH HOH . C 3 HOH A 40 947 947 HOH HOH . C 3 HOH A 41 948 948 HOH HOH . C 3 HOH A 42 949 949 HOH HOH . C 3 HOH A 43 950 950 HOH HOH . C 3 HOH A 44 951 951 HOH HOH . C 3 HOH A 45 952 952 HOH HOH . C 3 HOH A 46 953 953 HOH HOH . C 3 HOH A 47 954 954 HOH HOH . C 3 HOH A 48 955 955 HOH HOH . C 3 HOH A 49 956 956 HOH HOH . C 3 HOH A 50 957 957 HOH HOH . C 3 HOH A 51 959 959 HOH HOH . C 3 HOH A 52 960 960 HOH HOH . C 3 HOH A 53 961 961 HOH HOH . C 3 HOH A 54 962 962 HOH HOH . C 3 HOH A 55 965 965 HOH HOH . C 3 HOH A 56 968 968 HOH HOH . C 3 HOH A 57 969 969 HOH HOH . C 3 HOH A 58 970 970 HOH HOH . C 3 HOH A 59 971 971 HOH HOH . C 3 HOH A 60 972 972 HOH HOH . C 3 HOH A 61 974 974 HOH HOH . C 3 HOH A 62 975 975 HOH HOH . C 3 HOH A 63 976 976 HOH HOH . C 3 HOH A 64 977 977 HOH HOH . C 3 HOH A 65 978 978 HOH HOH . C 3 HOH A 66 979 979 HOH HOH . C 3 HOH A 67 980 980 HOH HOH . C 3 HOH A 68 981 981 HOH HOH . C 3 HOH A 69 982 982 HOH HOH . C 3 HOH A 70 983 983 HOH HOH . C 3 HOH A 71 987 987 HOH HOH . C 3 HOH A 72 988 988 HOH HOH . C 3 HOH A 73 989 989 HOH HOH . C 3 HOH A 74 990 990 HOH HOH . C 3 HOH A 75 992 992 HOH HOH . C 3 HOH A 76 993 993 HOH HOH . C 3 HOH A 77 995 995 HOH HOH . C 3 HOH A 78 996 996 HOH HOH . C 3 HOH A 79 997 997 HOH HOH . C 3 HOH A 80 998 998 HOH HOH . C 3 HOH A 81 999 999 HOH HOH . C 3 HOH A 82 1000 1000 HOH HOH . C 3 HOH A 83 1004 1004 HOH HOH . C 3 HOH A 84 1008 1008 HOH HOH . C 3 HOH A 85 1009 1009 HOH HOH . C 3 HOH A 86 1010 1010 HOH HOH . C 3 HOH A 87 1012 1012 HOH HOH . C 3 HOH A 88 1013 1013 HOH HOH . C 3 HOH A 89 1017 1017 HOH HOH . C 3 HOH A 90 1018 1018 HOH HOH . C 3 HOH A 91 1020 1020 HOH HOH . C 3 HOH A 92 1023 1023 HOH HOH . C 3 HOH A 93 1024 1024 HOH HOH . C 3 HOH A 94 1026 1026 HOH HOH . C 3 HOH A 95 1027 1027 HOH HOH . C 3 HOH A 96 1028 1028 HOH HOH . C 3 HOH A 97 1029 1029 HOH HOH . C 3 HOH A 98 1031 1031 HOH HOH . C 3 HOH A 99 1032 1032 HOH HOH . C 3 HOH A 100 1033 1033 HOH HOH . C 3 HOH A 101 1034 1034 HOH HOH . C 3 HOH A 102 1036 1036 HOH HOH . C 3 HOH A 103 1038 1038 HOH HOH . C 3 HOH A 104 1042 1042 HOH HOH . C 3 HOH A 105 1043 1043 HOH HOH . C 3 HOH A 106 1051 1051 HOH HOH . C 3 HOH A 107 1053 1053 HOH HOH . C 3 HOH A 108 1054 1054 HOH HOH . C 3 HOH A 109 1055 1055 HOH HOH . C 3 HOH A 110 1056 1056 HOH HOH . C 3 HOH A 111 1057 1057 HOH HOH . C 3 HOH A 112 1059 1059 HOH HOH . C 3 HOH A 113 1060 1060 HOH HOH . C 3 HOH A 114 1061 1061 HOH HOH . C 3 HOH A 115 1062 1062 HOH HOH . C 3 HOH A 116 1063 1063 HOH HOH . C 3 HOH A 117 1064 1064 HOH HOH . C 3 HOH A 118 1066 1066 HOH HOH . C 3 HOH A 119 1069 1069 HOH HOH . C 3 HOH A 120 1070 1070 HOH HOH . C 3 HOH A 121 1072 1072 HOH HOH . C 3 HOH A 122 1085 1085 HOH HOH . C 3 HOH A 123 1089 1089 HOH HOH . C 3 HOH A 124 1090 1090 HOH HOH . C 3 HOH A 125 1091 1091 HOH HOH . C 3 HOH A 126 1092 1092 HOH HOH . C 3 HOH A 127 1095 1095 HOH HOH . C 3 HOH A 128 1096 1096 HOH HOH . C 3 HOH A 129 1099 1099 HOH HOH . C 3 HOH A 130 1100 1100 HOH HOH . C 3 HOH A 131 1101 1101 HOH HOH . C 3 HOH A 132 1102 1102 HOH HOH . C 3 HOH A 133 1103 1103 HOH HOH . C 3 HOH A 134 1106 1106 HOH HOH . C 3 HOH A 135 1113 1113 HOH HOH . C 3 HOH A 136 1116 1116 HOH HOH . C 3 HOH A 137 1117 1117 HOH HOH . C 3 HOH A 138 1118 1118 HOH HOH . C 3 HOH A 139 1119 1119 HOH HOH . C 3 HOH A 140 1120 1120 HOH HOH . C 3 HOH A 141 1121 1121 HOH HOH . C 3 HOH A 142 1122 1122 HOH HOH . C 3 HOH A 143 1123 1123 HOH HOH . C 3 HOH A 144 1124 1124 HOH HOH . C 3 HOH A 145 1125 1125 HOH HOH . C 3 HOH A 146 1126 1126 HOH HOH . C 3 HOH A 147 1128 1128 HOH HOH . C 3 HOH A 148 1129 1129 HOH HOH . C 3 HOH A 149 1133 1133 HOH HOH . C 3 HOH A 150 1134 1134 HOH HOH . C 3 HOH A 151 1137 1137 HOH HOH . C 3 HOH A 152 1138 1138 HOH HOH . C 3 HOH A 153 1140 1140 HOH HOH . C 3 HOH A 154 1142 1142 HOH HOH . C 3 HOH A 155 1143 1143 HOH HOH . C 3 HOH A 156 1146 1146 HOH HOH . C 3 HOH A 157 1147 1147 HOH HOH . C 3 HOH A 158 1163 1163 HOH HOH . C 3 HOH A 159 1165 1165 HOH HOH . C 3 HOH A 160 1172 1172 HOH HOH . C 3 HOH A 161 1174 1174 HOH HOH . C 3 HOH A 162 1175 1175 HOH HOH . C 3 HOH A 163 1180 1180 HOH HOH . C 3 HOH A 164 1190 1190 HOH HOH . C 3 HOH A 165 1192 1192 HOH HOH . C 3 HOH A 166 1193 1193 HOH HOH . C 3 HOH A 167 1194 1194 HOH HOH . C 3 HOH A 168 1195 1195 HOH HOH . C 3 HOH A 169 1196 1196 HOH HOH . C 3 HOH A 170 1200 1200 HOH HOH . C 3 HOH A 171 1201 1201 HOH HOH . C 3 HOH A 172 1208 1208 HOH HOH . C 3 HOH A 173 1212 1212 HOH HOH . C 3 HOH A 174 1213 1213 HOH HOH . C 3 HOH A 175 1214 1214 HOH HOH . C 3 HOH A 176 1218 1218 HOH HOH . C 3 HOH A 177 1219 1219 HOH HOH . C 3 HOH A 178 1220 1220 HOH HOH . C 3 HOH A 179 1221 1221 HOH HOH . C 3 HOH A 180 1222 1222 HOH HOH . C 3 HOH A 181 1223 1223 HOH HOH . C 3 HOH A 182 1224 1224 HOH HOH . C 3 HOH A 183 1225 1225 HOH HOH . C 3 HOH A 184 1226 1226 HOH HOH . C 3 HOH A 185 1227 1227 HOH HOH . C 3 HOH A 186 1228 1228 HOH HOH . C 3 HOH A 187 1229 1229 HOH HOH . C 3 HOH A 188 1231 1231 HOH HOH . C 3 HOH A 189 1233 1233 HOH HOH . C 3 HOH A 190 1234 1234 HOH HOH . C 3 HOH A 191 1236 1236 HOH HOH . C 3 HOH A 192 1237 1237 HOH HOH . C 3 HOH A 193 1238 1238 HOH HOH . C 3 HOH A 194 1239 1239 HOH HOH . C 3 HOH A 195 1241 1241 HOH HOH . C 3 HOH A 196 1242 1242 HOH HOH . C 3 HOH A 197 1244 1244 HOH HOH . C 3 HOH A 198 1245 1245 HOH HOH . C 3 HOH A 199 1246 1246 HOH HOH . C 3 HOH A 200 1247 1247 HOH HOH . C 3 HOH A 201 1248 1248 HOH HOH . C 3 HOH A 202 1249 1249 HOH HOH . C 3 HOH A 203 1250 1250 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P 137 . . . B 2 -6.427 -23.131 28.33 1 17.94 ? P 137 300 A 1 HETATM 2 O O1P 137 . . . B 2 -5.127 -23.073 27.677 1 12.47 ? O1P 137 300 A 1 HETATM 3 O O2P 137 . . . B 2 -7.538 -22.678 27.53 1 13.34 ? O2P 137 300 A 1 HETATM 4 O O3P 137 . . . B 2 -6.525 -24.486 28.765 1 18.38 ? O3P 137 300 A 1 HETATM 5 O O5' 137 . . . B 2 -6.386 -22.193 29.451 1 21.71 ? O5' 137 300 A 1 HETATM 6 C C5' 137 . . . B 2 -5.132 -22.043 30.182 1 36 ? C5' 137 300 A 1 HETATM 7 C C4' 137 . . . B 2 -5.226 -21.237 31.507 1 45.14 ? C4' 137 300 A 1 HETATM 8 O O4' 137 . . . B 2 -5.161 -19.803 31.232 1 40.3 ? O4' 137 300 A 1 HETATM 9 C C3' 137 . . . B 2 -6.452 -21.679 32.395 1 54.58 ? C3' 137 300 A 1 HETATM 10 O O3' 137 . . . B 2 -6.129 -22.753 33.315 1 47.03 ? O3' 137 300 A 1 HETATM 11 C C2' 137 . . . B 2 -7.039 -20.503 33.206 1 58.6 ? C2' 137 300 A 1 HETATM 12 O O2' 137 . . . B 2 -6.35 -19.524 33.573 1 60.78 ? O2' 137 300 A 1 HETATM 13 C C1' 137 . . . B 2 -8.484 -20.6 33.516 1 52.51 ? C1' 137 300 A 1 HETATM 14 N NH 137 . . . B 2 -9.003 -21.827 33.694 1 46.14 ? NH 137 300 A 1 HETATM 15 C C1 137 . . . B 2 -10.984 -23.168 33.042 1 37.35 ? C1 137 300 A 1 HETATM 16 C C2 137 . . . B 2 -10.438 -22.119 33.844 1 36.31 ? C2 137 300 A 1 HETATM 17 C C3 137 . . . B 2 -11.274 -21.371 34.671 1 31.51 ? C3 137 300 A 1 HETATM 18 C C4 137 . . . B 2 -12.65 -21.674 34.671 1 35.67 ? C4 137 300 A 1 HETATM 19 C C5 137 . . . B 2 -13.189 -22.695 33.871 1 31.38 ? C5 137 300 A 1 HETATM 20 C C6 137 . . . B 2 -12.376 -23.459 33.042 1 30.08 ? C6 137 300 A 1 HETATM 21 C C7 137 . . . B 2 -10.056 -23.989 32.236 1 37.7 ? C7 137 300 A 1 HETATM 22 O O71 137 . . . B 2 -8.814 -23.826 32.297 1 28.35 ? O71 137 300 A 1 HETATM 23 O O72 137 . . . B 2 -10.595 -24.848 31.539 1 46.23 ? O72 137 300 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 23 #