data_1LCB # _model_server_result.job_id kS1G1tJawno2NnJEUmVwbA _model_server_result.datetime_utc '2024-11-27 03:10:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1lcb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":318}' # _entry.id 1LCB # _exptl.entry_id 1LCB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.413 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIHYDROFOLIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1LCB _cell.length_a 78.6 _cell.length_b 78.6 _cell.length_c 229.4 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LCB _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 11_554 -x+y,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 0 -114.7 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H21 N7 O6' _chem_comp.formula_weight 443.413 _chem_comp.id DHF _chem_comp.mon_nstd_flag . _chem_comp.name 'DIHYDROFOLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 DHF sing 83 n y N1 C8A DHF sing 84 n y N1 HN1 DHF sing 85 n n C2 NA2 DHF sing 86 n n C2 N3 DHF doub 87 n y NA2 HN21 DHF sing 88 n n NA2 HN22 DHF sing 89 n n N3 C4 DHF sing 90 n y C4 O4 DHF doub 91 n n C4 C4A DHF sing 92 n y C4A N5 DHF sing 93 n n C4A C8A DHF doub 94 n y N5 C6 DHF doub 95 n n C6 C7 DHF sing 96 n n C6 C9 DHF sing 97 n n C7 N8 DHF sing 98 n n C7 H71 DHF sing 99 n n C7 H72 DHF sing 100 n n N8 C8A DHF sing 101 n n N8 HN8 DHF sing 102 n n C9 N10 DHF sing 103 n n C9 H91 DHF sing 104 n n C9 H92 DHF sing 105 n n N10 C14 DHF sing 106 n n N10 HN0 DHF sing 107 n n C11 C12 DHF doub 108 n y C11 C16 DHF sing 109 n y C11 C DHF sing 110 n n C12 C13 DHF sing 111 n y C12 H12 DHF sing 112 n n C13 C14 DHF doub 113 n y C13 H13 DHF sing 114 n n C14 C15 DHF sing 115 n y C15 C16 DHF doub 116 n y C15 H15 DHF sing 117 n n C16 H16 DHF sing 118 n n C O DHF doub 119 n n C N DHF sing 120 n n N CA DHF sing 121 n n N HN DHF sing 122 n n CA CB DHF sing 123 n n CA CT DHF sing 124 n n CA HA DHF sing 125 n n CB CG DHF sing 126 n n CB HB1 DHF sing 127 n n CB HB2 DHF sing 128 n n CG CD DHF sing 129 n n CG HG1 DHF sing 130 n n CG HG2 DHF sing 131 n n CD OE1 DHF doub 132 n n CD OE2 DHF sing 133 n n OE2 HOE2 DHF sing 134 n n CT O1 DHF doub 135 n n CT O2 DHF sing 136 n n O2 HO2 DHF sing 137 n n # _atom_sites.entry_id 1LCB _atom_sites.fract_transf_matrix[1][1] 0.012723 _atom_sites.fract_transf_matrix[1][2] 0.007345 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014691 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004359 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TMP A 1 317 317 TMP TMP . C 3 DHF A 1 318 318 DHF DHF . D 4 HOH A 1 319 319 HOH HOH . D 4 HOH A 2 320 320 HOH HOH . D 4 HOH A 3 321 321 HOH HOH . D 4 HOH A 4 322 322 HOH HOH . D 4 HOH A 5 323 323 HOH HOH . D 4 HOH A 6 324 324 HOH HOH . D 4 HOH A 7 325 325 HOH HOH . D 4 HOH A 8 326 326 HOH HOH . D 4 HOH A 9 328 328 HOH HOH . D 4 HOH A 10 329 329 HOH HOH . D 4 HOH A 11 330 330 HOH HOH . D 4 HOH A 12 331 331 HOH HOH . D 4 HOH A 13 332 332 HOH HOH . D 4 HOH A 14 333 333 HOH HOH . D 4 HOH A 15 334 334 HOH HOH . D 4 HOH A 16 335 335 HOH HOH . D 4 HOH A 17 336 336 HOH HOH . D 4 HOH A 18 337 337 HOH HOH . D 4 HOH A 19 338 338 HOH HOH . D 4 HOH A 20 339 339 HOH HOH . D 4 HOH A 21 340 340 HOH HOH . D 4 HOH A 22 341 341 HOH HOH . D 4 HOH A 23 342 342 HOH HOH . D 4 HOH A 24 343 343 HOH HOH . D 4 HOH A 25 344 344 HOH HOH . D 4 HOH A 26 345 345 HOH HOH . D 4 HOH A 27 346 346 HOH HOH . D 4 HOH A 28 347 347 HOH HOH . D 4 HOH A 29 348 348 HOH HOH . D 4 HOH A 30 349 349 HOH HOH . D 4 HOH A 31 351 351 HOH HOH . D 4 HOH A 32 352 352 HOH HOH . D 4 HOH A 33 353 353 HOH HOH . D 4 HOH A 34 355 355 HOH HOH . D 4 HOH A 35 356 356 HOH HOH . D 4 HOH A 36 357 357 HOH HOH . D 4 HOH A 37 358 358 HOH HOH . D 4 HOH A 38 359 359 HOH HOH . D 4 HOH A 39 360 360 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 DHF . . . C 3 18.936 46.64 -52.437 1 2 ? N1 DHF 318 A 1 HETATM 2 C C2 DHF . . . C 3 18.813 45.311 -52.204 1 2 ? C2 DHF 318 A 1 HETATM 3 N NA2 DHF . . . C 3 19.443 44.463 -53.018 1 2 ? NA2 DHF 318 A 1 HETATM 4 N N3 DHF . . . C 3 18.312 44.883 -51.027 1 2 ? N3 DHF 318 A 1 HETATM 5 C C4 DHF . . . C 3 17.903 45.767 -50.044 1 2 ? C4 DHF 318 A 1 HETATM 6 O O4 DHF . . . C 3 17.669 45.275 -48.763 1 2 ? O4 DHF 318 A 1 HETATM 7 C C4A DHF . . . C 3 18.006 47.174 -50.313 1 2 ? C4A DHF 318 A 1 HETATM 8 N N5 DHF . . . C 3 17.14 48.041 -49.781 1 2 ? N5 DHF 318 A 1 HETATM 9 C C6 DHF . . . C 3 17.51 49.32 -49.847 1 2 ? C6 DHF 318 A 1 HETATM 10 C C7 DHF . . . C 3 18.01 49.83 -51.168 1 2 ? C7 DHF 318 A 1 HETATM 11 N N8 DHF . . . C 3 18.99 48.886 -51.773 1 2 ? N8 DHF 318 A 1 HETATM 12 C C8A DHF . . . C 3 18.66 47.576 -51.534 1 2 ? C8A DHF 318 A 1 HETATM 13 C C9 DHF . . . C 3 17.554 50.119 -48.611 1 2 ? C9 DHF 318 A 1 HETATM 14 N N10 DHF . . . C 3 16.714 49.549 -47.503 1 2 ? N10 DHF 318 A 1 HETATM 15 C C11 DHF . . . C 3 19.164 47.298 -44.923 1 2 ? C11 DHF 318 A 1 HETATM 16 C C12 DHF . . . C 3 18.104 46.722 -45.68 1 2 ? C12 DHF 318 A 1 HETATM 17 C C13 DHF . . . C 3 17.293 47.472 -46.539 1 2 ? C13 DHF 318 A 1 HETATM 18 C C14 DHF . . . C 3 17.55 48.858 -46.677 1 2 ? C14 DHF 318 A 1 HETATM 19 C C15 DHF . . . C 3 18.653 49.463 -45.98 1 2 ? C15 DHF 318 A 1 HETATM 20 C C16 DHF . . . C 3 19.455 48.696 -45.12 1 2 ? C16 DHF 318 A 1 HETATM 21 C C DHF . . . C 3 19.756 46.54 -43.784 1 8.05 ? C DHF 318 A 1 HETATM 22 O O DHF . . . C 3 20.412 47.134 -42.89 1 2 ? O DHF 318 A 1 HETATM 23 N N DHF . . . C 3 19.524 45.201 -43.631 1 8.05 ? N DHF 318 A 1 HETATM 24 C CA DHF . . . C 3 19.983 44.105 -44.577 1 8.05 ? CA DHF 318 A 1 HETATM 25 C CB DHF . . . C 3 21.305 43.394 -43.894 1 2 ? CB DHF 318 A 1 HETATM 26 C CG DHF . . . C 3 21.948 41.9 -44.033 1 2 ? CG DHF 318 A 1 HETATM 27 C CD DHF . . . C 3 23.524 41.787 -43.848 1 2 ? CD DHF 318 A 1 HETATM 28 O OE1 DHF . . . C 3 24.084 40.877 -43.164 1 2 ? OE1 DHF 318 A 1 HETATM 29 O OE2 DHF . . . C 3 24.221 42.634 -44.434 1 2 ? OE2 DHF 318 A 1 HETATM 30 C CT DHF . . . C 3 18.757 43.15 -44.85 1 2 ? CT DHF 318 A 1 HETATM 31 O O1 DHF . . . C 3 18.717 41.947 -44.519 1 2 ? O1 DHF 318 A 1 HETATM 32 O O2 DHF . . . C 3 17.775 43.637 -45.412 1 2 ? O2 DHF 318 A 1 HETATM 33 H HN21 DHF . . . C 3 18.739 43.857 -53.481 1 15 ? HN21 DHF 318 A 1 HETATM 34 H HN22 DHF . . . C 3 19.956 45.012 -53.734 1 15 ? HN22 DHF 318 A 1 HETATM 35 H HN8 DHF . . . C 3 19.173 49.068 -52.777 1 15 ? HN8 DHF 318 A 1 HETATM 36 H HN0 DHF . . . C 3 16.199 50.283 -46.985 1 15 ? HN0 DHF 318 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 36 #