data_1LCU
#
_model_server_result.job_id            JRhtGBHEdYZyiry1eqSIqQ 
_model_server_result.datetime_utc      '2024-11-16 01:23:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1lcu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":390}' 
#
_entry.id    1LCU 
#
_exptl.entry_id    1LCU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1LCU 
_cell.length_a            101.456 
_cell.length_b            103.029 
_cell.length_c            126.958 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1LCU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 H N N 
? 4 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 370 A CYS 384 1_555 B SG CYS 370 B CYS 1384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
metalc ? metalc1 A N VAL 26 A VAL 40 1_555 F CA CA . A CA 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.144 ? 
metalc ? metalc2 A NE2 GLN 133 A GLN 147 1_555 C CA CA . A CA 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.278 ? 
metalc ? metalc3 H O1G ATP . A ATP 390 1_555 C CA CA . A CA 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.843 ? 
metalc ? metalc4 H O3G ATP . A ATP 390 1_555 C CA CA . A CA 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.007 ? 
metalc ? metalc5 H O2B ATP . A ATP 390 1_555 C CA CA . A CA 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? 
metalc ? metalc6 O O HOH . B HOH 5 1_555 J CA CA . B CA 1412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.81 ? 
metalc ? metalc7 O O HOH . B HOH 11 1_555 J CA CA . B CA 1412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.726 ? 
metalc ? metalc8 O O HOH . B HOH 21 1_555 J CA CA . B CA 1412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? 
metalc ? metalc9 L O2B ATP . B ATP 1390 1_555 J CA CA . B CA 1412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.63 ? 
metalc ? metalc10 L O3G ATP . B ATP 1390 1_555 J CA CA . B CA 1412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 70 n n 
PG O2G ATP sing 71 n n 
PG O3G ATP sing 72 n n 
PG O3B ATP sing 73 n n 
O2G HOG2 ATP sing 74 n n 
O3G HOG3 ATP sing 75 n n 
PB O1B ATP doub 76 n n 
PB O2B ATP sing 77 n n 
PB O3B ATP sing 78 n n 
PB O3A ATP sing 79 n n 
O2B HOB2 ATP sing 80 n n 
PA O1A ATP doub 81 n n 
PA O2A ATP sing 82 n n 
PA O3A ATP sing 83 n n 
PA O5' ATP sing 84 n n 
O2A HOA2 ATP sing 85 n n 
O5' C5' ATP sing 86 n n 
C5' C4' ATP sing 87 n n 
C5' "H5'1" ATP sing 88 n n 
C5' "H5'2" ATP sing 89 n n 
C4' O4' ATP sing 90 n n 
C4' C3' ATP sing 91 n n 
C4' H4' ATP sing 92 n n 
O4' C1' ATP sing 93 n n 
C3' O3' ATP sing 94 n n 
C3' C2' ATP sing 95 n n 
C3' H3' ATP sing 96 n n 
O3' HO3' ATP sing 97 n n 
C2' O2' ATP sing 98 n n 
C2' C1' ATP sing 99 n n 
C2' H2' ATP sing 100 n n 
O2' HO2' ATP sing 101 n n 
C1' N9 ATP sing 102 n n 
C1' H1' ATP sing 103 n n 
N9 C8 ATP sing 104 n y 
N9 C4 ATP sing 105 n y 
C8 N7 ATP doub 106 n y 
C8 H8 ATP sing 107 n n 
N7 C5 ATP sing 108 n y 
C5 C6 ATP sing 109 n y 
C5 C4 ATP doub 110 n y 
C6 N6 ATP sing 111 n n 
C6 N1 ATP doub 112 n y 
N6 HN61 ATP sing 113 n n 
N6 HN62 ATP sing 114 n n 
N1 C2 ATP sing 115 n y 
C2 N3 ATP doub 116 n y 
C2 H2 ATP sing 117 n n 
N3 C4 ATP sing 118 n y 
#
_atom_sites.entry_id                     1LCU 
_atom_sites.fract_transf_matrix[1][1]    0.009856 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009706 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007877 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CA A 1 412 412 CA CA . 
D 2 CA A 1 503 3 CA CA . 
E 3 CL A 1 506 6 CL CL1 . 
F 2 CA A 1 508 8 CA CA . 
G 3 CL A 1 512 12 CL CL1 . 
H 4 ATP A 1 390 390 ATP ATP . 
I 5 LAR A 1 411 411 LAR LAR . 
J 2 CA B 1 1412 1412 CA CA . 
K 3 CL B 1 507 7 CL CL1 . 
L 4 ATP B 1 1390 1390 ATP ATP . 
M 5 LAR B 1 1411 1411 LAR LAR . 
N 6 HOH A 1 513 10 HOH HOH . 
N 6 HOH A 2 514 5 HOH HOH . 
N 6 HOH A 3 515 1 HOH HOH . 
N 6 HOH A 4 516 3 HOH HOH . 
N 6 HOH A 5 517 7 HOH HOH . 
N 6 HOH A 6 518 9 HOH HOH . 
N 6 HOH A 7 519 12 HOH HOH . 
N 6 HOH A 8 520 13 HOH HOH . 
N 6 HOH A 9 521 14 HOH HOH . 
N 6 HOH A 10 522 22 HOH HOH . 
N 6 HOH A 11 523 27 HOH HOH . 
N 6 HOH A 12 524 28 HOH HOH . 
N 6 HOH A 13 525 30 HOH HOH . 
N 6 HOH A 14 526 32 HOH HOH . 
N 6 HOH A 15 527 33 HOH HOH . 
N 6 HOH A 16 528 35 HOH HOH . 
N 6 HOH A 17 529 39 HOH HOH . 
N 6 HOH A 18 530 40 HOH HOH . 
N 6 HOH A 19 531 42 HOH HOH . 
N 6 HOH A 20 532 43 HOH HOH . 
N 6 HOH A 21 533 44 HOH HOH . 
N 6 HOH A 22 534 45 HOH HOH . 
N 6 HOH A 23 535 46 HOH HOH . 
N 6 HOH A 24 536 50 HOH HOH . 
N 6 HOH A 25 537 51 HOH HOH . 
N 6 HOH A 26 538 52 HOH HOH . 
N 6 HOH A 27 539 53 HOH HOH . 
N 6 HOH A 28 540 54 HOH HOH . 
N 6 HOH A 29 541 58 HOH HOH . 
N 6 HOH A 30 542 63 HOH HOH . 
N 6 HOH A 31 543 65 HOH HOH . 
N 6 HOH A 32 544 66 HOH HOH . 
N 6 HOH A 33 545 67 HOH HOH . 
N 6 HOH A 34 546 68 HOH HOH . 
N 6 HOH A 35 547 70 HOH HOH . 
N 6 HOH A 36 548 71 HOH HOH . 
N 6 HOH A 37 549 72 HOH HOH . 
N 6 HOH A 38 550 76 HOH HOH . 
N 6 HOH A 39 551 77 HOH HOH . 
N 6 HOH A 40 552 78 HOH HOH . 
N 6 HOH A 41 553 79 HOH HOH . 
O 6 HOH B 1 2 2 HOH HOH . 
O 6 HOH B 2 4 4 HOH HOH . 
O 6 HOH B 3 5 5 HOH HOH . 
O 6 HOH B 4 6 6 HOH HOH . 
O 6 HOH B 5 8 8 HOH HOH . 
O 6 HOH B 6 10 10 HOH HOH . 
O 6 HOH B 7 11 11 HOH HOH . 
O 6 HOH B 8 15 15 HOH HOH . 
O 6 HOH B 9 16 16 HOH HOH . 
O 6 HOH B 10 17 17 HOH HOH . 
O 6 HOH B 11 18 18 HOH HOH . 
O 6 HOH B 12 19 19 HOH HOH . 
O 6 HOH B 13 20 20 HOH HOH . 
O 6 HOH B 14 21 21 HOH HOH . 
O 6 HOH B 15 23 23 HOH HOH . 
O 6 HOH B 16 24 24 HOH HOH . 
O 6 HOH B 17 25 25 HOH HOH . 
O 6 HOH B 18 26 26 HOH HOH . 
O 6 HOH B 19 29 29 HOH HOH . 
O 6 HOH B 20 31 31 HOH HOH . 
O 6 HOH B 21 34 34 HOH HOH . 
O 6 HOH B 22 36 36 HOH HOH . 
O 6 HOH B 23 37 37 HOH HOH . 
O 6 HOH B 24 38 38 HOH HOH . 
O 6 HOH B 25 41 41 HOH HOH . 
O 6 HOH B 26 47 47 HOH HOH . 
O 6 HOH B 27 48 48 HOH HOH . 
O 6 HOH B 28 49 49 HOH HOH . 
O 6 HOH B 29 55 55 HOH HOH . 
O 6 HOH B 30 56 56 HOH HOH . 
O 6 HOH B 31 57 57 HOH HOH . 
O 6 HOH B 32 59 59 HOH HOH . 
O 6 HOH B 33 60 60 HOH HOH . 
O 6 HOH B 34 61 61 HOH HOH . 
O 6 HOH B 35 62 62 HOH HOH . 
O 6 HOH B 36 64 64 HOH HOH . 
O 6 HOH B 37 69 69 HOH HOH . 
O 6 HOH B 38 73 73 HOH HOH . 
O 6 HOH B 39 74 74 HOH HOH . 
O 6 HOH B 40 75 75 HOH HOH . 
O 6 HOH B 41 80 80 HOH HOH . 
O 6 HOH B 42 501 1 HOH HOH . 
O 6 HOH B 43 509 9 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . H 4 6.302 70.884 72.143 1 15.36 ? PG ATP 390 A 1 
HETATM 2 O O1G ATP . . . H 4 6.553 71.568 70.833 1 13.58 ? O1G ATP 390 A 1 
HETATM 3 O O2G ATP . . . H 4 6.195 71.785 73.295 1 14.52 ? O2G ATP 390 A 1 
HETATM 4 O O3G ATP . . . H 4 5.141 69.985 72.031 1 15.69 ? O3G ATP 390 A 1 
HETATM 5 P PB ATP . . . H 4 8.123 68.789 71.688 1 12.42 ? PB ATP 390 A 1 
HETATM 6 O O1B ATP . . . H 4 9.36 68.284 72.133 1 13.95 ? O1B ATP 390 A 1 
HETATM 7 O O2B ATP . . . H 4 7.557 68.434 70.392 1 15.11 ? O2B ATP 390 A 1 
HETATM 8 O O3B ATP . . . H 4 7.494 69.942 72.511 1 12.05 ? O3B ATP 390 A 1 
HETATM 9 P PA ATP . . . H 4 6.993 66.188 72.154 1 12.69 ? PA ATP 390 A 1 
HETATM 10 O O1A ATP . . . H 4 5.613 65.941 71.884 1 12.3 ? O1A ATP 390 A 1 
HETATM 11 O O2A ATP . . . H 4 8.021 65.207 71.866 1 15 ? O2A ATP 390 A 1 
HETATM 12 O O3A ATP . . . H 4 7.428 67.606 72.63 1 10.52 ? O3A ATP 390 A 1 
HETATM 13 O O5' ATP . . . H 4 6.583 65.751 73.481 1 14.73 ? O5' ATP 390 A 1 
HETATM 14 C C5' ATP . . . H 4 6.733 65.47 74.717 1 18.54 ? C5' ATP 390 A 1 
HETATM 15 C C4' ATP . . . H 4 6.14 65.248 76.032 1 21.76 ? C4' ATP 390 A 1 
HETATM 16 O O4' ATP . . . H 4 5.287 64.089 75.952 1 23.93 ? O4' ATP 390 A 1 
HETATM 17 C C3' ATP . . . H 4 7.362 65.004 76.828 1 22.45 ? C3' ATP 390 A 1 
HETATM 18 O O3' ATP . . . H 4 7.775 66.124 77.581 1 21.79 ? O3' ATP 390 A 1 
HETATM 19 C C2' ATP . . . H 4 6.988 63.769 77.66 1 22.65 ? C2' ATP 390 A 1 
HETATM 20 O O2' ATP . . . H 4 6.783 64.128 79.011 1 23.76 ? O2' ATP 390 A 1 
HETATM 21 C C1' ATP . . . H 4 5.708 63.193 77.013 1 24.59 ? C1' ATP 390 A 1 
HETATM 22 N N9 ATP . . . H 4 5.814 61.842 76.535 1 26.53 ? N9 ATP 390 A 1 
HETATM 23 C C8 ATP . . . H 4 6.687 61.233 75.631 1 29.65 ? C8 ATP 390 A 1 
HETATM 24 N N7 ATP . . . H 4 6.46 59.957 75.469 1 31.25 ? N7 ATP 390 A 1 
HETATM 25 C C5 ATP . . . H 4 5.376 59.744 76.325 1 30.16 ? C5 ATP 390 A 1 
HETATM 26 C C6 ATP . . . H 4 4.554 58.524 76.69 1 31.24 ? C6 ATP 390 A 1 
HETATM 27 N N6 ATP . . . H 4 4.797 57.325 76.164 1 32.32 ? N6 ATP 390 A 1 
HETATM 28 N N1 ATP . . . H 4 3.517 58.691 77.609 1 31 ? N1 ATP 390 A 1 
HETATM 29 C C2 ATP . . . H 4 3.265 59.907 78.151 1 29.2 ? C2 ATP 390 A 1 
HETATM 30 N N3 ATP . . . H 4 3.929 61.058 77.904 1 27.35 ? N3 ATP 390 A 1 
HETATM 31 C C4 ATP . . . H 4 4.99 60.887 76.963 1 28.04 ? C4 ATP 390 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           261 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           31 
#