data_1LJO # _model_server_result.job_id 1EY_i13j01yV6I1LQdsH-A _model_server_result.datetime_utc '2024-10-18 14:29:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ljo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 1LJO # _exptl.entry_id 1LJO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.052 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1LJO _cell.length_a 58.42 _cell.length_b 58.42 _cell.length_c 32.084 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LJO _symmetry.cell_setting ? _symmetry.Int_Tables_number 168 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 6' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 5 'crystal symmetry operation' 5_555 y,-x+y,z 0.5 0.866025 0 -0.866025 0.5 0 0 0 1 0 0 0 6 'crystal symmetry operation' 6_555 x-y,x,z 0.5 -0.866025 0 0.866025 0.5 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # _chem_comp.formula 'C2 H4 O2' _chem_comp.formula_weight 60.052 _chem_comp.id ACY _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACY doub 1 n n C OXT ACY sing 2 n n C CH3 ACY sing 3 n n OXT HXT ACY sing 4 n n CH3 H1 ACY sing 5 n n CH3 H2 ACY sing 6 n n CH3 H3 ACY sing 7 n n # _atom_sites.entry_id 1LJO _atom_sites.fract_transf_matrix[1][1] 0.017117 _atom_sites.fract_transf_matrix[1][2] 0.009883 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019766 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.031168 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CD A 1 78 76 CD CD . C 3 ACY A 1 201 201 ACY ACY . D 3 ACY A 1 202 202 ACY ACY . E 3 ACY A 1 203 203 ACY ACY . F 4 HOH A 1 307 307 HOH HOH . F 4 HOH A 2 309 309 HOH HOH . F 4 HOH A 3 316 316 HOH HOH . F 4 HOH A 4 317 317 HOH HOH . F 4 HOH A 5 319 319 HOH HOH . F 4 HOH A 6 320 320 HOH HOH . F 4 HOH A 7 323 323 HOH HOH . F 4 HOH A 8 324 324 HOH HOH . F 4 HOH A 9 330 330 HOH HOH . F 4 HOH A 10 377 377 HOH HOH . F 4 HOH A 11 382 382 HOH HOH . F 4 HOH A 12 385 385 HOH HOH . F 4 HOH A 13 387 387 HOH HOH . F 4 HOH A 14 398 398 HOH HOH . F 4 HOH A 15 401 401 HOH HOH . F 4 HOH A 16 404 404 HOH HOH . F 4 HOH A 17 405 405 HOH HOH . F 4 HOH A 18 409 409 HOH HOH . F 4 HOH A 19 411 411 HOH HOH . F 4 HOH A 20 415 415 HOH HOH . F 4 HOH A 21 421 421 HOH HOH . F 4 HOH A 22 422 422 HOH HOH . F 4 HOH A 23 424 424 HOH HOH . F 4 HOH A 24 426 426 HOH HOH . F 4 HOH A 25 428 428 HOH HOH . F 4 HOH A 26 430 430 HOH HOH . F 4 HOH A 27 431 431 HOH HOH . F 4 HOH A 28 436 436 HOH HOH . F 4 HOH A 29 442 442 HOH HOH . F 4 HOH A 30 443 443 HOH HOH . F 4 HOH A 31 444 444 HOH HOH . F 4 HOH A 32 445 445 HOH HOH . F 4 HOH A 33 446 446 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACY . . . C 3 0.588 16.434 11.242 1 51.6 ? C ACY 201 A 1 HETATM 2 O O ACY . . . C 3 1.289 16.199 10.168 1 52.86 ? O ACY 201 A 1 HETATM 3 O OXT ACY . . . C 3 -0.447 15.802 11.65 1 51.61 ? OXT ACY 201 A 1 HETATM 4 C CH3 ACY . . . C 3 1.113 17.604 12.057 1 51.74 ? CH3 ACY 201 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #