data_1LHT # _model_server_result.job_id hmIdb2nvW4jIQMFZ_u13JA _model_server_result.datetime_utc '2024-11-22 11:09:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1lht # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":155}' # _entry.id 1LHT # _exptl.entry_id 1LHT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 616.487 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PROTOPORPHYRIN IX CONTAINING FE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1LHT _cell.length_a 37.57 _cell.length_b 61.27 _cell.length_c 75.29 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LHT _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 93 A HIS 93 1_555 C FE HEM . A HEM 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc2 C FE HEM . A HEM 155 1_555 B C CYN . A CYN 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc3 C FE HEM . A HEM 155 1_555 B N CYN . A CYN 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.825 ? # _chem_comp.formula 'C34 H32 Fe N4 O4' _chem_comp.formula_weight 616.487 _chem_comp.id HEM _chem_comp.mon_nstd_flag . _chem_comp.name 'PROTOPORPHYRIN IX CONTAINING FE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEME # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CHA C1A HEM sing 130 n n CHA C4D HEM doub 131 n n CHA HHA HEM sing 132 n n CHB C4A HEM sing 133 n n CHB C1B HEM doub 134 n n CHB HHB HEM sing 135 n n CHC C4B HEM sing 136 n n CHC C1C HEM doub 137 n n CHC HHC HEM sing 138 n n CHD C4C HEM doub 139 n n CHD C1D HEM sing 140 n n CHD HHD HEM sing 141 n n C1A C2A HEM doub 142 n y C1A NA HEM sing 143 n y C2A C3A HEM sing 144 n y C2A CAA HEM sing 145 n n C3A C4A HEM doub 146 n y C3A CMA HEM sing 147 n n C4A NA HEM sing 148 n y CMA HMA HEM sing 149 n n CMA HMAA HEM sing 150 n n CMA HMAB HEM sing 151 n n CAA CBA HEM sing 152 n n CAA HAA HEM sing 153 n n CAA HAAA HEM sing 154 n n CBA CGA HEM sing 155 n n CBA HBA HEM sing 156 n n CBA HBAA HEM sing 157 n n CGA O1A HEM doub 158 n n CGA O2A HEM sing 159 n n C1B C2B HEM sing 160 n n C1B NB HEM sing 161 n n C2B C3B HEM doub 162 n n C2B CMB HEM sing 163 n n C3B C4B HEM sing 164 n n C3B CAB HEM sing 165 n n C4B NB HEM doub 166 n n CMB HMB HEM sing 167 n n CMB HMBA HEM sing 168 n n CMB HMBB HEM sing 169 n n CAB CBB HEM doub 170 n n CAB HAB HEM sing 171 n n CBB HBB HEM sing 172 n n CBB HBBA HEM sing 173 n n C1C C2C HEM sing 174 n y C1C NC HEM sing 175 n y C2C C3C HEM doub 176 n y C2C CMC HEM sing 177 n n C3C C4C HEM sing 178 n y C3C CAC HEM sing 179 n n C4C NC HEM sing 180 n y CMC HMC HEM sing 181 n n CMC HMCA HEM sing 182 n n CMC HMCB HEM sing 183 n n CAC CBC HEM doub 184 n n CAC HAC HEM sing 185 n n CBC HBC HEM sing 186 n n CBC HBCA HEM sing 187 n n C1D C2D HEM sing 188 n n C1D ND HEM doub 189 n n C2D C3D HEM doub 190 n n C2D CMD HEM sing 191 n n C3D C4D HEM sing 192 n n C3D CAD HEM sing 193 n n C4D ND HEM sing 194 n n CMD HMD HEM sing 195 n n CMD HMDA HEM sing 196 n n CMD HMDB HEM sing 197 n n CAD CBD HEM sing 198 n n CAD HAD HEM sing 199 n n CAD HADA HEM sing 200 n n CBD CGD HEM sing 201 n n CBD HBD HEM sing 202 n n CBD HBDA HEM sing 203 n n CGD O1D HEM doub 204 n n CGD O2D HEM sing 205 n n O2A H2A HEM sing 206 n n O2D H2D HEM sing 207 n n FE NA HEM sing 208 n n FE NB HEM sing 209 n n FE NC HEM sing 210 n n FE ND HEM sing 211 n n # _atom_sites.entry_id 1LHT _atom_sites.fract_transf_matrix[1][1] 0.026617 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016321 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013282 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CYN A 1 158 158 CYN CYN . C 3 HEM A 1 155 155 HEM HEM . D 4 HOH A 1 201 201 HOH HOH . D 4 HOH A 2 202 202 HOH HOH . D 4 HOH A 3 203 203 HOH HOH . D 4 HOH A 4 204 204 HOH HOH . D 4 HOH A 5 205 205 HOH HOH . D 4 HOH A 6 206 206 HOH HOH . D 4 HOH A 7 207 207 HOH HOH . D 4 HOH A 8 208 208 HOH HOH . D 4 HOH A 9 209 209 HOH HOH . D 4 HOH A 10 210 210 HOH HOH . D 4 HOH A 11 211 211 HOH HOH . D 4 HOH A 12 212 212 HOH HOH . D 4 HOH A 13 213 213 HOH HOH . D 4 HOH A 14 214 214 HOH HOH . D 4 HOH A 15 215 215 HOH HOH . D 4 HOH A 16 216 216 HOH HOH . D 4 HOH A 17 217 217 HOH HOH . D 4 HOH A 18 218 218 HOH HOH . D 4 HOH A 19 219 219 HOH HOH . D 4 HOH A 20 220 220 HOH HOH . D 4 HOH A 21 221 221 HOH HOH . D 4 HOH A 22 222 222 HOH HOH . D 4 HOH A 23 223 223 HOH HOH . D 4 HOH A 24 224 224 HOH HOH . D 4 HOH A 25 225 225 HOH HOH . D 4 HOH A 26 226 226 HOH HOH . D 4 HOH A 27 227 227 HOH HOH . D 4 HOH A 28 228 228 HOH HOH . D 4 HOH A 29 229 229 HOH HOH . D 4 HOH A 30 230 230 HOH HOH . D 4 HOH A 31 231 231 HOH HOH . D 4 HOH A 32 232 232 HOH HOH . D 4 HOH A 33 233 233 HOH HOH . D 4 HOH A 34 234 234 HOH HOH . D 4 HOH A 35 235 235 HOH HOH . D 4 HOH A 36 236 236 HOH HOH . D 4 HOH A 37 237 237 HOH HOH . D 4 HOH A 38 238 238 HOH HOH . D 4 HOH A 39 239 239 HOH HOH . D 4 HOH A 40 240 240 HOH HOH . D 4 HOH A 41 241 241 HOH HOH . D 4 HOH A 42 242 242 HOH HOH . D 4 HOH A 43 243 243 HOH HOH . D 4 HOH A 44 244 244 HOH HOH . D 4 HOH A 45 245 245 HOH HOH . D 4 HOH A 46 246 246 HOH HOH . D 4 HOH A 47 247 247 HOH HOH . D 4 HOH A 48 248 248 HOH HOH . D 4 HOH A 49 249 249 HOH HOH . D 4 HOH A 50 250 250 HOH HOH . D 4 HOH A 51 251 251 HOH HOH . D 4 HOH A 52 252 252 HOH HOH . D 4 HOH A 53 253 253 HOH HOH . D 4 HOH A 54 254 254 HOH HOH . D 4 HOH A 55 255 255 HOH HOH . D 4 HOH A 56 256 256 HOH HOH . D 4 HOH A 57 257 257 HOH HOH . D 4 HOH A 58 258 258 HOH HOH . D 4 HOH A 59 259 259 HOH HOH . D 4 HOH A 60 260 260 HOH HOH . D 4 HOH A 61 261 261 HOH HOH . D 4 HOH A 62 262 262 HOH HOH . D 4 HOH A 63 263 263 HOH HOH . D 4 HOH A 64 264 264 HOH HOH . D 4 HOH A 65 265 265 HOH HOH . D 4 HOH A 66 266 266 HOH HOH . D 4 HOH A 67 267 267 HOH HOH . D 4 HOH A 68 268 268 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA HEM . . . C 3 12.333 0.263 22.286 1 23.14 ? CHA HEM 155 A 1 HETATM 2 C CHB HEM . . . C 3 14.454 1.382 18.305 1 15.13 ? CHB HEM 155 A 1 HETATM 3 C CHC HEM . . . C 3 11.558 -1.454 15.813 1 16 ? CHC HEM 155 A 1 HETATM 4 C CHD HEM . . . C 3 9.322 -2.589 19.947 1 24.77 ? CHD HEM 155 A 1 HETATM 5 C C1A HEM . . . C 3 13.265 0.709 21.401 1 17.03 ? C1A HEM 155 A 1 HETATM 6 C C2A HEM . . . C 3 14.246 1.691 21.781 1 14.6 ? C2A HEM 155 A 1 HETATM 7 C C3A HEM . . . C 3 14.813 2.134 20.674 1 12.38 ? C3A HEM 155 A 1 HETATM 8 C C4A HEM . . . C 3 14.13 1.344 19.638 1 15.1 ? C4A HEM 155 A 1 HETATM 9 C CMA HEM . . . C 3 16.046 2.995 20.394 1 8.65 ? CMA HEM 155 A 1 HETATM 10 C CAA HEM . . . C 3 14.53 1.91 23.314 1 20.7 ? CAA HEM 155 A 1 HETATM 11 C CBA HEM . . . C 3 15.891 1.437 23.834 1 17.65 ? CBA HEM 155 A 1 HETATM 12 C CGA HEM . . . C 3 15.9 -0.063 23.672 1 30.84 ? CGA HEM 155 A 1 HETATM 13 O O1A HEM . . . C 3 15.062 -0.695 24.348 1 26.08 ? O1A HEM 155 A 1 HETATM 14 O O2A HEM . . . C 3 16.701 -0.593 22.907 1 28.99 ? O2A HEM 155 A 1 HETATM 15 C C1B HEM . . . C 3 13.78 0.717 17.29 1 16.09 ? C1B HEM 155 A 1 HETATM 16 C C2B HEM . . . C 3 14.242 0.767 15.891 1 14.11 ? C2B HEM 155 A 1 HETATM 17 C C3B HEM . . . C 3 13.459 -0.062 15.193 1 10.87 ? C3B HEM 155 A 1 HETATM 18 C C4B HEM . . . C 3 12.628 -0.694 16.186 1 14.65 ? C4B HEM 155 A 1 HETATM 19 C CMB HEM . . . C 3 15.444 1.729 15.289 1 17.08 ? CMB HEM 155 A 1 HETATM 20 C CAB HEM . . . C 3 13.264 0.029 13.625 1 9.69 ? CAB HEM 155 A 1 HETATM 21 C CBB HEM . . . C 3 12.981 -0.993 13 1 79.99 ? CBB HEM 155 A 1 HETATM 22 C C1C HEM . . . C 3 10.702 -2.087 16.702 1 8.99 ? C1C HEM 155 A 1 HETATM 23 C C2C HEM . . . C 3 9.509 -2.845 16.36 1 10.4 ? C2C HEM 155 A 1 HETATM 24 C C3C HEM . . . C 3 8.869 -3.076 17.51 1 14.46 ? C3C HEM 155 A 1 HETATM 25 C C4C HEM . . . C 3 9.655 -2.544 18.573 1 18.22 ? C4C HEM 155 A 1 HETATM 26 C CMC HEM . . . C 3 9.073 -3.156 14.917 1 5.98 ? CMC HEM 155 A 1 HETATM 27 C CAC HEM . . . C 3 7.581 -3.848 17.81 1 14.54 ? CAC HEM 155 A 1 HETATM 28 C CBC HEM . . . C 3 6.856 -4.269 16.852 1 18.73 ? CBC HEM 155 A 1 HETATM 29 C C1D HEM . . . C 3 10.094 -1.943 20.939 1 20.54 ? C1D HEM 155 A 1 HETATM 30 C C2D HEM . . . C 3 9.783 -2.196 22.353 1 13.1 ? C2D HEM 155 A 1 HETATM 31 C C3D HEM . . . C 3 10.471 -1.348 22.968 1 18.51 ? C3D HEM 155 A 1 HETATM 32 C C4D HEM . . . C 3 11.437 -0.737 21.969 1 17.91 ? C4D HEM 155 A 1 HETATM 33 C CMD HEM . . . C 3 8.579 -3.093 22.864 1 13.67 ? CMD HEM 155 A 1 HETATM 34 C CAD HEM . . . C 3 10.33 -0.966 24.457 1 22.55 ? CAD HEM 155 A 1 HETATM 35 C CBD HEM . . . C 3 9.558 0.307 24.636 1 30.76 ? CBD HEM 155 A 1 HETATM 36 C CGD HEM . . . C 3 9.42 0.64 26.227 1 44.86 ? CGD HEM 155 A 1 HETATM 37 O O1D HEM . . . C 3 8.453 0.296 26.785 1 44.45 ? O1D HEM 155 A 1 HETATM 38 O O2D HEM . . . C 3 10.236 1.157 26.782 1 52.45 ? O2D HEM 155 A 1 HETATM 39 N NA HEM . . . C 3 13.148 0.564 20.082 1 13.8 ? NA HEM 155 A 1 HETATM 40 N NB HEM . . . C 3 12.84 -0.201 17.488 1 9.15 ? NB HEM 155 A 1 HETATM 41 N NC HEM . . . C 3 10.854 -1.964 18.064 1 10.18 ? NC HEM 155 A 1 HETATM 42 N ND HEM . . . C 3 11.305 -1.248 20.737 1 17.22 ? ND HEM 155 A 1 HETATM 43 FE FE HEM . . . C 3 12.016 -0.715 19.104 1 15.76 ? FE HEM 155 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 427 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 43 #