data_1LHF # _model_server_result.job_id x9TbDqik3eiPk9IgNdBiCA _model_server_result.datetime_utc '2024-12-27 00:37:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1lhf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":400}' # _entry.id 1LHF # _exptl.entry_id 1LHF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 446.348 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description AC-(D)PHE-PRO-BOROHOMOLYS-OH _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.9 _cell.angle_gamma 90 _cell.entry_id 1LHF _cell.length_a 70.3 _cell.length_b 71.9 _cell.length_c 71.9 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LHF _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 9 L CYS 1 1_555 B SG CYS 119 H CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? disulf ? disulf2 B SG CYS 28 H CYS 42 1_555 B SG CYS 44 H CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? disulf ? disulf3 B SG CYS 173 H CYS 168 1_555 B SG CYS 187 H CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? disulf ? disulf4 B SG CYS 201 H CYS 191 1_555 B SG CYS 231 H CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? covale ? covale1 B OG SER 205 H SER 195 1_555 D B1 DI4 . H DI4 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.308 ? # _chem_comp.formula 'C22 H35 B N4 O5' _chem_comp.formula_weight 446.348 _chem_comp.id DI4 _chem_comp.mon_nstd_flag . _chem_comp.name AC-(D)PHE-PRO-BOROHOMOLYS-OH _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag B1 C DI4 sing 83 n n B1 O DI4 sing 84 n n B1 O1 DI4 sing 85 n n C C2 DI4 sing 86 n n C N DI4 sing 87 n n C H DI4 sing 88 n n C2 C3 DI4 sing 89 n n C2 H21 DI4 sing 90 n n C2 H22A DI4 sing 91 n n C3 C4 DI4 sing 92 n n C3 H31 DI4 sing 93 n n C3 H32 DI4 sing 94 n n C4 C5 DI4 sing 95 n n C4 H41 DI4 sing 96 n n C4 H42 DI4 sing 97 n n C5 C6 DI4 sing 98 n n C5 H51 DI4 sing 99 n n C5 H52 DI4 sing 100 n n C6 N1 DI4 sing 101 n n C6 H61 DI4 sing 102 n n C6 H62 DI4 sing 103 n n C7 C8 DI4 sing 104 n n C7 C9 DI4 sing 105 n n C7 N2 DI4 sing 106 n n C7 H7 DI4 sing 107 n n C8 N DI4 sing 108 n n C8 O2 DI4 doub 109 n n C9 C10 DI4 sing 110 n n C9 H91 DI4 sing 111 n n C9 H92 DI4 sing 112 n n C10 C11 DI4 sing 113 n n C10 H101 DI4 sing 114 n n C10 H102 DI4 sing 115 n n C11 N2 DI4 sing 116 n n C11 H111 DI4 sing 117 n n C11 H112 DI4 sing 118 n n C12 C14 DI4 sing 119 n n C12 N2 DI4 sing 120 n n C12 O3 DI4 doub 121 n n C13 C14 DI4 sing 122 n n C13 C21 DI4 sing 123 n n C13 H131 DI4 sing 124 n n C13 H132 DI4 sing 125 n n C14 N3 DI4 sing 126 n n C14 H14 DI4 sing 127 n n C15 C16 DI4 sing 128 n n C15 N3 DI4 sing 129 n n C15 O4 DI4 doub 130 n n C16 H161 DI4 sing 131 n n C16 H162 DI4 sing 132 n n C16 H163 DI4 sing 133 n n C17 C18 DI4 doub 134 n y C17 C22 DI4 sing 135 n y C17 H17 DI4 sing 136 n n C18 C19 DI4 sing 137 n y C18 H18 DI4 sing 138 n n C19 C20 DI4 doub 139 n y C19 H19 DI4 sing 140 n n C20 C21 DI4 sing 141 n y C20 H20 DI4 sing 142 n n C21 C22 DI4 doub 143 n y C22 H22 DI4 sing 144 n n N HN DI4 sing 145 n n N1 HN11 DI4 sing 146 n n N1 HN12 DI4 sing 147 n n N3 HN3 DI4 sing 148 n n O HO DI4 sing 149 n n O1 HO1 DI4 sing 150 n n # _atom_sites.entry_id 1LHF _atom_sites.fract_transf_matrix[1][1] 0.014225 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002739 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013908 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014164 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 DI4 H 1 400 400 DI4 DI4 . E 5 HOH L 1 503 503 HOH HOH . E 5 HOH L 2 541 541 HOH HOH . E 5 HOH L 3 556 556 HOH HOH . E 5 HOH L 4 591 591 HOH HOH . E 5 HOH L 5 593 593 HOH HOH . E 5 HOH L 6 595 595 HOH HOH . E 5 HOH L 7 596 596 HOH HOH . E 5 HOH L 8 602 602 HOH HOH . E 5 HOH L 9 636 636 HOH HOH . E 5 HOH L 10 649 649 HOH HOH . E 5 HOH L 11 650 650 HOH HOH . E 5 HOH L 12 651 651 HOH HOH . F 5 HOH H 1 501 501 HOH HOH . F 5 HOH H 2 502 502 HOH HOH . F 5 HOH H 3 504 504 HOH HOH . F 5 HOH H 4 505 505 HOH HOH . F 5 HOH H 5 507 507 HOH HOH . F 5 HOH H 6 510 510 HOH HOH . F 5 HOH H 7 512 512 HOH HOH . F 5 HOH H 8 513 513 HOH HOH . F 5 HOH H 9 517 517 HOH HOH . F 5 HOH H 10 519 519 HOH HOH . F 5 HOH H 11 521 521 HOH HOH . F 5 HOH H 12 522 522 HOH HOH . F 5 HOH H 13 524 524 HOH HOH . F 5 HOH H 14 527 527 HOH HOH . F 5 HOH H 15 529 529 HOH HOH . F 5 HOH H 16 531 531 HOH HOH . F 5 HOH H 17 537 537 HOH HOH . F 5 HOH H 18 538 538 HOH HOH . F 5 HOH H 19 544 544 HOH HOH . F 5 HOH H 20 548 548 HOH HOH . F 5 HOH H 21 549 549 HOH HOH . F 5 HOH H 22 551 551 HOH HOH . F 5 HOH H 23 552 552 HOH HOH . F 5 HOH H 24 553 553 HOH HOH . F 5 HOH H 25 554 554 HOH HOH . F 5 HOH H 26 555 555 HOH HOH . F 5 HOH H 27 557 557 HOH HOH . F 5 HOH H 28 559 559 HOH HOH . F 5 HOH H 29 561 561 HOH HOH . F 5 HOH H 30 562 562 HOH HOH . F 5 HOH H 31 568 568 HOH HOH . F 5 HOH H 32 569 569 HOH HOH . F 5 HOH H 33 570 570 HOH HOH . F 5 HOH H 34 571 571 HOH HOH . F 5 HOH H 35 572 572 HOH HOH . F 5 HOH H 36 574 574 HOH HOH . F 5 HOH H 37 575 575 HOH HOH . F 5 HOH H 38 576 576 HOH HOH . F 5 HOH H 39 577 577 HOH HOH . F 5 HOH H 40 578 578 HOH HOH . F 5 HOH H 41 579 579 HOH HOH . F 5 HOH H 42 580 580 HOH HOH . F 5 HOH H 43 581 581 HOH HOH . F 5 HOH H 44 582 582 HOH HOH . F 5 HOH H 45 583 583 HOH HOH . F 5 HOH H 46 584 584 HOH HOH . F 5 HOH H 47 586 586 HOH HOH . F 5 HOH H 48 587 587 HOH HOH . F 5 HOH H 49 588 588 HOH HOH . F 5 HOH H 50 589 589 HOH HOH . F 5 HOH H 51 590 590 HOH HOH . F 5 HOH H 52 594 594 HOH HOH . F 5 HOH H 53 599 599 HOH HOH . F 5 HOH H 54 600 600 HOH HOH . F 5 HOH H 55 601 601 HOH HOH . F 5 HOH H 56 603 603 HOH HOH . F 5 HOH H 57 605 605 HOH HOH . F 5 HOH H 58 609 609 HOH HOH . F 5 HOH H 59 611 611 HOH HOH . F 5 HOH H 60 614 614 HOH HOH . F 5 HOH H 61 615 615 HOH HOH . F 5 HOH H 62 616 616 HOH HOH . F 5 HOH H 63 617 617 HOH HOH . F 5 HOH H 64 620 620 HOH HOH . F 5 HOH H 65 621 621 HOH HOH . F 5 HOH H 66 623 623 HOH HOH . F 5 HOH H 67 624 624 HOH HOH . F 5 HOH H 68 625 625 HOH HOH . F 5 HOH H 69 626 626 HOH HOH . F 5 HOH H 70 628 628 HOH HOH . F 5 HOH H 71 630 630 HOH HOH . F 5 HOH H 72 631 631 HOH HOH . F 5 HOH H 73 632 632 HOH HOH . F 5 HOH H 74 635 635 HOH HOH . F 5 HOH H 75 638 638 HOH HOH . F 5 HOH H 76 640 640 HOH HOH . F 5 HOH H 77 641 641 HOH HOH . F 5 HOH H 78 643 643 HOH HOH . F 5 HOH H 79 644 644 HOH HOH . F 5 HOH H 80 647 647 HOH HOH . F 5 HOH H 81 648 648 HOH HOH . F 5 HOH H 82 652 652 HOH HOH . F 5 HOH H 83 653 653 HOH HOH . F 5 HOH H 84 654 654 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 B B1 DI4 . . . D 4 14.655 -10.045 18.755 1 19.3 ? B1 DI4 400 H 1 HETATM 2 C C DI4 . . . D 4 14.444 -11.037 19.924 1 19.26 ? C DI4 400 H 1 HETATM 3 C C2 DI4 . . . D 4 13.303 -10.497 20.82 1 18.94 ? C2 DI4 400 H 1 HETATM 4 C C3 DI4 . . . D 4 12.235 -11.505 21.23 1 18.75 ? C3 DI4 400 H 1 HETATM 5 C C4 DI4 . . . D 4 12.341 -12.008 22.652 1 18.65 ? C4 DI4 400 H 1 HETATM 6 C C5 DI4 . . . D 4 11.136 -11.651 23.408 1 18.83 ? C5 DI4 400 H 1 HETATM 7 C C6 DI4 . . . D 4 10.641 -12.357 24.54 1 19.02 ? C6 DI4 400 H 1 HETATM 8 C C7 DI4 . . . D 4 17.624 -12.806 21.361 1 19.73 ? C7 DI4 400 H 1 HETATM 9 C C8 DI4 . . . D 4 16.362 -12.512 20.497 1 19.56 ? C8 DI4 400 H 1 HETATM 10 C C9 DI4 . . . D 4 18.907 -12.745 20.495 1 19.81 ? C9 DI4 400 H 1 HETATM 11 C C10 DI4 . . . D 4 19.397 -14.169 20.258 1 19.58 ? C10 DI4 400 H 1 HETATM 12 C C11 DI4 . . . D 4 18.633 -15.063 21.211 1 19.84 ? C11 DI4 400 H 1 HETATM 13 C C12 DI4 . . . D 4 16.901 -14.589 22.967 1 20.14 ? C12 DI4 400 H 1 HETATM 14 C C13 DI4 . . . D 4 17.412 -15.978 25.138 1 21.05 ? C13 DI4 400 H 1 HETATM 15 C C14 DI4 . . . D 4 17 -16.011 23.616 1 20.75 ? C14 DI4 400 H 1 HETATM 16 C C15 DI4 . . . D 4 15.633 -17.949 22.933 1 21.67 ? C15 DI4 400 H 1 HETATM 17 C C16 DI4 . . . D 4 14.266 -18.608 22.893 1 21.44 ? C16 DI4 400 H 1 HETATM 18 C C17 DI4 . . . D 4 21.215 -15.301 24.964 1 21.17 ? C17 DI4 400 H 1 HETATM 19 C C18 DI4 . . . D 4 21.354 -14.265 25.873 1 21.13 ? C18 DI4 400 H 1 HETATM 20 C C19 DI4 . . . D 4 20.237 -13.775 26.552 1 21.19 ? C19 DI4 400 H 1 HETATM 21 C C20 DI4 . . . D 4 18.977 -14.325 26.308 1 21.21 ? C20 DI4 400 H 1 HETATM 22 C C21 DI4 . . . D 4 18.825 -15.376 25.406 1 21.14 ? C21 DI4 400 H 1 HETATM 23 C C22 DI4 . . . D 4 19.955 -15.853 24.718 1 21.25 ? C22 DI4 400 H 1 HETATM 24 N N DI4 . . . D 4 15.66 -11.375 20.734 1 19.21 ? N DI4 400 H 1 HETATM 25 N N1 DI4 . . . D 4 10.299 -11.67 25.73 1 19.52 ? N1 DI4 400 H 1 HETATM 26 N N2 DI4 . . . D 4 17.688 -14.187 21.936 1 19.93 ? N2 DI4 400 H 1 HETATM 27 N N3 DI4 . . . D 4 15.699 -16.691 23.419 1 21.26 ? N3 DI4 400 H 1 HETATM 28 O O DI4 . . . D 4 13.434 -10.008 17.959 1 19.67 ? O DI4 400 H 1 HETATM 29 O O1 DI4 . . . D 4 15.724 -10.326 17.83 1 19.16 ? O1 DI4 400 H 1 HETATM 30 O O2 DI4 . . . D 4 16.048 -13.328 19.611 1 19.75 ? O2 DI4 400 H 1 HETATM 31 O O3 DI4 . . . D 4 16.084 -13.815 23.464 1 19.87 ? O3 DI4 400 H 1 HETATM 32 O O4 DI4 . . . D 4 16.651 -18.546 22.528 1 21.99 ? O4 DI4 400 H 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 32 #