data_1LHS # _model_server_result.job_id asN3YWG9Fepo_jTilPJ_Gg _model_server_result.datetime_utc '2024-11-05 00:39:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1lhs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":155}' # _entry.id 1LHS # _exptl.entry_id 1LHS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 616.487 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PROTOPORPHYRIN IX CONTAINING FE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1LHS _cell.length_a 37.5 _cell.length_b 61.1 _cell.length_c 75.2 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LHS _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 93 A HIS 93 1_555 B FE HEM . A HEM 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc2 B FE HEM . A HEM 155 1_555 C O HOH . A HOH 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? # _chem_comp.formula 'C34 H32 Fe N4 O4' _chem_comp.formula_weight 616.487 _chem_comp.id HEM _chem_comp.mon_nstd_flag . _chem_comp.name 'PROTOPORPHYRIN IX CONTAINING FE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEME # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CHA C1A HEM sing 129 n n CHA C4D HEM doub 130 n n CHA HHA HEM sing 131 n n CHB C4A HEM sing 132 n n CHB C1B HEM doub 133 n n CHB HHB HEM sing 134 n n CHC C4B HEM sing 135 n n CHC C1C HEM doub 136 n n CHC HHC HEM sing 137 n n CHD C4C HEM doub 138 n n CHD C1D HEM sing 139 n n CHD HHD HEM sing 140 n n C1A C2A HEM doub 141 n y C1A NA HEM sing 142 n y C2A C3A HEM sing 143 n y C2A CAA HEM sing 144 n n C3A C4A HEM doub 145 n y C3A CMA HEM sing 146 n n C4A NA HEM sing 147 n y CMA HMA HEM sing 148 n n CMA HMAA HEM sing 149 n n CMA HMAB HEM sing 150 n n CAA CBA HEM sing 151 n n CAA HAA HEM sing 152 n n CAA HAAA HEM sing 153 n n CBA CGA HEM sing 154 n n CBA HBA HEM sing 155 n n CBA HBAA HEM sing 156 n n CGA O1A HEM doub 157 n n CGA O2A HEM sing 158 n n C1B C2B HEM sing 159 n n C1B NB HEM sing 160 n n C2B C3B HEM doub 161 n n C2B CMB HEM sing 162 n n C3B C4B HEM sing 163 n n C3B CAB HEM sing 164 n n C4B NB HEM doub 165 n n CMB HMB HEM sing 166 n n CMB HMBA HEM sing 167 n n CMB HMBB HEM sing 168 n n CAB CBB HEM doub 169 n n CAB HAB HEM sing 170 n n CBB HBB HEM sing 171 n n CBB HBBA HEM sing 172 n n C1C C2C HEM sing 173 n y C1C NC HEM sing 174 n y C2C C3C HEM doub 175 n y C2C CMC HEM sing 176 n n C3C C4C HEM sing 177 n y C3C CAC HEM sing 178 n n C4C NC HEM sing 179 n y CMC HMC HEM sing 180 n n CMC HMCA HEM sing 181 n n CMC HMCB HEM sing 182 n n CAC CBC HEM doub 183 n n CAC HAC HEM sing 184 n n CBC HBC HEM sing 185 n n CBC HBCA HEM sing 186 n n C1D C2D HEM sing 187 n n C1D ND HEM doub 188 n n C2D C3D HEM doub 189 n n C2D CMD HEM sing 190 n n C3D C4D HEM sing 191 n n C3D CAD HEM sing 192 n n C4D ND HEM sing 193 n n CMD HMD HEM sing 194 n n CMD HMDA HEM sing 195 n n CMD HMDB HEM sing 196 n n CAD CBD HEM sing 197 n n CAD HAD HEM sing 198 n n CAD HADA HEM sing 199 n n CBD CGD HEM sing 200 n n CBD HBD HEM sing 201 n n CBD HBDA HEM sing 202 n n CGD O1D HEM doub 203 n n CGD O2D HEM sing 204 n n O2A H2A HEM sing 205 n n O2D H2D HEM sing 206 n n FE NA HEM sing 207 n n FE NB HEM sing 208 n n FE NC HEM sing 209 n n FE ND HEM sing 210 n n # _atom_sites.entry_id 1LHS _atom_sites.fract_transf_matrix[1][1] 0.026667 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016367 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013298 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 155 155 HEM HEM . C 3 HOH A 1 201 201 HOH HOH . C 3 HOH A 2 202 202 HOH HOH . C 3 HOH A 3 203 203 HOH HOH . C 3 HOH A 4 204 204 HOH HOH . C 3 HOH A 5 205 205 HOH HOH . C 3 HOH A 6 206 206 HOH HOH . C 3 HOH A 7 209 209 HOH HOH . C 3 HOH A 8 213 213 HOH HOH . C 3 HOH A 9 214 214 HOH HOH . C 3 HOH A 10 216 216 HOH HOH . C 3 HOH A 11 218 218 HOH HOH . C 3 HOH A 12 221 221 HOH HOH . C 3 HOH A 13 224 224 HOH HOH . C 3 HOH A 14 225 225 HOH HOH . C 3 HOH A 15 226 226 HOH HOH . C 3 HOH A 16 227 227 HOH HOH . C 3 HOH A 17 228 228 HOH HOH . C 3 HOH A 18 229 229 HOH HOH . C 3 HOH A 19 230 230 HOH HOH . C 3 HOH A 20 231 231 HOH HOH . C 3 HOH A 21 232 232 HOH HOH . C 3 HOH A 22 234 234 HOH HOH . C 3 HOH A 23 237 237 HOH HOH . C 3 HOH A 24 238 238 HOH HOH . C 3 HOH A 25 240 240 HOH HOH . C 3 HOH A 26 245 245 HOH HOH . C 3 HOH A 27 249 249 HOH HOH . C 3 HOH A 28 250 250 HOH HOH . C 3 HOH A 29 251 251 HOH HOH . C 3 HOH A 30 259 259 HOH HOH . C 3 HOH A 31 261 261 HOH HOH . C 3 HOH A 32 263 263 HOH HOH . C 3 HOH A 33 267 267 HOH HOH . C 3 HOH A 34 269 269 HOH HOH . C 3 HOH A 35 271 271 HOH HOH . C 3 HOH A 36 282 282 HOH HOH . C 3 HOH A 37 283 283 HOH HOH . C 3 HOH A 38 285 285 HOH HOH . C 3 HOH A 39 287 287 HOH HOH . C 3 HOH A 40 289 289 HOH HOH . C 3 HOH A 41 291 291 HOH HOH . C 3 HOH A 42 297 297 HOH HOH . C 3 HOH A 43 299 299 HOH HOH . C 3 HOH A 44 301 301 HOH HOH . C 3 HOH A 45 302 302 HOH HOH . C 3 HOH A 46 307 307 HOH HOH . C 3 HOH A 47 312 312 HOH HOH . C 3 HOH A 48 315 315 HOH HOH . C 3 HOH A 49 316 316 HOH HOH . C 3 HOH A 50 318 318 HOH HOH . C 3 HOH A 51 323 323 HOH HOH . C 3 HOH A 52 325 325 HOH HOH . C 3 HOH A 53 326 326 HOH HOH . C 3 HOH A 54 328 328 HOH HOH . C 3 HOH A 55 329 329 HOH HOH . C 3 HOH A 56 330 330 HOH HOH . C 3 HOH A 57 331 331 HOH HOH . C 3 HOH A 58 332 332 HOH HOH . C 3 HOH A 59 333 333 HOH HOH . C 3 HOH A 60 334 334 HOH HOH . C 3 HOH A 61 335 335 HOH HOH . C 3 HOH A 62 336 336 HOH HOH . C 3 HOH A 63 337 337 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA HEM . . . B 2 12.337 0.27 22.442 1 16.4 ? CHA HEM 155 A 1 HETATM 2 C CHB HEM . . . B 2 14.593 1.352 18.395 1 9.03 ? CHB HEM 155 A 1 HETATM 3 C CHC HEM . . . B 2 11.554 -1.362 15.814 1 10.52 ? CHC HEM 155 A 1 HETATM 4 C CHD HEM . . . B 2 9.395 -2.576 19.951 1 11.32 ? CHD HEM 155 A 1 HETATM 5 C C1A HEM . . . B 2 13.108 0.898 21.482 1 24.07 ? C1A HEM 155 A 1 HETATM 6 C C2A HEM . . . B 2 14.335 1.553 21.819 1 6.19 ? C2A HEM 155 A 1 HETATM 7 C C3A HEM . . . B 2 14.916 2.031 20.703 1 7.35 ? C3A HEM 155 A 1 HETATM 8 C C4A HEM . . . B 2 14.079 1.476 19.653 1 17.24 ? C4A HEM 155 A 1 HETATM 9 C CMA HEM . . . B 2 16.085 3.051 20.435 1 5.85 ? CMA HEM 155 A 1 HETATM 10 C CAA HEM . . . B 2 14.702 1.717 23.3 1 17.84 ? CAA HEM 155 A 1 HETATM 11 C CBA HEM . . . B 2 16.118 1.223 23.626 1 24.18 ? CBA HEM 155 A 1 HETATM 12 C CGA HEM . . . B 2 16.209 -0.277 23.597 1 18.18 ? CGA HEM 155 A 1 HETATM 13 O O1A HEM . . . B 2 15.427 -0.93 24.344 1 24.81 ? O1A HEM 155 A 1 HETATM 14 O O2A HEM . . . B 2 17.074 -0.758 22.849 1 36.93 ? O2A HEM 155 A 1 HETATM 15 C C1B HEM . . . B 2 13.911 0.829 17.314 1 20.51 ? C1B HEM 155 A 1 HETATM 16 C C2B HEM . . . B 2 14.327 0.819 15.891 1 10.88 ? C2B HEM 155 A 1 HETATM 17 C C3B HEM . . . B 2 13.449 0.06 15.215 1 9.85 ? C3B HEM 155 A 1 HETATM 18 C C4B HEM . . . B 2 12.676 -0.643 16.208 1 16.97 ? C4B HEM 155 A 1 HETATM 19 C CMB HEM . . . B 2 15.404 1.715 15.194 1 15.99 ? CMB HEM 155 A 1 HETATM 20 C CAB HEM . . . B 2 13.186 0.165 13.686 1 12.34 ? CAB HEM 155 A 1 HETATM 21 C CBB HEM . . . B 2 13.855 -0.546 12.897 1 67.42 ? CBB HEM 155 A 1 HETATM 22 C C1C HEM . . . B 2 10.729 -2.068 16.682 1 17.32 ? C1C HEM 155 A 1 HETATM 23 C C2C HEM . . . B 2 9.484 -2.709 16.313 1 14.79 ? C2C HEM 155 A 1 HETATM 24 C C3C HEM . . . B 2 8.932 -3.104 17.482 1 10.38 ? C3C HEM 155 A 1 HETATM 25 C C4C HEM . . . B 2 9.687 -2.549 18.599 1 22.38 ? C4C HEM 155 A 1 HETATM 26 C CMC HEM . . . B 2 8.934 -3.017 14.91 1 4.88 ? CMC HEM 155 A 1 HETATM 27 C CAC HEM . . . B 2 7.724 -4.022 17.592 1 8.84 ? CAC HEM 155 A 1 HETATM 28 C CBC HEM . . . B 2 6.596 -3.518 18.033 1 55.79 ? CBC HEM 155 A 1 HETATM 29 C C1D HEM . . . B 2 10.128 -2.034 20.996 1 13.91 ? C1D HEM 155 A 1 HETATM 30 C C2D HEM . . . B 2 9.773 -2.226 22.415 1 12.96 ? C2D HEM 155 A 1 HETATM 31 C C3D HEM . . . B 2 10.565 -1.434 23.114 1 14.31 ? C3D HEM 155 A 1 HETATM 32 C C4D HEM . . . B 2 11.556 -0.844 22.192 1 14.7 ? C4D HEM 155 A 1 HETATM 33 C CMD HEM . . . B 2 8.716 -3.22 22.972 1 16.29 ? CMD HEM 155 A 1 HETATM 34 C CAD HEM . . . B 2 10.389 -1.191 24.622 1 18.88 ? CAD HEM 155 A 1 HETATM 35 C CBD HEM . . . B 2 9.79 0.183 24.946 1 16.66 ? CBD HEM 155 A 1 HETATM 36 C CGD HEM . . . B 2 9.669 0.353 26.43 1 17.45 ? CGD HEM 155 A 1 HETATM 37 O O1D HEM . . . B 2 8.578 0.72 26.829 1 22.04 ? O1D HEM 155 A 1 HETATM 38 O O2D HEM . . . B 2 10.535 -0.131 27.185 1 54.73 ? O2D HEM 155 A 1 HETATM 39 N NA HEM . . . B 2 13.274 0.491 20.195 1 14.76 ? NA HEM 155 A 1 HETATM 40 N NB HEM . . . B 2 12.926 -0.079 17.492 1 6.47 ? NB HEM 155 A 1 HETATM 41 N NC HEM . . . B 2 10.767 -1.909 18.093 1 5.7 ? NC HEM 155 A 1 HETATM 42 N ND HEM . . . B 2 11.268 -1.243 20.91 1 17.34 ? ND HEM 155 A 1 HETATM 43 FE FE HEM . . . B 2 12.027 -0.681 19.22 1 15.53 ? FE HEM 155 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 43 #