data_1LHC # _model_server_result.job_id uXO6hXNzcNCcYClCxt0PXg _model_server_result.datetime_utc '2024-11-16 10:58:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1lhc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":400}' # _entry.id 1LHC # _exptl.entry_id 1LHC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 460.335 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description AC-(D)PHE-PRO-BOROARG-OH _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.6 _cell.angle_gamma 90 _cell.entry_id 1LHC _cell.length_a 70.8 _cell.length_b 72.3 _cell.length_c 72.6 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LHC _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 9 L CYS 1 1_555 B SG CYS 119 H CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? disulf ? disulf2 B SG CYS 28 H CYS 42 1_555 B SG CYS 44 H CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? disulf ? disulf3 B SG CYS 173 H CYS 168 1_555 B SG CYS 187 H CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? disulf ? disulf4 B SG CYS 201 H CYS 191 1_555 B SG CYS 231 H CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? covale ? covale1 B OG SER 205 H SER 195 1_555 D B2 DP7 . H DP7 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.554 ? # _chem_comp.formula 'C21 H33 B N6 O5' _chem_comp.formula_weight 460.335 _chem_comp.id DP7 _chem_comp.mon_nstd_flag . _chem_comp.name AC-(D)PHE-PRO-BOROARG-OH _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 B2 DP7 sing 83 n n C1 C3 DP7 sing 84 n n C1 N1 DP7 sing 85 n n C1 H1 DP7 sing 86 n n B2 O1 DP7 sing 87 n n B2 O2 DP7 sing 88 n n C3 C4 DP7 sing 89 n n C3 H31 DP7 sing 90 n n C3 H32 DP7 sing 91 n n C4 C5 DP7 sing 92 n n C4 H41 DP7 sing 93 n n C4 H42 DP7 sing 94 n n C5 N2 DP7 sing 95 n n C5 H51 DP7 sing 96 n n C5 H52 DP7 sing 97 n n C6 N2 DP7 sing 98 n n C6 N3 DP7 sing 99 n n C6 N4 DP7 doub 100 z n C7 C8 DP7 sing 101 n n C7 C9 DP7 sing 102 n n C7 N5 DP7 sing 103 n n C7 H7 DP7 sing 104 n n C8 N1 DP7 sing 105 n n C8 O3 DP7 doub 106 n n C9 C10 DP7 sing 107 n n C9 H91 DP7 sing 108 n n C9 H92 DP7 sing 109 n n C10 C11 DP7 sing 110 n n C10 H101 DP7 sing 111 n n C10 H102 DP7 sing 112 n n C11 N5 DP7 sing 113 n n C11 H111 DP7 sing 114 n n C11 H112 DP7 sing 115 n n C12 C14 DP7 sing 116 n n C12 N5 DP7 sing 117 n n C12 O4 DP7 doub 118 n n C13 C14 DP7 sing 119 n n C13 C21 DP7 sing 120 n n C13 H131 DP7 sing 121 n n C13 H132 DP7 sing 122 n n C14 N6 DP7 sing 123 n n C14 H14 DP7 sing 124 n n C15 C16 DP7 sing 125 n n C15 N6 DP7 sing 126 n n C15 O5 DP7 doub 127 n n C16 H161 DP7 sing 128 n n C16 H162 DP7 sing 129 n n C16 H163 DP7 sing 130 n n C17 C18 DP7 doub 131 n y C17 C22 DP7 sing 132 n y C17 H17 DP7 sing 133 n n C18 C19 DP7 sing 134 n y C18 H18 DP7 sing 135 n n C19 C20 DP7 doub 136 n y C19 H19 DP7 sing 137 n n C20 C21 DP7 sing 138 n y C20 H20 DP7 sing 139 n n C21 C22 DP7 doub 140 n y C22 H22 DP7 sing 141 n n N1 HN1 DP7 sing 142 n n N2 HN2 DP7 sing 143 n n N3 HN31 DP7 sing 144 n n N3 HN32 DP7 sing 145 n n N4 HN4 DP7 sing 146 n n N6 HN6 DP7 sing 147 n n O1 HO1 DP7 sing 148 n n O2 HO2 DP7 sing 149 n n # _atom_sites.entry_id 1LHC _atom_sites.fract_transf_matrix[1][1] 0.014124 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002643 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013831 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014013 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 DP7 H 1 400 400 DP7 DP7 . E 5 HOH L 1 503 503 HOH HOH . E 5 HOH L 2 513 513 HOH HOH . E 5 HOH L 3 515 515 HOH HOH . E 5 HOH L 4 541 541 HOH HOH . E 5 HOH L 5 555 555 HOH HOH . E 5 HOH L 6 560 560 HOH HOH . E 5 HOH L 7 591 591 HOH HOH . E 5 HOH L 8 593 593 HOH HOH . E 5 HOH L 9 595 595 HOH HOH . E 5 HOH L 10 602 602 HOH HOH . E 5 HOH L 11 636 636 HOH HOH . E 5 HOH L 12 647 647 HOH HOH . F 5 HOH H 1 501 501 HOH HOH . F 5 HOH H 2 502 502 HOH HOH . F 5 HOH H 3 504 504 HOH HOH . F 5 HOH H 4 505 505 HOH HOH . F 5 HOH H 5 506 506 HOH HOH . F 5 HOH H 6 507 507 HOH HOH . F 5 HOH H 7 508 508 HOH HOH . F 5 HOH H 8 510 510 HOH HOH . F 5 HOH H 9 511 511 HOH HOH . F 5 HOH H 10 512 512 HOH HOH . F 5 HOH H 11 514 514 HOH HOH . F 5 HOH H 12 517 517 HOH HOH . F 5 HOH H 13 519 519 HOH HOH . F 5 HOH H 14 521 521 HOH HOH . F 5 HOH H 15 522 522 HOH HOH . F 5 HOH H 16 523 523 HOH HOH . F 5 HOH H 17 524 524 HOH HOH . F 5 HOH H 18 527 527 HOH HOH . F 5 HOH H 19 528 528 HOH HOH . F 5 HOH H 20 532 532 HOH HOH . F 5 HOH H 21 533 533 HOH HOH . F 5 HOH H 22 534 534 HOH HOH . F 5 HOH H 23 535 535 HOH HOH . F 5 HOH H 24 537 537 HOH HOH . F 5 HOH H 25 538 538 HOH HOH . F 5 HOH H 26 539 539 HOH HOH . F 5 HOH H 27 544 544 HOH HOH . F 5 HOH H 28 545 545 HOH HOH . F 5 HOH H 29 548 548 HOH HOH . F 5 HOH H 30 550 550 HOH HOH . F 5 HOH H 31 551 551 HOH HOH . F 5 HOH H 32 552 552 HOH HOH . F 5 HOH H 33 554 554 HOH HOH . F 5 HOH H 34 556 556 HOH HOH . F 5 HOH H 35 558 558 HOH HOH . F 5 HOH H 36 559 559 HOH HOH . F 5 HOH H 37 561 561 HOH HOH . F 5 HOH H 38 562 562 HOH HOH . F 5 HOH H 39 563 563 HOH HOH . F 5 HOH H 40 564 564 HOH HOH . F 5 HOH H 41 565 565 HOH HOH . F 5 HOH H 42 566 566 HOH HOH . F 5 HOH H 43 568 568 HOH HOH . F 5 HOH H 44 569 569 HOH HOH . F 5 HOH H 45 570 570 HOH HOH . F 5 HOH H 46 571 571 HOH HOH . F 5 HOH H 47 572 572 HOH HOH . F 5 HOH H 48 573 573 HOH HOH . F 5 HOH H 49 574 574 HOH HOH . F 5 HOH H 50 575 575 HOH HOH . F 5 HOH H 51 576 576 HOH HOH . F 5 HOH H 52 577 577 HOH HOH . F 5 HOH H 53 578 578 HOH HOH . F 5 HOH H 54 579 579 HOH HOH . F 5 HOH H 55 580 580 HOH HOH . F 5 HOH H 56 581 581 HOH HOH . F 5 HOH H 57 582 582 HOH HOH . F 5 HOH H 58 583 583 HOH HOH . F 5 HOH H 59 584 584 HOH HOH . F 5 HOH H 60 585 585 HOH HOH . F 5 HOH H 61 586 586 HOH HOH . F 5 HOH H 62 587 587 HOH HOH . F 5 HOH H 63 588 588 HOH HOH . F 5 HOH H 64 589 589 HOH HOH . F 5 HOH H 65 590 590 HOH HOH . F 5 HOH H 66 594 594 HOH HOH . F 5 HOH H 67 596 596 HOH HOH . F 5 HOH H 68 598 598 HOH HOH . F 5 HOH H 69 599 599 HOH HOH . F 5 HOH H 70 600 600 HOH HOH . F 5 HOH H 71 601 601 HOH HOH . F 5 HOH H 72 603 603 HOH HOH . F 5 HOH H 73 604 604 HOH HOH . F 5 HOH H 74 605 605 HOH HOH . F 5 HOH H 75 609 609 HOH HOH . F 5 HOH H 76 610 610 HOH HOH . F 5 HOH H 77 611 611 HOH HOH . F 5 HOH H 78 613 613 HOH HOH . F 5 HOH H 79 614 614 HOH HOH . F 5 HOH H 80 615 615 HOH HOH . F 5 HOH H 81 616 616 HOH HOH . F 5 HOH H 82 617 617 HOH HOH . F 5 HOH H 83 620 620 HOH HOH . F 5 HOH H 84 621 621 HOH HOH . F 5 HOH H 85 622 622 HOH HOH . F 5 HOH H 86 623 623 HOH HOH . F 5 HOH H 87 624 624 HOH HOH . F 5 HOH H 88 625 625 HOH HOH . F 5 HOH H 89 626 626 HOH HOH . F 5 HOH H 90 627 627 HOH HOH . F 5 HOH H 91 628 628 HOH HOH . F 5 HOH H 92 629 629 HOH HOH . F 5 HOH H 93 630 630 HOH HOH . F 5 HOH H 94 631 631 HOH HOH . F 5 HOH H 95 634 634 HOH HOH . F 5 HOH H 96 635 635 HOH HOH . F 5 HOH H 97 637 637 HOH HOH . F 5 HOH H 98 638 638 HOH HOH . F 5 HOH H 99 639 639 HOH HOH . F 5 HOH H 100 640 640 HOH HOH . F 5 HOH H 101 641 641 HOH HOH . F 5 HOH H 102 643 643 HOH HOH . F 5 HOH H 103 644 644 HOH HOH . F 5 HOH H 104 645 645 HOH HOH . F 5 HOH H 105 646 646 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DP7 . . . D 4 14.92 -11.605 19.624 1 25.68 ? C1 DP7 400 H 1 HETATM 2 B B2 DP7 . . . D 4 15.152 -10.778 18.321 1 25.4 ? B2 DP7 400 H 1 HETATM 3 C C3 DP7 . . . D 4 13.868 -10.977 20.578 1 25.06 ? C3 DP7 400 H 1 HETATM 4 C C4 DP7 . . . D 4 13.024 -11.96 21.387 1 24.36 ? C4 DP7 400 H 1 HETATM 5 C C5 DP7 . . . D 4 12.46 -11.372 22.658 1 24.01 ? C5 DP7 400 H 1 HETATM 6 C C6 DP7 . . . D 4 10.687 -12.055 24.408 1 23.4 ? C6 DP7 400 H 1 HETATM 7 C C7 DP7 . . . D 4 18.149 -13.13 21.224 1 26.99 ? C7 DP7 400 H 1 HETATM 8 C C8 DP7 . . . D 4 16.813 -12.965 20.43 1 26.53 ? C8 DP7 400 H 1 HETATM 9 C C9 DP7 . . . D 4 19.361 -13.057 20.279 1 27.16 ? C9 DP7 400 H 1 HETATM 10 C C10 DP7 . . . D 4 20.042 -14.422 20.284 1 27.35 ? C10 DP7 400 H 1 HETATM 11 C C11 DP7 . . . D 4 19.481 -15.175 21.41 1 27.24 ? C11 DP7 400 H 1 HETATM 12 C C12 DP7 . . . D 4 17.453 -14.893 22.866 1 27.57 ? C12 DP7 400 H 1 HETATM 13 C C13 DP7 . . . D 4 18.153 -16.147 25.063 1 28.23 ? C13 DP7 400 H 1 HETATM 14 C C14 DP7 . . . D 4 17.61 -16.278 23.595 1 28.11 ? C14 DP7 400 H 1 HETATM 15 C C15 DP7 . . . D 4 15.802 -17.859 22.886 1 29.32 ? C15 DP7 400 H 1 HETATM 16 C C16 DP7 . . . D 4 14.344 -18.279 23.107 1 29.17 ? C16 DP7 400 H 1 HETATM 17 C C17 DP7 . . . D 4 21.952 -15.683 24.623 1 28.36 ? C17 DP7 400 H 1 HETATM 18 C C18 DP7 . . . D 4 22.202 -14.566 25.42 1 28.1 ? C18 DP7 400 H 1 HETATM 19 C C19 DP7 . . . D 4 21.159 -13.976 26.102 1 28.17 ? C19 DP7 400 H 1 HETATM 20 C C20 DP7 . . . D 4 19.853 -14.467 25.98 1 28.21 ? C20 DP7 400 H 1 HETATM 21 C C21 DP7 . . . D 4 19.589 -15.582 25.185 1 28.32 ? C21 DP7 400 H 1 HETATM 22 C C22 DP7 . . . D 4 20.657 -16.208 24.498 1 28.38 ? C22 DP7 400 H 1 HETATM 23 N N1 DP7 . . . D 4 16.206 -11.767 20.38 1 25.45 ? N1 DP7 400 H 1 HETATM 24 N N2 DP7 . . . D 4 11.632 -12.334 23.395 1 23.79 ? N2 DP7 400 H 1 HETATM 25 N N3 DP7 . . . D 4 9.948 -12.974 24.834 1 23.63 ? N3 DP7 400 H 1 HETATM 26 N N4 DP7 . . . D 4 10.554 -10.749 24.957 1 23.35 ? N4 DP7 400 H 1 HETATM 27 N N5 DP7 . . . D 4 18.314 -14.444 21.917 1 27.19 ? N5 DP7 400 H 1 HETATM 28 N N6 DP7 . . . D 4 16.24 -16.849 23.665 1 28.82 ? N6 DP7 400 H 1 HETATM 29 O O1 DP7 . . . D 4 16.312 -11.019 17.508 1 25.52 ? O1 DP7 400 H 1 HETATM 30 O O2 DP7 . . . D 4 14.04 -10.647 17.329 1 25.57 ? O2 DP7 400 H 1 HETATM 31 O O3 DP7 . . . D 4 16.348 -13.961 19.864 1 26.77 ? O3 DP7 400 H 1 HETATM 32 O O4 DP7 . . . D 4 16.482 -14.191 23.209 1 27.18 ? O4 DP7 400 H 1 HETATM 33 O O5 DP7 . . . D 4 16.513 -18.438 22.05 1 29.63 ? O5 DP7 400 H 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 33 #