data_1LJK # _model_server_result.job_id HXDaOo6Q1k1BOx9LNNQRnA _model_server_result.datetime_utc '2025-02-27 07:53:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ljk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":705}' # _entry.id 1LJK # _exptl.entry_id 1LJK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.68 _cell.angle_gamma 90 _cell.entry_id 1LJK _cell.length_a 28.066 _cell.length_b 62.936 _cell.length_c 60.406 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LJK _symmetry.cell_setting monoclinic _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,K 1 1 B,F,G,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.582 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.568 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? disulf ? disulf5 B SG CYS 6 B CYS 6 1_555 B SG CYS 127 B CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf6 B SG CYS 30 B CYS 30 1_555 B SG CYS 115 B CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf7 B SG CYS 64 B CYS 64 1_555 B SG CYS 80 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf8 B SG CYS 76 B CYS 76 1_555 B SG CYS 94 B CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 237 n n N O2 NO3 sing 238 n n N O3 NO3 sing 239 n n # _atom_sites.entry_id 1LJK _atom_sites.fract_transf_matrix[1][1] 0.03563 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000424 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015889 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016556 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NO3 A 1 701 701 NO3 NO3 . D 2 NO3 A 1 704 704 NO3 NO3 . E 2 NO3 A 1 707 707 NO3 NO3 . F 2 NO3 B 1 700 700 NO3 NO3 . G 2 NO3 B 1 702 702 NO3 NO3 . H 2 NO3 B 1 703 703 NO3 NO3 . I 2 NO3 B 1 705 705 NO3 NO3 . J 2 NO3 B 1 706 706 NO3 NO3 . K 3 HOH A 1 251 251 HOH HOH . K 3 HOH A 2 252 252 HOH HOH . K 3 HOH A 3 253 253 HOH HOH . K 3 HOH A 4 260 260 HOH HOH . K 3 HOH A 5 262 262 HOH HOH . K 3 HOH A 6 267 267 HOH HOH . K 3 HOH A 7 269 269 HOH HOH . K 3 HOH A 8 272 272 HOH HOH . K 3 HOH A 9 273 273 HOH HOH . K 3 HOH A 10 277 277 HOH HOH . K 3 HOH A 11 280 280 HOH HOH . K 3 HOH A 12 281 281 HOH HOH . K 3 HOH A 13 282 282 HOH HOH . K 3 HOH A 14 284 284 HOH HOH . K 3 HOH A 15 285 285 HOH HOH . K 3 HOH A 16 286 286 HOH HOH . K 3 HOH A 17 288 288 HOH HOH . K 3 HOH A 18 292 292 HOH HOH . K 3 HOH A 19 293 293 HOH HOH . K 3 HOH A 20 296 296 HOH HOH . K 3 HOH A 21 297 297 HOH HOH . K 3 HOH A 22 298 298 HOH HOH . K 3 HOH A 23 300 300 HOH HOH . K 3 HOH A 24 304 304 HOH HOH . K 3 HOH A 25 306 306 HOH HOH . K 3 HOH A 26 307 307 HOH HOH . K 3 HOH A 27 308 308 HOH HOH . K 3 HOH A 28 309 309 HOH HOH . K 3 HOH A 29 310 310 HOH HOH . K 3 HOH A 30 312 312 HOH HOH . K 3 HOH A 31 314 314 HOH HOH . K 3 HOH A 32 322 322 HOH HOH . K 3 HOH A 33 323 323 HOH HOH . K 3 HOH A 34 324 324 HOH HOH . K 3 HOH A 35 325 325 HOH HOH . K 3 HOH A 36 330 330 HOH HOH . K 3 HOH A 37 333 333 HOH HOH . K 3 HOH A 38 334 334 HOH HOH . K 3 HOH A 39 336 336 HOH HOH . K 3 HOH A 40 338 338 HOH HOH . K 3 HOH A 41 339 339 HOH HOH . K 3 HOH A 42 340 340 HOH HOH . K 3 HOH A 43 341 341 HOH HOH . K 3 HOH A 44 347 347 HOH HOH . K 3 HOH A 45 348 348 HOH HOH . K 3 HOH A 46 349 349 HOH HOH . K 3 HOH A 47 350 350 HOH HOH . K 3 HOH A 48 351 351 HOH HOH . K 3 HOH A 49 352 352 HOH HOH . K 3 HOH A 50 353 353 HOH HOH . K 3 HOH A 51 354 354 HOH HOH . K 3 HOH A 52 355 355 HOH HOH . K 3 HOH A 53 356 356 HOH HOH . K 3 HOH A 54 357 357 HOH HOH . K 3 HOH A 55 359 359 HOH HOH . K 3 HOH A 56 365 365 HOH HOH . K 3 HOH A 57 367 367 HOH HOH . K 3 HOH A 58 368 368 HOH HOH . K 3 HOH A 59 370 370 HOH HOH . K 3 HOH A 60 371 371 HOH HOH . K 3 HOH A 61 372 372 HOH HOH . K 3 HOH A 62 373 373 HOH HOH . K 3 HOH A 63 374 374 HOH HOH . K 3 HOH A 64 375 375 HOH HOH . K 3 HOH A 65 376 376 HOH HOH . K 3 HOH A 66 377 377 HOH HOH . K 3 HOH A 67 378 378 HOH HOH . K 3 HOH A 68 379 379 HOH HOH . K 3 HOH A 69 380 380 HOH HOH . K 3 HOH A 70 381 381 HOH HOH . K 3 HOH A 71 382 382 HOH HOH . K 3 HOH A 72 383 383 HOH HOH . K 3 HOH A 73 384 384 HOH HOH . K 3 HOH A 74 385 385 HOH HOH . K 3 HOH A 75 386 386 HOH HOH . K 3 HOH A 76 387 387 HOH HOH . K 3 HOH A 77 388 388 HOH HOH . K 3 HOH A 78 389 389 HOH HOH . K 3 HOH A 79 390 390 HOH HOH . K 3 HOH A 80 392 392 HOH HOH . K 3 HOH A 81 393 393 HOH HOH . K 3 HOH A 82 394 394 HOH HOH . K 3 HOH A 83 395 395 HOH HOH . K 3 HOH A 84 396 396 HOH HOH . K 3 HOH A 85 399 399 HOH HOH . K 3 HOH A 86 400 400 HOH HOH . K 3 HOH A 87 401 401 HOH HOH . K 3 HOH A 88 402 402 HOH HOH . K 3 HOH A 89 403 403 HOH HOH . K 3 HOH A 90 404 404 HOH HOH . K 3 HOH A 91 405 405 HOH HOH . K 3 HOH A 92 406 406 HOH HOH . K 3 HOH A 93 408 408 HOH HOH . K 3 HOH A 94 409 409 HOH HOH . K 3 HOH A 95 410 410 HOH HOH . K 3 HOH A 96 411 411 HOH HOH . K 3 HOH A 97 412 412 HOH HOH . K 3 HOH A 98 413 413 HOH HOH . K 3 HOH A 99 414 414 HOH HOH . K 3 HOH A 100 417 417 HOH HOH . K 3 HOH A 101 419 419 HOH HOH . K 3 HOH A 102 420 420 HOH HOH . K 3 HOH A 103 421 421 HOH HOH . K 3 HOH A 104 434 434 HOH HOH . K 3 HOH A 105 435 435 HOH HOH . K 3 HOH A 106 437 437 HOH HOH . K 3 HOH A 107 438 438 HOH HOH . K 3 HOH A 108 439 439 HOH HOH . K 3 HOH A 109 440 440 HOH HOH . K 3 HOH A 110 441 441 HOH HOH . K 3 HOH A 111 442 442 HOH HOH . K 3 HOH A 112 443 443 HOH HOH . K 3 HOH A 113 444 444 HOH HOH . K 3 HOH A 114 446 446 HOH HOH . K 3 HOH A 115 447 447 HOH HOH . K 3 HOH A 116 448 448 HOH HOH . K 3 HOH A 117 449 449 HOH HOH . K 3 HOH A 118 450 450 HOH HOH . K 3 HOH A 119 451 451 HOH HOH . K 3 HOH A 120 452 452 HOH HOH . K 3 HOH A 121 453 453 HOH HOH . K 3 HOH A 122 454 454 HOH HOH . K 3 HOH A 123 455 455 HOH HOH . K 3 HOH A 124 456 456 HOH HOH . K 3 HOH A 125 471 471 HOH HOH . K 3 HOH A 126 472 472 HOH HOH . K 3 HOH A 127 473 473 HOH HOH . K 3 HOH A 128 474 474 HOH HOH . K 3 HOH A 129 475 475 HOH HOH . K 3 HOH A 130 476 476 HOH HOH . K 3 HOH A 131 477 477 HOH HOH . K 3 HOH A 132 478 478 HOH HOH . K 3 HOH A 133 479 479 HOH HOH . K 3 HOH A 134 480 480 HOH HOH . K 3 HOH A 135 481 481 HOH HOH . K 3 HOH A 136 483 483 HOH HOH . K 3 HOH A 137 488 488 HOH HOH . K 3 HOH A 138 489 489 HOH HOH . K 3 HOH A 139 490 490 HOH HOH . K 3 HOH A 140 491 491 HOH HOH . K 3 HOH A 141 494 494 HOH HOH . L 3 HOH B 1 250 250 HOH HOH . L 3 HOH B 2 254 254 HOH HOH . L 3 HOH B 3 255 255 HOH HOH . L 3 HOH B 4 256 256 HOH HOH . L 3 HOH B 5 257 257 HOH HOH . L 3 HOH B 6 258 258 HOH HOH . L 3 HOH B 7 259 259 HOH HOH . L 3 HOH B 8 261 261 HOH HOH . L 3 HOH B 9 263 263 HOH HOH . L 3 HOH B 10 264 264 HOH HOH . L 3 HOH B 11 265 265 HOH HOH . L 3 HOH B 12 266 266 HOH HOH . L 3 HOH B 13 268 268 HOH HOH . L 3 HOH B 14 270 270 HOH HOH . L 3 HOH B 15 271 271 HOH HOH . L 3 HOH B 16 274 274 HOH HOH . L 3 HOH B 17 275 275 HOH HOH . L 3 HOH B 18 276 276 HOH HOH . L 3 HOH B 19 278 278 HOH HOH . L 3 HOH B 20 279 279 HOH HOH . L 3 HOH B 21 283 283 HOH HOH . L 3 HOH B 22 287 287 HOH HOH . L 3 HOH B 23 289 289 HOH HOH . L 3 HOH B 24 290 290 HOH HOH . L 3 HOH B 25 291 291 HOH HOH . L 3 HOH B 26 294 294 HOH HOH . L 3 HOH B 27 295 295 HOH HOH . L 3 HOH B 28 299 299 HOH HOH . L 3 HOH B 29 301 301 HOH HOH . L 3 HOH B 30 302 302 HOH HOH . L 3 HOH B 31 303 303 HOH HOH . L 3 HOH B 32 305 305 HOH HOH . L 3 HOH B 33 311 311 HOH HOH . L 3 HOH B 34 313 313 HOH HOH . L 3 HOH B 35 315 315 HOH HOH . L 3 HOH B 36 316 316 HOH HOH . L 3 HOH B 37 317 317 HOH HOH . L 3 HOH B 38 318 318 HOH HOH . L 3 HOH B 39 319 319 HOH HOH . L 3 HOH B 40 320 320 HOH HOH . L 3 HOH B 41 321 321 HOH HOH . L 3 HOH B 42 326 326 HOH HOH . L 3 HOH B 43 327 327 HOH HOH . L 3 HOH B 44 328 328 HOH HOH . L 3 HOH B 45 329 329 HOH HOH . L 3 HOH B 46 331 331 HOH HOH . L 3 HOH B 47 332 332 HOH HOH . L 3 HOH B 48 335 335 HOH HOH . L 3 HOH B 49 337 337 HOH HOH . L 3 HOH B 50 342 342 HOH HOH . L 3 HOH B 51 343 343 HOH HOH . L 3 HOH B 52 344 344 HOH HOH . L 3 HOH B 53 345 345 HOH HOH . L 3 HOH B 54 346 346 HOH HOH . L 3 HOH B 55 358 358 HOH HOH . L 3 HOH B 56 360 360 HOH HOH . L 3 HOH B 57 361 361 HOH HOH . L 3 HOH B 58 362 362 HOH HOH . L 3 HOH B 59 363 363 HOH HOH . L 3 HOH B 60 364 364 HOH HOH . L 3 HOH B 61 366 366 HOH HOH . L 3 HOH B 62 369 369 HOH HOH . L 3 HOH B 63 391 391 HOH HOH . L 3 HOH B 64 397 397 HOH HOH . L 3 HOH B 65 398 398 HOH HOH . L 3 HOH B 66 407 407 HOH HOH . L 3 HOH B 67 415 415 HOH HOH . L 3 HOH B 68 416 416 HOH HOH . L 3 HOH B 69 418 418 HOH HOH . L 3 HOH B 70 422 422 HOH HOH . L 3 HOH B 71 423 423 HOH HOH . L 3 HOH B 72 424 424 HOH HOH . L 3 HOH B 73 425 425 HOH HOH . L 3 HOH B 74 426 426 HOH HOH . L 3 HOH B 75 427 427 HOH HOH . L 3 HOH B 76 428 428 HOH HOH . L 3 HOH B 77 429 429 HOH HOH . L 3 HOH B 78 430 430 HOH HOH . L 3 HOH B 79 431 431 HOH HOH . L 3 HOH B 80 432 432 HOH HOH . L 3 HOH B 81 433 433 HOH HOH . L 3 HOH B 82 436 436 HOH HOH . L 3 HOH B 83 445 445 HOH HOH . L 3 HOH B 84 457 457 HOH HOH . L 3 HOH B 85 458 458 HOH HOH . L 3 HOH B 86 459 459 HOH HOH . L 3 HOH B 87 460 460 HOH HOH . L 3 HOH B 88 461 461 HOH HOH . L 3 HOH B 89 462 462 HOH HOH . L 3 HOH B 90 463 463 HOH HOH . L 3 HOH B 91 464 464 HOH HOH . L 3 HOH B 92 465 465 HOH HOH . L 3 HOH B 93 466 466 HOH HOH . L 3 HOH B 94 467 467 HOH HOH . L 3 HOH B 95 468 468 HOH HOH . L 3 HOH B 96 469 469 HOH HOH . L 3 HOH B 97 470 470 HOH HOH . L 3 HOH B 98 482 482 HOH HOH . L 3 HOH B 99 484 484 HOH HOH . L 3 HOH B 100 485 485 HOH HOH . L 3 HOH B 101 486 486 HOH HOH . L 3 HOH B 102 487 487 HOH HOH . L 3 HOH B 103 492 492 HOH HOH . L 3 HOH B 104 493 493 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . I 2 14.065 18.92 40.571 1 40.24 ? N NO3 705 B 1 HETATM 2 O O1 NO3 . . . I 2 14.673 18.499 39.563 1 40.35 ? O1 NO3 705 B 1 HETATM 3 O O2 NO3 . . . I 2 14.604 19.758 41.223 1 39.45 ? O2 NO3 705 B 1 HETATM 4 O O3 NO3 . . . I 2 12.977 18.45 40.81 1 40.02 ? O3 NO3 705 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #