data_1LC7 # _model_server_result.job_id uj6Xewp0DtWopoQJlahwpA _model_server_result.datetime_utc '2024-11-13 10:29:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1lc7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":990}' # _entry.id 1LC7 # _exptl.entry_id 1LC7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 199.099 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHOSPHOTHREONINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1LC7 _cell.length_a 66.28 _cell.length_b 103.86 _cell.length_c 117.7 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LC7 _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -x+1,y,-z -1 0 0 0 1 0 0 0 -1 66.28 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H10 N O6 P' _chem_comp.formula_weight 199.099 _chem_comp.id TPO _chem_comp.mon_nstd_flag n _chem_comp.name PHOSPHOTHREONINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms PHOSPHONOTHREONINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA TPO sing 310 n n N H TPO sing 311 n n N H2 TPO sing 312 n n CA CB TPO sing 313 n n CA C TPO sing 314 n n CA HA TPO sing 315 n n CB CG2 TPO sing 316 n n CB OG1 TPO sing 317 n n CB HB TPO sing 318 n n CG2 HG21 TPO sing 319 n n CG2 HG22 TPO sing 320 n n CG2 HG23 TPO sing 321 n n OG1 P TPO sing 322 n n P O1P TPO doub 323 n n P O2P TPO sing 324 n n P O3P TPO sing 325 n n O2P HOP2 TPO sing 326 n n O3P HOP3 TPO sing 327 n n C O TPO doub 328 n n C OXT TPO sing 329 n n OXT HXT TPO sing 330 n n # _atom_sites.entry_id 1LC7 _atom_sites.fract_transf_matrix[1][1] 0.015088 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009628 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008496 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 800 800 PO4 PI . C 3 TPO A 1 990 990 TPO TPO . D 4 HOH A 1 1001 1001 HOH HOH . D 4 HOH A 2 1002 1002 HOH HOH . D 4 HOH A 3 1003 1003 HOH HOH . D 4 HOH A 4 1004 1004 HOH HOH . D 4 HOH A 5 1005 1005 HOH HOH . D 4 HOH A 6 1006 1006 HOH HOH . D 4 HOH A 7 1008 1008 HOH HOH . D 4 HOH A 8 1009 1009 HOH HOH . D 4 HOH A 9 1010 1010 HOH HOH . D 4 HOH A 10 1011 1011 HOH HOH . D 4 HOH A 11 1012 1012 HOH HOH . D 4 HOH A 12 1013 1013 HOH HOH . D 4 HOH A 13 1014 1014 HOH HOH . D 4 HOH A 14 1015 1015 HOH HOH . D 4 HOH A 15 1016 1016 HOH HOH . D 4 HOH A 16 1017 1017 HOH HOH . D 4 HOH A 17 1018 1018 HOH HOH . D 4 HOH A 18 1019 1019 HOH HOH . D 4 HOH A 19 1020 1020 HOH HOH . D 4 HOH A 20 1021 1021 HOH HOH . D 4 HOH A 21 1022 1022 HOH HOH . D 4 HOH A 22 1023 1023 HOH HOH . D 4 HOH A 23 1024 1024 HOH HOH . D 4 HOH A 24 1025 1025 HOH HOH . D 4 HOH A 25 1026 1026 HOH HOH . D 4 HOH A 26 1027 1027 HOH HOH . D 4 HOH A 27 1028 1028 HOH HOH . D 4 HOH A 28 1029 1029 HOH HOH . D 4 HOH A 29 1030 1030 HOH HOH . D 4 HOH A 30 1031 1031 HOH HOH . D 4 HOH A 31 1032 1032 HOH HOH . D 4 HOH A 32 1033 1033 HOH HOH . D 4 HOH A 33 1034 1034 HOH HOH . D 4 HOH A 34 1035 1035 HOH HOH . D 4 HOH A 35 1036 1036 HOH HOH . D 4 HOH A 36 1037 1037 HOH HOH . D 4 HOH A 37 1038 1038 HOH HOH . D 4 HOH A 38 1039 1039 HOH HOH . D 4 HOH A 39 1040 1040 HOH HOH . D 4 HOH A 40 1041 1041 HOH HOH . D 4 HOH A 41 1042 1042 HOH HOH . D 4 HOH A 42 1043 1043 HOH HOH . D 4 HOH A 43 1044 1044 HOH HOH . D 4 HOH A 44 1045 1045 HOH HOH . D 4 HOH A 45 1046 1046 HOH HOH . D 4 HOH A 46 1047 1047 HOH HOH . D 4 HOH A 47 1048 1048 HOH HOH . D 4 HOH A 48 1050 1050 HOH HOH . D 4 HOH A 49 1051 1051 HOH HOH . D 4 HOH A 50 1052 1052 HOH HOH . D 4 HOH A 51 1053 1053 HOH HOH . D 4 HOH A 52 1054 1054 HOH HOH . D 4 HOH A 53 1055 1055 HOH HOH . D 4 HOH A 54 1056 1056 HOH HOH . D 4 HOH A 55 1058 1058 HOH HOH . D 4 HOH A 56 1059 1059 HOH HOH . D 4 HOH A 57 1060 1060 HOH HOH . D 4 HOH A 58 1061 1061 HOH HOH . D 4 HOH A 59 1062 1062 HOH HOH . D 4 HOH A 60 1063 1063 HOH HOH . D 4 HOH A 61 1064 1064 HOH HOH . D 4 HOH A 62 1065 1065 HOH HOH . D 4 HOH A 63 1066 1066 HOH HOH . D 4 HOH A 64 1067 1067 HOH HOH . D 4 HOH A 65 1068 1068 HOH HOH . D 4 HOH A 66 1069 1069 HOH HOH . D 4 HOH A 67 1070 1070 HOH HOH . D 4 HOH A 68 1071 1071 HOH HOH . D 4 HOH A 69 1072 1072 HOH HOH . D 4 HOH A 70 1073 1073 HOH HOH . D 4 HOH A 71 1074 1074 HOH HOH . D 4 HOH A 72 1075 1075 HOH HOH . D 4 HOH A 73 1076 1076 HOH HOH . D 4 HOH A 74 1077 1077 HOH HOH . D 4 HOH A 75 1078 1078 HOH HOH . D 4 HOH A 76 1079 1079 HOH HOH . D 4 HOH A 77 1080 1080 HOH HOH . D 4 HOH A 78 1081 1081 HOH HOH . D 4 HOH A 79 1082 1082 HOH HOH . D 4 HOH A 80 1083 1083 HOH HOH . D 4 HOH A 81 1084 1084 HOH HOH . D 4 HOH A 82 1085 1085 HOH HOH . D 4 HOH A 83 1086 1086 HOH HOH . D 4 HOH A 84 1087 1087 HOH HOH . D 4 HOH A 85 1088 1088 HOH HOH . D 4 HOH A 86 1089 1089 HOH HOH . D 4 HOH A 87 1090 1090 HOH HOH . D 4 HOH A 88 1091 1091 HOH HOH . D 4 HOH A 89 1092 1092 HOH HOH . D 4 HOH A 90 1093 1093 HOH HOH . D 4 HOH A 91 1094 1094 HOH HOH . D 4 HOH A 92 1095 1095 HOH HOH . D 4 HOH A 93 1096 1096 HOH HOH . D 4 HOH A 94 1097 1097 HOH HOH . D 4 HOH A 95 1098 1098 HOH HOH . D 4 HOH A 96 1099 1099 HOH HOH . D 4 HOH A 97 1100 1100 HOH HOH . D 4 HOH A 98 1101 1101 HOH HOH . D 4 HOH A 99 1102 1102 HOH HOH . D 4 HOH A 100 1103 1103 HOH HOH . D 4 HOH A 101 1104 1104 HOH HOH . D 4 HOH A 102 1105 1105 HOH HOH . D 4 HOH A 103 1106 1106 HOH HOH . D 4 HOH A 104 1107 1107 HOH HOH . D 4 HOH A 105 1108 1108 HOH HOH . D 4 HOH A 106 1109 1109 HOH HOH . D 4 HOH A 107 1110 1110 HOH HOH . D 4 HOH A 108 1111 1111 HOH HOH . D 4 HOH A 109 1112 1112 HOH HOH . D 4 HOH A 110 1113 1113 HOH HOH . D 4 HOH A 111 1114 1114 HOH HOH . D 4 HOH A 112 1115 1115 HOH HOH . D 4 HOH A 113 1116 1116 HOH HOH . D 4 HOH A 114 1117 1117 HOH HOH . D 4 HOH A 115 1118 1118 HOH HOH . D 4 HOH A 116 1119 1119 HOH HOH . D 4 HOH A 117 1120 1120 HOH HOH . D 4 HOH A 118 1121 1121 HOH HOH . D 4 HOH A 119 1123 1123 HOH HOH . D 4 HOH A 120 1124 1124 HOH HOH . D 4 HOH A 121 1125 1125 HOH HOH . D 4 HOH A 122 1126 1126 HOH HOH . D 4 HOH A 123 1127 1127 HOH HOH . D 4 HOH A 124 1128 1128 HOH HOH . D 4 HOH A 125 1129 1129 HOH HOH . D 4 HOH A 126 1131 1131 HOH HOH . D 4 HOH A 127 1132 1132 HOH HOH . D 4 HOH A 128 1133 1133 HOH HOH . D 4 HOH A 129 1134 1134 HOH HOH . D 4 HOH A 130 1135 1135 HOH HOH . D 4 HOH A 131 1136 1136 HOH HOH . D 4 HOH A 132 1137 1137 HOH HOH . D 4 HOH A 133 1138 1138 HOH HOH . D 4 HOH A 134 1139 1139 HOH HOH . D 4 HOH A 135 1140 1140 HOH HOH . D 4 HOH A 136 1141 1141 HOH HOH . D 4 HOH A 137 1142 1142 HOH HOH . D 4 HOH A 138 1143 1143 HOH HOH . D 4 HOH A 139 1144 1144 HOH HOH . D 4 HOH A 140 1145 1145 HOH HOH . D 4 HOH A 141 1146 1146 HOH HOH . D 4 HOH A 142 1149 1149 HOH HOH . D 4 HOH A 143 1150 1150 HOH HOH . D 4 HOH A 144 1151 1151 HOH HOH . D 4 HOH A 145 1152 1152 HOH HOH . D 4 HOH A 146 1153 1153 HOH HOH . D 4 HOH A 147 1154 1154 HOH HOH . D 4 HOH A 148 1155 1155 HOH HOH . D 4 HOH A 149 1156 1156 HOH HOH . D 4 HOH A 150 1157 1157 HOH HOH . D 4 HOH A 151 1159 1159 HOH HOH . D 4 HOH A 152 1160 1160 HOH HOH . D 4 HOH A 153 1162 1162 HOH HOH . D 4 HOH A 154 1163 1163 HOH HOH . D 4 HOH A 155 1164 1164 HOH HOH . D 4 HOH A 156 1165 1165 HOH HOH . D 4 HOH A 157 1166 1166 HOH HOH . D 4 HOH A 158 1167 1167 HOH HOH . D 4 HOH A 159 1168 1168 HOH HOH . D 4 HOH A 160 1169 1169 HOH HOH . D 4 HOH A 161 1171 1171 HOH HOH . D 4 HOH A 162 1172 1172 HOH HOH . D 4 HOH A 163 1174 1174 HOH HOH . D 4 HOH A 164 1176 1176 HOH HOH . D 4 HOH A 165 1177 1177 HOH HOH . D 4 HOH A 166 1178 1178 HOH HOH . D 4 HOH A 167 1179 1179 HOH HOH . D 4 HOH A 168 1180 1180 HOH HOH . D 4 HOH A 169 1181 1181 HOH HOH . D 4 HOH A 170 1182 1182 HOH HOH . D 4 HOH A 171 1183 1183 HOH HOH . D 4 HOH A 172 1184 1184 HOH HOH . D 4 HOH A 173 1185 1185 HOH HOH . D 4 HOH A 174 1186 1186 HOH HOH . D 4 HOH A 175 1187 1187 HOH HOH . D 4 HOH A 176 1188 1188 HOH HOH . D 4 HOH A 177 1189 1189 HOH HOH . D 4 HOH A 178 1190 1190 HOH HOH . D 4 HOH A 179 1191 1191 HOH HOH . D 4 HOH A 180 1192 1192 HOH HOH . D 4 HOH A 181 1193 1193 HOH HOH . D 4 HOH A 182 1194 1194 HOH HOH . D 4 HOH A 183 1195 1195 HOH HOH . D 4 HOH A 184 1196 1196 HOH HOH . D 4 HOH A 185 1197 1197 HOH HOH . D 4 HOH A 186 1198 1198 HOH HOH . D 4 HOH A 187 1199 1199 HOH HOH . D 4 HOH A 188 1200 1200 HOH HOH . D 4 HOH A 189 1202 1202 HOH HOH . D 4 HOH A 190 1204 1204 HOH HOH . D 4 HOH A 191 1205 1205 HOH HOH . D 4 HOH A 192 1206 1206 HOH HOH . D 4 HOH A 193 1300 1300 HOH HOH . D 4 HOH A 194 1301 1301 HOH HOH . D 4 HOH A 195 1302 1302 HOH HOH . D 4 HOH A 196 1303 1303 HOH HOH . D 4 HOH A 197 1304 1304 HOH HOH . D 4 HOH A 198 1305 1305 HOH HOH . D 4 HOH A 199 1306 1306 HOH HOH . D 4 HOH A 200 1307 1307 HOH HOH . D 4 HOH A 201 1308 1308 HOH HOH . D 4 HOH A 202 1310 1310 HOH HOH . D 4 HOH A 203 1311 1311 HOH HOH . D 4 HOH A 204 1312 1312 HOH HOH . D 4 HOH A 205 1313 1313 HOH HOH . D 4 HOH A 206 1314 1314 HOH HOH . D 4 HOH A 207 1315 1315 HOH HOH . D 4 HOH A 208 1316 1316 HOH HOH . D 4 HOH A 209 1317 1317 HOH HOH . D 4 HOH A 210 1318 1318 HOH HOH . D 4 HOH A 211 1319 1319 HOH HOH . D 4 HOH A 212 1320 1320 HOH HOH . D 4 HOH A 213 1321 1321 HOH HOH . D 4 HOH A 214 1350 1350 HOH HOH . D 4 HOH A 215 1351 1351 HOH HOH . D 4 HOH A 216 1353 1353 HOH HOH . D 4 HOH A 217 1354 1354 HOH HOH . D 4 HOH A 218 1355 1355 HOH HOH . D 4 HOH A 219 1356 1356 HOH HOH . D 4 HOH A 220 1357 1357 HOH HOH . D 4 HOH A 221 1358 1358 HOH HOH . D 4 HOH A 222 1359 1359 HOH HOH . D 4 HOH A 223 1360 1360 HOH HOH . D 4 HOH A 224 1362 1362 HOH HOH . D 4 HOH A 225 1364 1364 HOH HOH . D 4 HOH A 226 1365 1365 HOH HOH . D 4 HOH A 227 1366 1366 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N TPO . . . C 3 26.179 28.359 14.771 1 41.75 ? N TPO 990 A 1 HETATM 2 C CA TPO . . . C 3 26.725 27.037 15.082 1 32.14 ? CA TPO 990 A 1 HETATM 3 C CB TPO . . . C 3 27.952 27.275 16.001 1 29.43 ? CB TPO 990 A 1 HETATM 4 C CG2 TPO . . . C 3 29.152 26.466 15.542 1 25.85 ? CG2 TPO 990 A 1 HETATM 5 O OG1 TPO . . . C 3 28.342 28.618 15.953 1 23.74 ? OG1 TPO 990 A 1 HETATM 6 P P TPO . . . C 3 28.033 29.502 17.283 1 22.9 ? P TPO 990 A 1 HETATM 7 O O1P TPO . . . C 3 28.698 30.921 17.033 1 26.12 ? O1P TPO 990 A 1 HETATM 8 O O2P TPO . . . C 3 28.667 28.722 18.518 1 23.22 ? O2P TPO 990 A 1 HETATM 9 O O3P TPO . . . C 3 26.471 29.6 17.343 1 21.68 ? O3P TPO 990 A 1 HETATM 10 C C TPO . . . C 3 25.742 26.198 15.862 1 38.76 ? C TPO 990 A 1 HETATM 11 O O TPO . . . C 3 26.024 24.967 16.061 1 27.64 ? O TPO 990 A 1 HETATM 12 O OXT TPO . . . C 3 24.662 26.707 16.341 1 46.2 ? OXT TPO 990 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #