data_1LCE
#
_model_server_result.job_id            rtY47lmwiLysRp3DSTQOFQ 
_model_server_result.datetime_utc      '2024-10-10 13:22:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1lce 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":318}' 
#
_entry.id    1LCE 
#
_exptl.entry_id    1LCE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              455.424 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '5,10-METHYLENE-6-HYDROFOLIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1LCE 
_cell.length_a            78.9 
_cell.length_b            78.9 
_cell.length_c            229.7 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1LCE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 11_554 -x+y,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 0 -114.85 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C20 H21 N7 O6' 
_chem_comp.formula_weight    455.424 
_chem_comp.id                TMF 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '5,10-METHYLENE-6-HYDROFOLIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 TMF sing 306 n y 
N1 C8A TMF sing 307 n y 
N1 HN1 TMF sing 308 n n 
C2 NA2 TMF sing 309 n n 
C2 N3 TMF doub 310 n y 
NA2 HN21 TMF sing 311 n n 
NA2 HN22 TMF sing 312 n n 
N3 C4 TMF sing 313 n y 
C4 O4 TMF doub 314 n n 
C4 C4A TMF sing 315 n y 
C4A N5 TMF sing 316 n n 
C4A C8A TMF doub 317 n y 
N5 C6 TMF sing 318 n n 
N5 CP1 TMF sing 319 n n 
C6 C7 TMF sing 320 n n 
C6 C9 TMF sing 321 n n 
C6 H6 TMF sing 322 n n 
C7 N8 TMF doub 323 n n 
C7 H7 TMF sing 324 n n 
N8 C8A TMF sing 325 n n 
C9 N10 TMF sing 326 n n 
C9 H91 TMF sing 327 n n 
C9 H92 TMF sing 328 n n 
N10 C14 TMF sing 329 n n 
N10 CP1 TMF sing 330 n n 
C11 C12 TMF doub 331 n y 
C11 C16 TMF sing 332 n y 
C11 C TMF sing 333 n n 
C12 C13 TMF sing 334 n y 
C12 H12 TMF sing 335 n n 
C13 C14 TMF doub 336 n y 
C13 H13 TMF sing 337 n n 
C14 C15 TMF sing 338 n y 
C15 C16 TMF doub 339 n y 
C15 H15 TMF sing 340 n n 
C16 H16 TMF sing 341 n n 
C O TMF doub 342 n n 
C N TMF sing 343 n n 
N CA TMF sing 344 n n 
N HN TMF sing 345 n n 
CA CB TMF sing 346 n n 
CA CT TMF sing 347 n n 
CA HA TMF sing 348 n n 
CB CG TMF sing 349 n n 
CB HB1 TMF sing 350 n n 
CB HB2 TMF sing 351 n n 
CG CD TMF sing 352 n n 
CG HG1 TMF sing 353 n n 
CG HG2 TMF sing 354 n n 
CD OE1 TMF doub 355 n n 
CD OE2 TMF sing 356 n n 
OE2 HOE2 TMF sing 357 n n 
CT O1 TMF doub 358 n n 
CT O2 TMF sing 359 n n 
O2 HO2 TMF sing 360 n n 
CP1 HCP1 TMF sing 361 n n 
CP1 HCP2 TMF sing 362 n n 
#
_atom_sites.entry_id                     1LCE 
_atom_sites.fract_transf_matrix[1][1]    0.012674 
_atom_sites.fract_transf_matrix[1][2]    0.007317 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014635 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004354 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 UMP A 1 317 317 UMP UMP . 
C 3 TMF A 1 318 318 TMF TMF . 
D 4 HOH A 1 319 319 HOH HOH . 
D 4 HOH A 2 321 321 HOH HOH . 
D 4 HOH A 3 323 323 HOH HOH . 
D 4 HOH A 4 325 325 HOH HOH . 
D 4 HOH A 5 326 326 HOH HOH . 
D 4 HOH A 6 328 328 HOH HOH . 
D 4 HOH A 7 329 329 HOH HOH . 
D 4 HOH A 8 330 330 HOH HOH . 
D 4 HOH A 9 331 331 HOH HOH . 
D 4 HOH A 10 332 332 HOH HOH . 
D 4 HOH A 11 333 333 HOH HOH . 
D 4 HOH A 12 334 334 HOH HOH . 
D 4 HOH A 13 335 335 HOH HOH . 
D 4 HOH A 14 338 338 HOH HOH . 
D 4 HOH A 15 339 339 HOH HOH . 
D 4 HOH A 16 340 340 HOH HOH . 
D 4 HOH A 17 341 341 HOH HOH . 
D 4 HOH A 18 342 342 HOH HOH . 
D 4 HOH A 19 343 343 HOH HOH . 
D 4 HOH A 20 344 344 HOH HOH . 
D 4 HOH A 21 345 345 HOH HOH . 
D 4 HOH A 22 346 346 HOH HOH . 
D 4 HOH A 23 347 347 HOH HOH . 
D 4 HOH A 24 348 348 HOH HOH . 
D 4 HOH A 25 349 349 HOH HOH . 
D 4 HOH A 26 350 350 HOH HOH . 
D 4 HOH A 27 351 351 HOH HOH . 
D 4 HOH A 28 352 352 HOH HOH . 
D 4 HOH A 29 355 355 HOH HOH . 
D 4 HOH A 30 358 358 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 TMF . . . C 3 14.797 51.333 -50.275 1 26.82 ? N1 TMF 318 A 1 
HETATM 2 C C2 TMF . . . C 3 13.611 51.4 -51.039 1 26.82 ? C2 TMF 318 A 1 
HETATM 3 N NA2 TMF . . . C 3 13.352 52.197 -52.1 1 26.82 ? NA2 TMF 318 A 1 
HETATM 4 N N3 TMF . . . C 3 12.533 50.611 -50.669 1 26.82 ? N3 TMF 318 A 1 
HETATM 5 C C4 TMF . . . C 3 12.702 49.672 -49.688 1 26.82 ? C4 TMF 318 A 1 
HETATM 6 O O4 TMF . . . C 3 12.088 48.333 -49.793 1 26.82 ? O4 TMF 318 A 1 
HETATM 7 C C4A TMF . . . C 3 13.619 50.132 -48.671 1 26.82 ? C4A TMF 318 A 1 
HETATM 8 N N5 TMF . . . C 3 13.282 50.048 -47.411 1 26.82 ? N5 TMF 318 A 1 
HETATM 9 C C6 TMF . . . C 3 14.212 50.826 -46.501 1 26.82 ? C6 TMF 318 A 1 
HETATM 10 C C7 TMF . . . C 3 15.686 51.239 -47.145 1 26.82 ? C7 TMF 318 A 1 
HETATM 11 N N8 TMF . . . C 3 15.946 50.527 -48.391 1 26.82 ? N8 TMF 318 A 1 
HETATM 12 C C8A TMF . . . C 3 14.829 50.676 -49.145 1 26.82 ? C8A TMF 318 A 1 
HETATM 13 C C9 TMF . . . C 3 14.251 49.952 -45.236 1 26.82 ? C9 TMF 318 A 1 
HETATM 14 N N10 TMF . . . C 3 14.342 48.649 -45.846 1 26.82 ? N10 TMF 318 A 1 
HETATM 15 C C11 TMF . . . C 3 17.688 46.397 -45.294 1 26.82 ? C11 TMF 318 A 1 
HETATM 16 C C12 TMF . . . C 3 16.434 46.075 -44.711 1 26.82 ? C12 TMF 318 A 1 
HETATM 17 C C13 TMF . . . C 3 15.292 46.816 -44.893 1 26.82 ? C13 TMF 318 A 1 
HETATM 18 C C14 TMF . . . C 3 15.429 47.915 -45.694 1 26.82 ? C14 TMF 318 A 1 
HETATM 19 C C15 TMF . . . C 3 16.664 48.271 -46.307 1 26.82 ? C15 TMF 318 A 1 
HETATM 20 C C16 TMF . . . C 3 17.827 47.518 -46.126 1 26.82 ? C16 TMF 318 A 1 
HETATM 21 C C TMF . . . C 3 18.813 45.528 -44.962 1 58.86 ? C TMF 318 A 1 
HETATM 22 O O TMF . . . C 3 19.962 46.008 -44.884 1 26.82 ? O TMF 318 A 1 
HETATM 23 N N TMF . . . C 3 18.455 44.18 -44.723 1 58.86 ? N TMF 318 A 1 
HETATM 24 C CA TMF . . . C 3 18.986 42.848 -45.262 1 58.86 ? CA TMF 318 A 1 
HETATM 25 C CB TMF . . . C 3 20.229 42.495 -44.472 1 26.82 ? CB TMF 318 A 1 
HETATM 26 C CG TMF . . . C 3 21.448 43.208 -44.937 1 26.82 ? CG TMF 318 A 1 
HETATM 27 C CD TMF . . . C 3 22.674 42.695 -44.181 1 26.82 ? CD TMF 318 A 1 
HETATM 28 O OE1 TMF . . . C 3 23.309 43.575 -43.512 1 26.82 ? OE1 TMF 318 A 1 
HETATM 29 O OE2 TMF . . . C 3 22.977 41.462 -44.286 1 26.82 ? OE2 TMF 318 A 1 
HETATM 30 C CT TMF . . . C 3 18.007 41.61 -45.307 1 26.82 ? CT TMF 318 A 1 
HETATM 31 O O1 TMF . . . C 3 16.799 41.756 -45.531 1 26.82 ? O1 TMF 318 A 1 
HETATM 32 O O2 TMF . . . C 3 18.398 40.46 -45.151 1 26.82 ? O2 TMF 318 A 1 
HETATM 33 C CP1 TMF . . . C 3 13.472 48.606 -47.015 1 26.82 ? CP1 TMF 318 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           282 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           33 
#