data_1LEV
#
_model_server_result.job_id            uavt1pngpgvJHcpTOj85wA 
_model_server_result.datetime_utc      '2024-11-04 20:23:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1lev 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":340}' 
#
_entry.id    1LEV 
#
_exptl.entry_id    1LEV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          106.3 
_cell.angle_gamma         90 
_cell.entry_id            1LEV 
_cell.length_a            118.87 
_cell.length_b            73.446 
_cell.length_c            78.025 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1LEV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 H N N 
? 3 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE1 GLU 97 A GLU 97 1_555 D MN MN . A MN 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? 
metalc ? metalc2 A OE2 GLU 97 A GLU 97 1_555 E MN MN . A MN 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.633 ? 
metalc ? metalc3 A OD2 ASP 118 A ASP 118 1_555 D MN MN . A MN 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? 
metalc ? metalc4 A OD1 ASP 118 A ASP 118 1_555 E MN MN . A MN 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? 
metalc ? metalc5 A OE2 GLU 280 A GLU 280 1_555 D MN MN . A MN 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? 
metalc ? metalc6 B OE1 GLU 97 F GLU 97 1_555 H MN MN . F MN 342 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? 
metalc ? metalc7 B OE2 GLU 97 F GLU 97 1_555 I MN MN . F MN 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? 
metalc ? metalc8 B OD2 ASP 118 F ASP 118 1_555 H MN MN . F MN 342 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? 
metalc ? metalc9 B OD1 ASP 118 F ASP 118 1_555 I MN MN . F MN 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? 
metalc ? metalc10 B OD1 ASP 121 F ASP 121 1_555 H MN MN . F MN 342 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? 
metalc ? metalc11 B OE2 GLU 280 F GLU 280 1_555 H MN MN . F MN 342 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1LEV 
_atom_sites.fract_transf_matrix[1][1]    0.008413 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00246 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013615 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013353 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 F6P A 1 338 336 F6P F6P . 
D 3 MN A 1 340 340 MN MN . 
E 3 MN A 1 341 341 MN MN . 
F 4 CLI A 1 342 338 CLI CLI . 
G 2 F6P F 1 338 337 F6P F6P . 
H 3 MN F 1 342 342 MN MN . 
I 3 MN F 1 343 343 MN MN . 
J 4 CLI F 1 339 339 CLI CLI . 
K 5 HOH A 1 343 3 HOH HOH . 
K 5 HOH A 2 344 4 HOH HOH . 
K 5 HOH A 3 345 7 HOH HOH . 
K 5 HOH A 4 346 8 HOH HOH . 
K 5 HOH A 5 347 9 HOH HOH . 
K 5 HOH A 6 348 10 HOH HOH . 
K 5 HOH A 7 349 12 HOH HOH . 
K 5 HOH A 8 350 15 HOH HOH . 
K 5 HOH A 9 351 19 HOH HOH . 
K 5 HOH A 10 352 21 HOH HOH . 
K 5 HOH A 11 353 24 HOH HOH . 
K 5 HOH A 12 354 25 HOH HOH . 
K 5 HOH A 13 355 26 HOH HOH . 
K 5 HOH A 14 356 29 HOH HOH . 
K 5 HOH A 15 357 30 HOH HOH . 
K 5 HOH A 16 358 31 HOH HOH . 
K 5 HOH A 17 359 32 HOH HOH . 
K 5 HOH A 18 360 33 HOH HOH . 
K 5 HOH A 19 361 34 HOH HOH . 
K 5 HOH A 20 362 37 HOH HOH . 
K 5 HOH A 21 363 38 HOH HOH . 
K 5 HOH A 22 364 39 HOH HOH . 
K 5 HOH A 23 365 40 HOH HOH . 
K 5 HOH A 24 366 41 HOH HOH . 
K 5 HOH A 25 367 42 HOH HOH . 
K 5 HOH A 26 368 45 HOH HOH . 
K 5 HOH A 27 369 46 HOH HOH . 
K 5 HOH A 28 370 49 HOH HOH . 
K 5 HOH A 29 371 50 HOH HOH . 
K 5 HOH A 30 372 54 HOH HOH . 
K 5 HOH A 31 373 55 HOH HOH . 
K 5 HOH A 32 374 56 HOH HOH . 
K 5 HOH A 33 375 59 HOH HOH . 
K 5 HOH A 34 376 61 HOH HOH . 
K 5 HOH A 35 377 62 HOH HOH . 
K 5 HOH A 36 378 64 HOH HOH . 
K 5 HOH A 37 379 65 HOH HOH . 
K 5 HOH A 38 380 66 HOH HOH . 
K 5 HOH A 39 381 67 HOH HOH . 
K 5 HOH A 40 382 68 HOH HOH . 
K 5 HOH A 41 383 72 HOH HOH . 
K 5 HOH A 42 384 73 HOH HOH . 
K 5 HOH A 43 385 74 HOH HOH . 
K 5 HOH A 44 386 75 HOH HOH . 
K 5 HOH A 45 387 77 HOH HOH . 
K 5 HOH A 46 388 78 HOH HOH . 
K 5 HOH A 47 389 79 HOH HOH . 
K 5 HOH A 48 390 80 HOH HOH . 
K 5 HOH A 49 391 82 HOH HOH . 
K 5 HOH A 50 392 85 HOH HOH . 
K 5 HOH A 51 393 86 HOH HOH . 
K 5 HOH A 52 394 88 HOH HOH . 
K 5 HOH A 53 395 92 HOH HOH . 
K 5 HOH A 54 396 93 HOH HOH . 
K 5 HOH A 55 397 94 HOH HOH . 
K 5 HOH A 56 398 95 HOH HOH . 
K 5 HOH A 57 399 96 HOH HOH . 
K 5 HOH A 58 400 101 HOH HOH . 
K 5 HOH A 59 401 102 HOH HOH . 
K 5 HOH A 60 402 103 HOH HOH . 
K 5 HOH A 61 403 108 HOH HOH . 
K 5 HOH A 62 404 109 HOH HOH . 
K 5 HOH A 63 405 110 HOH HOH . 
L 5 HOH F 1 344 1 HOH HOH . 
L 5 HOH F 2 345 5 HOH HOH . 
L 5 HOH F 3 346 6 HOH HOH . 
L 5 HOH F 4 347 11 HOH HOH . 
L 5 HOH F 5 348 14 HOH HOH . 
L 5 HOH F 6 349 16 HOH HOH . 
L 5 HOH F 7 350 17 HOH HOH . 
L 5 HOH F 8 351 18 HOH HOH . 
L 5 HOH F 9 352 20 HOH HOH . 
L 5 HOH F 10 353 22 HOH HOH . 
L 5 HOH F 11 354 23 HOH HOH . 
L 5 HOH F 12 355 27 HOH HOH . 
L 5 HOH F 13 356 28 HOH HOH . 
L 5 HOH F 14 357 35 HOH HOH . 
L 5 HOH F 15 358 36 HOH HOH . 
L 5 HOH F 16 359 43 HOH HOH . 
L 5 HOH F 17 360 47 HOH HOH . 
L 5 HOH F 18 361 48 HOH HOH . 
L 5 HOH F 19 362 51 HOH HOH . 
L 5 HOH F 20 363 52 HOH HOH . 
L 5 HOH F 21 364 53 HOH HOH . 
L 5 HOH F 22 365 57 HOH HOH . 
L 5 HOH F 23 366 58 HOH HOH . 
L 5 HOH F 24 367 60 HOH HOH . 
L 5 HOH F 25 368 63 HOH HOH . 
L 5 HOH F 26 369 70 HOH HOH . 
L 5 HOH F 27 370 71 HOH HOH . 
L 5 HOH F 28 371 76 HOH HOH . 
L 5 HOH F 29 372 81 HOH HOH . 
L 5 HOH F 30 373 83 HOH HOH . 
L 5 HOH F 31 374 84 HOH HOH . 
L 5 HOH F 32 375 87 HOH HOH . 
L 5 HOH F 33 376 89 HOH HOH . 
L 5 HOH F 34 377 90 HOH HOH . 
L 5 HOH F 35 378 91 HOH HOH . 
L 5 HOH F 36 379 97 HOH HOH . 
L 5 HOH F 37 380 98 HOH HOH . 
L 5 HOH F 38 381 100 HOH HOH . 
L 5 HOH F 39 382 104 HOH HOH . 
L 5 HOH F 40 383 106 HOH HOH . 
L 5 HOH F 41 384 111 HOH HOH . 
L 5 HOH F 42 385 113 HOH HOH . 
L 5 HOH F 43 386 114 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MN 
_atom_site.label_atom_id         MN 
_atom_site.label_comp_id         MN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               9.819 
_atom_site.Cartn_y               -11.673 
_atom_site.Cartn_z               23.978 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        38.03 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MN 
_atom_site.auth_comp_id          MN 
_atom_site.auth_seq_id           340 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           244 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           1 
#