data_1LHR # _model_server_result.job_id cVdf4e-0OskgGN5tYKvv6A _model_server_result.datetime_utc '2024-10-19 03:49:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1lhr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":405}' # _entry.id 1LHR # _exptl.entry_id 1LHR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 39.098 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1LHR _cell.length_a 59 _cell.length_b 93.8 _cell.length_c 128.8 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LHR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 113 A ASP 113 1_555 D K K . A K 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.005 ? metalc ? metalc2 A O THR 148 A THR 148 1_555 D K K . A K 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? metalc ? metalc3 A OE1 GLU 153 A GLU 153 1_555 D K K . A K 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.518 ? metalc ? metalc4 A OG1 THR 186 A THR 186 1_555 D K K . A K 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.169 ? metalc ? metalc5 E O2G ATP . A ATP 401 1_555 C ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? metalc ? metalc6 E O1B ATP . A ATP 401 1_555 C ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc7 E O1B ATP . A ATP 401 1_555 D K K . A K 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc8 C ZN ZN . A ZN 403 1_555 D K K . A K 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.365 ? metalc ? metalc9 D K K . A K 405 1_555 I O HOH . A HOH 423 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.422 ? metalc ? metalc10 B OD1 ASP 113 B ASP 113 1_555 G K K . B K 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.16 ? metalc ? metalc11 B O THR 148 B THR 148 1_555 G K K . B K 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.503 ? metalc ? metalc12 B OG1 THR 186 B THR 186 1_555 G K K . B K 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.114 ? metalc ? metalc13 H O1B ATP . B ATP 402 1_555 F ZN ZN . B ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc14 H O2G ATP . B ATP 402 1_555 F ZN ZN . B ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.526 ? metalc ? metalc15 H O1B ATP . B ATP 402 1_555 G K K . B K 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.638 ? metalc ? metalc16 F ZN ZN . B ZN 404 1_555 G K K . B K 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.449 ? metalc ? metalc17 G K K . B K 406 1_555 J O HOH . B HOH 418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.762 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1LHR _atom_sites.fract_transf_matrix[1][1] 0.016949 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010661 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007764 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 403 403 ZN ZN . D 3 K A 1 405 405 K K . E 4 ATP A 1 401 401 ATP ATP . F 2 ZN B 1 404 404 ZN ZN . G 3 K B 1 406 406 K K . H 4 ATP B 1 402 402 ATP ATP . I 5 HOH A 1 406 1 HOH HOH . I 5 HOH A 2 407 3 HOH HOH . I 5 HOH A 3 408 6 HOH HOH . I 5 HOH A 4 409 9 HOH HOH . I 5 HOH A 5 410 10 HOH HOH . I 5 HOH A 6 411 12 HOH HOH . I 5 HOH A 7 412 15 HOH HOH . I 5 HOH A 8 413 16 HOH HOH . I 5 HOH A 9 414 17 HOH HOH . I 5 HOH A 10 415 18 HOH HOH . I 5 HOH A 11 416 22 HOH HOH . I 5 HOH A 12 417 26 HOH HOH . I 5 HOH A 13 418 29 HOH HOH . I 5 HOH A 14 419 30 HOH HOH . I 5 HOH A 15 420 31 HOH HOH . I 5 HOH A 16 421 32 HOH HOH . I 5 HOH A 17 422 33 HOH HOH . I 5 HOH A 18 423 34 HOH HOH . I 5 HOH A 19 424 35 HOH HOH . I 5 HOH A 20 425 37 HOH HOH . I 5 HOH A 21 426 39 HOH HOH . I 5 HOH A 22 427 40 HOH HOH . I 5 HOH A 23 428 41 HOH HOH . I 5 HOH A 24 429 43 HOH HOH . I 5 HOH A 25 430 44 HOH HOH . I 5 HOH A 26 431 45 HOH HOH . I 5 HOH A 27 432 47 HOH HOH . I 5 HOH A 28 433 51 HOH HOH . I 5 HOH A 29 434 53 HOH HOH . I 5 HOH A 30 435 54 HOH HOH . I 5 HOH A 31 436 56 HOH HOH . I 5 HOH A 32 437 58 HOH HOH . I 5 HOH A 33 438 59 HOH HOH . I 5 HOH A 34 439 60 HOH HOH . I 5 HOH A 35 440 62 HOH HOH . I 5 HOH A 36 441 64 HOH HOH . I 5 HOH A 37 442 66 HOH HOH . I 5 HOH A 38 443 69 HOH HOH . I 5 HOH A 39 444 70 HOH HOH . I 5 HOH A 40 445 71 HOH HOH . I 5 HOH A 41 446 73 HOH HOH . I 5 HOH A 42 447 76 HOH HOH . I 5 HOH A 43 448 78 HOH HOH . I 5 HOH A 44 449 79 HOH HOH . I 5 HOH A 45 450 83 HOH HOH . I 5 HOH A 46 451 84 HOH HOH . I 5 HOH A 47 452 85 HOH HOH . I 5 HOH A 48 453 86 HOH HOH . I 5 HOH A 49 454 87 HOH HOH . I 5 HOH A 50 455 89 HOH HOH . I 5 HOH A 51 456 91 HOH HOH . I 5 HOH A 52 457 92 HOH HOH . I 5 HOH A 53 458 93 HOH HOH . I 5 HOH A 54 459 97 HOH HOH . I 5 HOH A 55 460 98 HOH HOH . I 5 HOH A 56 461 105 HOH HOH . I 5 HOH A 57 462 107 HOH HOH . J 5 HOH B 1 407 2 HOH HOH . J 5 HOH B 2 408 4 HOH HOH . J 5 HOH B 3 409 5 HOH HOH . J 5 HOH B 4 410 7 HOH HOH . J 5 HOH B 5 411 8 HOH HOH . J 5 HOH B 6 412 11 HOH HOH . J 5 HOH B 7 413 13 HOH HOH . J 5 HOH B 8 414 14 HOH HOH . J 5 HOH B 9 415 19 HOH HOH . J 5 HOH B 10 416 20 HOH HOH . J 5 HOH B 11 417 21 HOH HOH . J 5 HOH B 12 418 23 HOH HOH . J 5 HOH B 13 419 24 HOH HOH . J 5 HOH B 14 420 25 HOH HOH . J 5 HOH B 15 421 27 HOH HOH . J 5 HOH B 16 422 28 HOH HOH . J 5 HOH B 17 423 36 HOH HOH . J 5 HOH B 18 424 38 HOH HOH . J 5 HOH B 19 425 42 HOH HOH . J 5 HOH B 20 426 46 HOH HOH . J 5 HOH B 21 427 48 HOH HOH . J 5 HOH B 22 428 49 HOH HOH . J 5 HOH B 23 429 50 HOH HOH . J 5 HOH B 24 430 52 HOH HOH . J 5 HOH B 25 431 55 HOH HOH . J 5 HOH B 26 432 57 HOH HOH . J 5 HOH B 27 433 61 HOH HOH . J 5 HOH B 28 434 63 HOH HOH . J 5 HOH B 29 435 65 HOH HOH . J 5 HOH B 30 436 67 HOH HOH . J 5 HOH B 31 437 68 HOH HOH . J 5 HOH B 32 438 72 HOH HOH . J 5 HOH B 33 439 74 HOH HOH . J 5 HOH B 34 440 75 HOH HOH . J 5 HOH B 35 441 77 HOH HOH . J 5 HOH B 36 442 80 HOH HOH . J 5 HOH B 37 443 81 HOH HOH . J 5 HOH B 38 444 82 HOH HOH . J 5 HOH B 39 445 88 HOH HOH . J 5 HOH B 40 446 90 HOH HOH . J 5 HOH B 41 447 94 HOH HOH . J 5 HOH B 42 448 95 HOH HOH . J 5 HOH B 43 449 96 HOH HOH . J 5 HOH B 44 450 99 HOH HOH . J 5 HOH B 45 451 100 HOH HOH . J 5 HOH B 46 452 101 HOH HOH . J 5 HOH B 47 453 102 HOH HOH . J 5 HOH B 48 454 103 HOH HOH . J 5 HOH B 49 455 104 HOH HOH . J 5 HOH B 50 456 106 HOH HOH . J 5 HOH B 51 457 108 HOH HOH . J 5 HOH B 52 458 109 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 30.553 _atom_site.Cartn_y -4.403 _atom_site.Cartn_z 60.91 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 37.05 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 405 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 336 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #